RNA–Protein interactions for RNA: ENST00000522658.5

PABPC1-220, Transcript of poly(A) binding protein cytoplasmic 1, humanhuman

TSL 2

Gene PABPC1, Length 736 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPC1-220ENST00000522658 KCPQ6ZWJ8 1503 aa8.48□□□□□ -1.05
PABPC1-220ENST00000522658 KIF13BQ9NQT8 1826 aa8.47□□□□□ -1.05
PABPC1-220ENST00000522658 TNRC6CQ9HCJ0 1690 aaKnown RBP8.47□□□□□ -1.05
PABPC1-220ENST00000522658 ITGA6P23229 1130 aa8.47□□□□□ -1.05
PABPC1-220ENST00000522658 ADD1P35611 737 aaKnown RBP8.47□□□□□ -1.05
PABPC1-220ENST00000522658 CRKLP46109 303 aaKnown RBP8.47□□□□□ -1.05
PABPC1-220ENST00000522658 NPM2Q86SE8 214 aaKnown RBP8.47□□□□□ -1.05
PABPC1-220ENST00000522658 KLRG1Q96E93 195 aa8.47□□□□□ -1.05
PABPC1-220ENST00000522658 ZNF831Q5JPB2 1677 aa8.46□□□□□ -1.05
PABPC1-220ENST00000522658 ERVH48-1M5A8F1 160 aa8.46□□□□□ -1.06
PABPC1-220ENST00000522658 ADH1AP07327 375 aa8.46□□□□□ -1.06
PABPC1-220ENST00000522658 RFC5P40937 340 aa8.46□□□□□ -1.06
PABPC1-220ENST00000522658 TNS4Q8IZW8 715 aa8.46□□□□□ -1.06
PABPC1-220ENST00000522658 ZNF395Q9H8N7 513 aaPredicted RBP8.46□□□□□ -1.06
PABPC1-220ENST00000522658 POLKQ9UBT6 870 aa8.46□□□□□ -1.06
PABPC1-220ENST00000522658 COL5A3P25940 1745 aaPredicted RBP8.46□□□□□ -1.06
PABPC1-220ENST00000522658 FOXD4L5Q5VV16 416 aaPredicted RBP8.45□□□□□ -1.06
PABPC1-220ENST00000522658 MORC1Q86VD1 984 aa8.45□□□□□ -1.06
PABPC1-220ENST00000522658 TRIM34Q9BYJ4 488 aa8.45□□□□□ -1.06
PABPC1-220ENST00000522658 RRAGCQ9HB90 399 aa8.45□□□□□ -1.06
PABPC1-220ENST00000522658 USP42Q9H9J4 1324 aaKnown RBP8.45□□□□□ -1.06
PABPC1-220ENST00000522658 ARFGEF1Q9Y6D6 1849 aa8.45□□□□□ -1.06
PABPC1-220ENST00000522658 KIAA1551Q9HCM1 1747 aa8.44□□□□□ -1.06
PABPC1-220ENST00000522658 SLURP2P0DP57 97 aa8.44□□□□□ -1.06
PABPC1-220ENST00000522658 ZNF385CQ66K41 422 aaPredicted RBP8.44□□□□□ -1.06
PABPC1-220ENST00000522658 VWA5B2Q8N398 1253 aa8.44□□□□□ -1.06
PABPC1-220ENST00000522658 PNMA1Q8ND90 353 aa8.44□□□□□ -1.06
PABPC1-220ENST00000522658 POLMQ9NP87 494 aaPredicted RBP8.44□□□□□ -1.06
PABPC1-220ENST00000522658 SRP68Q9UHB9 627 aaKnown RBP8.44□□□□□ -1.06
PABPC1-220ENST00000522658 ADAMTS8Q9UP79 889 aa8.44□□□□□ -1.06
PABPC1-220ENST00000522658 KDM6AO15550 1401 aaPredicted RBP8.44□□□□□ -1.06
PABPC1-220ENST00000522658 CHRNA5P30532 468 aa8.43□□□□□ -1.06
PABPC1-220ENST00000522658 PTGIRP43119 386 aa8.43□□□□□ -1.06
PABPC1-220ENST00000522658 RASSF7Q02833 373 aa8.43□□□□□ -1.06
PABPC1-220ENST00000522658 SULT6B1Q6IMI4 303 aa8.43□□□□□ -1.06
PABPC1-220ENST00000522658 DZIP3Q86Y13 1208 aaKnown RBP8.43□□□□□ -1.06
PABPC1-220ENST00000522658 TTC5Q8N0Z6 440 aa8.43□□□□□ -1.06
PABPC1-220ENST00000522658 GOPCQ9HD26 462 aa8.43□□□□□ -1.06
PABPC1-220ENST00000522658 COL15A1P39059 1388 aa8.43□□□□□ -1.06
PABPC1-220ENST00000522658 BRCA1P38398 1863 aaKnown RBP8.43□□□□□ -1.06
PABPC1-220ENST00000522658 H0YIN7 160 aa8.42□□□□□ -1.06
PABPC1-220ENST00000522658 POLRMTO00411 1230 aaKnown RBP8.42□□□□□ -1.06
PABPC1-220ENST00000522658 VEGFAP15692 232 aaPredicted RBP8.42□□□□□ -1.06
PABPC1-220ENST00000522658 LMNB1P20700 586 aa8.42□□□□□ -1.06
PABPC1-220ENST00000522658 RAB15P59190 212 aa8.42□□□□□ -1.06
PABPC1-220ENST00000522658 HTRA3P83110 453 aa8.42□□□□□ -1.06
PABPC1-220ENST00000522658 USPL1Q5W0Q7 1092 aa8.42□□□□□ -1.06
PABPC1-220ENST00000522658 SV2AQ7L0J3 742 aa8.42□□□□□ -1.06
PABPC1-220ENST00000522658 NFATC2IPQ8NCF5 419 aa8.42□□□□□ -1.06
PABPC1-220ENST00000522658 SLC4A9Q96Q91 983 aa8.42□□□□□ -1.06
PABPC1-220ENST00000522658 ZNF330Q9Y3S2 320 aaPredicted RBP8.42□□□□□ -1.06
PABPC1-220ENST00000522658 KNSTRNQ9Y448 316 aa8.42□□□□□ -1.06
PABPC1-220ENST00000522658 ARHGEF15O94989 841 aa8.41□□□□□ -1.06
PABPC1-220ENST00000522658 EIF4G2P78344 907 aaKnown RBP eCLIP8.41□□□□□ -1.06
PABPC1-220ENST00000522658 DDR1Q08345 913 aa8.41□□□□□ -1.06
PABPC1-220ENST00000522658 AKAP4Q5JQC9 854 aa8.41□□□□□ -1.06
PABPC1-220ENST00000522658 DNAJC5GQ8N7S2 189 aa8.41□□□□□ -1.06
PABPC1-220ENST00000522658 TTLL6Q8N841 843 aa8.41□□□□□ -1.06
PABPC1-220ENST00000522658 JMYQ8N9B5 988 aa8.41□□□□□ -1.06
PABPC1-220ENST00000522658 WHAMMQ8TF30 809 aa8.41□□□□□ -1.06
PABPC1-220ENST00000522658 TIMELESSQ9UNS1 1208 aa8.41□□□□□ -1.06
PABPC1-220ENST00000522658 TJP1Q07157 1748 aa8.4□□□□□ -1.06
PABPC1-220ENST00000522658 TIAM2Q8IVF5 1701 aa8.4□□□□□ -1.06
PABPC1-220ENST00000522658 SOS1Q07889 1333 aaPredicted RBP8.4□□□□□ -1.06
PABPC1-220ENST00000522658 A0A087WZG4 1122 aa8.4□□□□□ -1.06
PABPC1-220ENST00000522658 LOC100996750A0A140TA64 210 aa8.4□□□□□ -1.06
PABPC1-220ENST00000522658 GLTPD2A6NH11 291 aa8.4□□□□□ -1.06
PABPC1-220ENST00000522658 STARD3NLO95772 234 aa8.4□□□□□ -1.06
PABPC1-220ENST00000522658 HSPA1AP0DMV8 641 aaKnown RBP8.4□□□□□ -1.06
PABPC1-220ENST00000522658 HSPA1BP0DMV9 641 aaKnown RBP8.4□□□□□ -1.06
PABPC1-220ENST00000522658 KCNA3P22001 575 aa8.4□□□□□ -1.06
PABPC1-220ENST00000522658 COL13A1Q5TAT6 717 aaPredicted RBP8.4□□□□□ -1.06
PABPC1-220ENST00000522658 BICDL1Q6ZP65 573 aa8.4□□□□□ -1.06
PABPC1-220ENST00000522658 C2CD5Q86YS7 1000 aa8.4□□□□□ -1.06
PABPC1-220ENST00000522658 AEBP1Q8IUX7 1158 aa8.4□□□□□ -1.06
PABPC1-220ENST00000522658 DNAJC10Q8IXB1 793 aa8.4□□□□□ -1.06
PABPC1-220ENST00000522658 ZNF622Q969S3 477 aaKnown RBP eCLIP8.4□□□□□ -1.06
PABPC1-220ENST00000522658 AIDAQ96BJ3 306 aa8.4□□□□□ -1.06
PABPC1-220ENST00000522658 KRTAP4-6Q9BYQ5 205 aa8.4□□□□□ -1.06
PABPC1-220ENST00000522658 PANK3Q9H999 370 aa8.4□□□□□ -1.06
PABPC1-220ENST00000522658 SLC52A2Q9HAB3 445 aa8.4□□□□□ -1.06
PABPC1-220ENST00000522658 CDC14CA4D256 554 aa8.39□□□□□ -1.07
PABPC1-220ENST00000522658 SERPINB2P05120 415 aa8.39□□□□□ -1.07
PABPC1-220ENST00000522658 CANXP27824 592 aaKnown RBP8.39□□□□□ -1.07
PABPC1-220ENST00000522658 ST5P78524 1137 aa8.39□□□□□ -1.07
PABPC1-220ENST00000522658 CUEDC1Q9NWM3 386 aaPredicted RBP8.39□□□□□ -1.07
PABPC1-220ENST00000522658 NARFQ9UHQ1 456 aa8.39□□□□□ -1.07
PABPC1-220ENST00000522658 ZBTB1Q9Y2K1 713 aa8.39□□□□□ -1.07
PABPC1-220ENST00000522658 PDE6BP35913 854 aa8.38□□□□□ -1.07
PABPC1-220ENST00000522658 RNF144AP50876 292 aaPredicted RBP8.38□□□□□ -1.07
PABPC1-220ENST00000522658 PRELPP51888 382 aa8.38□□□□□ -1.07
PABPC1-220ENST00000522658 TEFQ10587 303 aa8.38□□□□□ -1.07
PABPC1-220ENST00000522658 TRIM26Q12899 539 aaPredicted RBP8.38□□□□□ -1.07
PABPC1-220ENST00000522658 NFIXQ14938 502 aa8.38□□□□□ -1.07
PABPC1-220ENST00000522658 TMEM259Q4ZIN3 620 aa8.38□□□□□ -1.07
PABPC1-220ENST00000522658 SOGA3Q5TF21 947 aa8.38□□□□□ -1.07
PABPC1-220ENST00000522658 LYSMD3Q7Z3D4 306 aa8.38□□□□□ -1.07
PABPC1-220ENST00000522658 SVOPQ8N4V2 548 aa8.38□□□□□ -1.07
PABPC1-220ENST00000522658 KCTD17Q8N5Z5 321 aa8.38□□□□□ -1.07
PABPC1-220ENST00000522658 SCN11AQ9UI33 1791 aa8.38□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms