RNA–Protein interactions for RNA: ENST00000522556.1

CLK4-211, Transcript of CDC like kinase 4, humanhuman

TSL 1 (best)

Gene CLK4, Length 1,249 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK4-211ENST00000522556 FBXO3Q9UK99 471 aa22.22■■□□□ 1.15
CLK4-211ENST00000522556 ADM5C9JUS6 153 aa22.21■■□□□ 1.15
CLK4-211ENST00000522556 SASH1O94885 1247 aa22.21■■□□□ 1.15
CLK4-211ENST00000522556 IL15P40933 162 aaPredicted RBP22.21■■□□□ 1.15
CLK4-211ENST00000522556 POLA2Q14181 598 aa22.21■■□□□ 1.15
CLK4-211ENST00000522556 MVPQ14764 893 aaKnown RBP22.21■■□□□ 1.15
CLK4-211ENST00000522556 ATP2B3Q16720 1220 aa22.21■■□□□ 1.15
CLK4-211ENST00000522556 CEP126Q9P2H0 1117 aa22.21■■□□□ 1.15
CLK4-211ENST00000522556 MYO3BQ8WXR4 1341 aa22.21■■□□□ 1.15
CLK4-211ENST00000522556 TFCP2Q12800 502 aa22.2■■□□□ 1.14
CLK4-211ENST00000522556 CHAF1AQ13111 956 aaPredicted RBP22.2■■□□□ 1.14
CLK4-211ENST00000522556 NBPF9Q3BBW0 867 aa22.2■■□□□ 1.14
CLK4-211ENST00000522556 ZC3H15Q8WU90 426 aaKnown RBP22.2■■□□□ 1.14
CLK4-211ENST00000522556 LPIN2Q92539 896 aa22.2■■□□□ 1.14
CLK4-211ENST00000522556 AOX1Q06278 1338 aa22.2■■□□□ 1.14
CLK4-211ENST00000522556 FAM205AQ6ZU69 1335 aa22.2■■□□□ 1.14
CLK4-211ENST00000522556 IFIT1P09914 478 aaKnown RBP22.19■■□□□ 1.14
CLK4-211ENST00000522556 SLC5A1P13866 664 aa22.19■■□□□ 1.14
CLK4-211ENST00000522556 ATP8B2P98198 1209 aa22.19■■□□□ 1.14
CLK4-211ENST00000522556 SCARF1Q14162 830 aa22.19■■□□□ 1.14
CLK4-211ENST00000522556 CST9Q5W186 159 aa22.19■■□□□ 1.14
CLK4-211ENST00000522556 USP48Q86UV5 1035 aa22.19■■□□□ 1.14
CLK4-211ENST00000522556 ANGEL2Q5VTE6 544 aaKnown RBP22.18■■□□□ 1.14
CLK4-211ENST00000522556 CEP85Q6P2H3 762 aa22.18■■□□□ 1.14
CLK4-211ENST00000522556 VPS37DQ86XT2 251 aa22.18■■□□□ 1.14
CLK4-211ENST00000522556 SSH3Q8TE77 659 aa22.18■■□□□ 1.14
CLK4-211ENST00000522556 CREBZFQ9NS37 354 aa22.18■■□□□ 1.14
CLK4-211ENST00000522556 ECM29Q5VYK3 1845 aa22.17■■□□□ 1.14
CLK4-211ENST00000522556 TMEM88BA6NKF7 163 aa22.17■■□□□ 1.14
CLK4-211ENST00000522556 WNT10BO00744 389 aa22.17■■□□□ 1.14
CLK4-211ENST00000522556 PHKA1P46020 1223 aa22.17■■□□□ 1.14
CLK4-211ENST00000522556 TIMM10P62072 90 aa22.17■■□□□ 1.14
CLK4-211ENST00000522556 CAVIN4Q5BKX8 364 aa22.17■■□□□ 1.14
CLK4-211ENST00000522556 MFSD14BQ5SR56 506 aa22.17■■□□□ 1.14
CLK4-211ENST00000522556 KRT26Q7Z3Y9 468 aa22.17■■□□□ 1.14
CLK4-211ENST00000522556 KLRG1Q96E93 195 aa22.16■■□□□ 1.14
CLK4-211ENST00000522556 ZBED3Q96IU2 234 aaPredicted RBP22.16■■□□□ 1.14
CLK4-211ENST00000522556 ZNF408Q9H9D4 720 aa22.16■■□□□ 1.14
CLK4-211ENST00000522556 MKRN1Q9UHC7 482 aaKnown RBP22.16■■□□□ 1.14
CLK4-211ENST00000522556 A0A1B0GUL7 405 aa22.15■■□□□ 1.14
CLK4-211ENST00000522556 FKBP1AP62942 108 aaKnown RBP22.15■■□□□ 1.14
CLK4-211ENST00000522556 CDC37L1Q7L3B6 337 aa22.15■■□□□ 1.14
CLK4-211ENST00000522556 OGFOD1Q8N543 542 aa22.15■■□□□ 1.14
CLK4-211ENST00000522556 CELF2O95319 508 aaKnown RBP22.14■■□□□ 1.13
CLK4-211ENST00000522556 MS4A1P11836 297 aa22.14■■□□□ 1.13
CLK4-211ENST00000522556 DCPSQ96C86 337 aaKnown RBP22.14■■□□□ 1.13
CLK4-211ENST00000522556 ZBTB40Q9NUA8 1239 aa22.14■■□□□ 1.13
CLK4-211ENST00000522556 FRAT2O75474 233 aaPredicted RBP22.13■■□□□ 1.13
CLK4-211ENST00000522556 DDX19BQ9UMR2 479 aa22.13■■□□□ 1.13
CLK4-211ENST00000522556 SURF6O75683 361 aaKnown RBP22.12■■□□□ 1.13
CLK4-211ENST00000522556 G3BP1Q13283 466 aaKnown RBP eCLIP22.12■■□□□ 1.13
CLK4-211ENST00000522556 CFAP100Q494V2 611 aa22.12■■□□□ 1.13
CLK4-211ENST00000522556 PRAMEF18Q5VWM3 479 aa22.12■■□□□ 1.13
CLK4-211ENST00000522556 SIRT2Q8IXJ6 389 aa22.12■■□□□ 1.13
CLK4-211ENST00000522556 HDAC9Q9UKV0 1011 aa22.12■■□□□ 1.13
CLK4-211ENST00000522556 TTF2Q9UNY4 1162 aaKnown RBP22.12■■□□□ 1.13
CLK4-211ENST00000522556 CNTNAP1P78357 1384 aa22.12■■□□□ 1.13
CLK4-211ENST00000522556 PDE3AQ14432 1141 aa22.11■■□□□ 1.13
CLK4-211ENST00000522556 CCDC102BQ68D86 513 aa22.11■■□□□ 1.13
CLK4-211ENST00000522556 XAGE2Q96GT9 111 aa22.11■■□□□ 1.13
CLK4-211ENST00000522556 CLRN2A0PK11 232 aa22.1■■□□□ 1.13
CLK4-211ENST00000522556 SULF1Q8IWU6 871 aa22.1■■□□□ 1.13
CLK4-211ENST00000522556 CDCA5Q96FF9 252 aa22.1■■□□□ 1.13
CLK4-211ENST00000522556 PRMT6Q96LA8 375 aaPredicted RBP22.1■■□□□ 1.13
CLK4-211ENST00000522556 ABT1Q9ULW3 272 aaKnown RBP22.1■■□□□ 1.13
CLK4-211ENST00000522556 EXOC6BQ9Y2D4 811 aa22.1■■□□□ 1.13
CLK4-211ENST00000522556 SPDYE2BA6NHP3 402 aa22.09■■□□□ 1.13
CLK4-211ENST00000522556 SPDYE6P0CI01 402 aa22.09■■□□□ 1.13
CLK4-211ENST00000522556 RRP1P56182 461 aaKnown RBP22.09■■□□□ 1.13
CLK4-211ENST00000522556 OS9Q13438 667 aaPredicted RBP22.09■■□□□ 1.13
CLK4-211ENST00000522556 RASGRF1Q13972 1273 aa22.09■■□□□ 1.13
CLK4-211ENST00000522556 DLGAP5Q15398 846 aa22.09■■□□□ 1.13
CLK4-211ENST00000522556 NEUROD6Q96NK8 337 aa22.09■■□□□ 1.13
CLK4-211ENST00000522556 NOP58Q9Y2X3 529 aaKnown RBP22.09■■□□□ 1.13
CLK4-211ENST00000522556 PITPNM2Q9BZ72 1349 aa22.08■■□□□ 1.13
CLK4-211ENST00000522556 PI16Q6UXB8 463 aa22.08■■□□□ 1.13
CLK4-211ENST00000522556 GOLGA6L2Q8N9W4 650 aaPredicted RBP22.08■■□□□ 1.13
CLK4-211ENST00000522556 RASSF10A6NK89 507 aa22.07■■□□□ 1.12
CLK4-211ENST00000522556 PRDX5P30044 214 aa22.07■■□□□ 1.12
CLK4-211ENST00000522556 RBM5P52756 815 aaKnown RBP eCLIP22.07■■□□□ 1.12
CLK4-211ENST00000522556 TNNI3KQ59H18 835 aa22.07■■□□□ 1.12
CLK4-211ENST00000522556 MTMR14Q8NCE2 650 aa22.07■■□□□ 1.12
CLK4-211ENST00000522556 TLR7Q9NYK1 1049 aaKnown RBP22.07■■□□□ 1.12
CLK4-211ENST00000522556 AKAP2Q9Y2D5 859 aa22.07■■□□□ 1.12
CLK4-211ENST00000522556 TLL2Q9Y6L7 1015 aa22.07■■□□□ 1.12
CLK4-211ENST00000522556 FPGT-TNNI3KV9GXZ4 949 aa22.07■■□□□ 1.12
CLK4-211ENST00000522556 CRKP46108 304 aa22.06■■□□□ 1.12
CLK4-211ENST00000522556 VEGFBP49765 207 aa22.06■■□□□ 1.12
CLK4-211ENST00000522556 JMYQ8N9B5 988 aa22.06■■□□□ 1.12
CLK4-211ENST00000522556 TBC1D22AQ8WUA7 517 aa22.06■■□□□ 1.12
CLK4-211ENST00000522556 DBNDD2Q9BQY9 259 aa22.06■■□□□ 1.12
CLK4-211ENST00000522556 SAPCD2Q86UD0 394 aa22.05■■□□□ 1.12
CLK4-211ENST00000522556 AKAP11Q9UKA4 1901 aa22.05■■□□□ 1.12
CLK4-211ENST00000522556 THSD7BQ9C0I4 1608 aa22.05■■□□□ 1.12
CLK4-211ENST00000522556 SSC5DA1L4H1 1573 aa22.04■■□□□ 1.12
CLK4-211ENST00000522556 CYP4F22Q6NT55 531 aa22.04■■□□□ 1.12
CLK4-211ENST00000522556 MOB2Q70IA6 237 aa22.04■■□□□ 1.12
CLK4-211ENST00000522556 TDRD3Q9H7E2 651 aaKnown RBP22.04■■□□□ 1.12
CLK4-211ENST00000522556 MYO5AQ9Y4I1 1855 aaKnown RBP22.03■■□□□ 1.12
CLK4-211ENST00000522556 PAPPA2Q9BXP8 1791 aa22.03■■□□□ 1.12
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms