RNA–Protein interactions for RNA: ENST00000522515.5

LSM1-204, Transcript of LSM1 homolog, mRNA degradation associated, humanhuman

TSL 3

Gene LSM1, Length 1,568 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM1-204ENST00000522515 SNRKQ9NRH2 765 aa19.86■□□□□ 0.77
LSM1-204ENST00000522515 NDUFB9Q9Y6M9 179 aa19.86■□□□□ 0.77
LSM1-204ENST00000522515 AKAP11Q9UKA4 1901 aa19.85■□□□□ 0.77
LSM1-204ENST00000522515 GLRX3O76003 335 aaKnown RBP19.85■□□□□ 0.77
LSM1-204ENST00000522515 JDP2Q8WYK2 163 aa19.85■□□□□ 0.77
LSM1-204ENST00000522515 AOX1Q06278 1338 aa19.85■□□□□ 0.77
LSM1-204ENST00000522515 MYH13Q9UKX3 1938 aa19.84■□□□□ 0.77
LSM1-204ENST00000522515 SEMA3EO15041 775 aa19.84■□□□□ 0.77
LSM1-204ENST00000522515 ZBTB22O15209 634 aa19.84■□□□□ 0.77
LSM1-204ENST00000522515 SPATA5Q8NB90 893 aa19.84■□□□□ 0.77
LSM1-204ENST00000522515 DENND2AQ9ULE3 1009 aa19.84■□□□□ 0.77
LSM1-204ENST00000522515 JAG2Q9Y219 1238 aa19.84■□□□□ 0.77
LSM1-204ENST00000522515 SCN9AQ15858 1988 aa19.84■□□□□ 0.77
LSM1-204ENST00000522515 ZAP70P43403 619 aa19.83■□□□□ 0.77
LSM1-204ENST00000522515 CHAF1AQ13111 956 aaPredicted RBP19.83■□□□□ 0.77
LSM1-204ENST00000522515 DNAJC2Q99543 621 aaKnown RBP19.83■□□□□ 0.77
LSM1-204ENST00000522515 HAUS7Q99871 368 aa19.83■□□□□ 0.77
LSM1-204ENST00000522515 ZNRF3Q9ULT6 936 aa19.83■□□□□ 0.77
LSM1-204ENST00000522515 DICER1Q9UPY3 1922 aaKnown RBP19.83■□□□□ 0.76
LSM1-204ENST00000522515 GTF2IP78347 998 aa19.83■□□□□ 0.76
LSM1-204ENST00000522515 EDC3Q96F86 508 aaKnown RBP19.83■□□□□ 0.76
LSM1-204ENST00000522515 RNF181Q9P0P0 153 aa19.83■□□□□ 0.76
LSM1-204ENST00000522515 MAP4K4O95819 1239 aaPredicted RBP19.82■□□□□ 0.76
LSM1-204ENST00000522515 TTC22Q5TAA0 569 aa19.82■□□□□ 0.76
LSM1-204ENST00000522515 C9orf131Q5VYM1 1079 aa19.82■□□□□ 0.76
LSM1-204ENST00000522515 PDS5AQ29RF7 1337 aaKnown RBP19.81■□□□□ 0.76
LSM1-204ENST00000522515 FAM205AQ6ZU69 1335 aa19.81■□□□□ 0.76
LSM1-204ENST00000522515 DCAF8L1A6NGE4 600 aa19.81■□□□□ 0.76
LSM1-204ENST00000522515 CYP2E1P05181 493 aaPredicted RBP19.81■□□□□ 0.76
LSM1-204ENST00000522515 GSPT1P15170 499 aaKnown RBP19.81■□□□□ 0.76
LSM1-204ENST00000522515 TTLL5Q6EMB2 1281 aa19.81■□□□□ 0.76
LSM1-204ENST00000522515 FBXW7Q969H0 707 aa19.81■□□□□ 0.76
LSM1-204ENST00000522515 ANTXR1Q9H6X2 564 aa19.81■□□□□ 0.76
LSM1-204ENST00000522515 FZD9O00144 591 aa19.8■□□□□ 0.76
LSM1-204ENST00000522515 GOLIM4O00461 696 aa19.8■□□□□ 0.76
LSM1-204ENST00000522515 RAD17O75943 681 aa19.8■□□□□ 0.76
LSM1-204ENST00000522515 TBC1D9Q6ZT07 1266 aa19.8■□□□□ 0.76
LSM1-204ENST00000522515 PAG1Q9NWQ8 432 aa19.8■□□□□ 0.76
LSM1-204ENST00000522515 ZNF646O15015 1829 aaPredicted RBP19.8■□□□□ 0.76
LSM1-204ENST00000522515 USP17L3A6NCW0 530 aa19.79■□□□□ 0.76
LSM1-204ENST00000522515 USP17L4A6NCW7 530 aa19.79■□□□□ 0.76
LSM1-204ENST00000522515 CXCL9Q07325 125 aa19.79■□□□□ 0.76
LSM1-204ENST00000522515 STRIP1Q5VSL9 837 aa19.79■□□□□ 0.76
LSM1-204ENST00000522515 USP17L1Q7RTZ2 530 aa19.79■□□□□ 0.76
LSM1-204ENST00000522515 TIAM2Q8IVF5 1701 aa19.79■□□□□ 0.76
LSM1-204ENST00000522515 DACT2Q5SW24 774 aa19.78■□□□□ 0.76
LSM1-204ENST00000522515 WDR66Q8TBY9 1149 aa19.78■□□□□ 0.76
LSM1-204ENST00000522515 MXD3Q9BW11 206 aa19.78■□□□□ 0.76
LSM1-204ENST00000522515 PSME4Q14997 1843 aa19.78■□□□□ 0.76
LSM1-204ENST00000522515 PSMD14O00487 310 aa19.78■□□□□ 0.76
LSM1-204ENST00000522515 PIH1D3Q9NQM4 214 aaKnown RBP19.78■□□□□ 0.76
LSM1-204ENST00000522515 SALL1Q9NSC2 1324 aa19.77■□□□□ 0.76
LSM1-204ENST00000522515 TRIM6-TRIM34B2RNG4 842 aa19.77■□□□□ 0.76
LSM1-204ENST00000522515 EIF6P56537 245 aaKnown RBP19.77■□□□□ 0.76
LSM1-204ENST00000522515 MFSD14BQ5SR56 506 aa19.77■□□□□ 0.76
LSM1-204ENST00000522515 CIAPIN1Q6FI81 312 aa19.77■□□□□ 0.76
LSM1-204ENST00000522515 CERS5Q8N5B7 392 aa19.77■□□□□ 0.76
LSM1-204ENST00000522515 ABCF2Q9UG63 623 aa19.77■□□□□ 0.76
LSM1-204ENST00000522515 ZNF541Q9H0D2 1346 aa19.76■□□□□ 0.75
LSM1-204ENST00000522515 VIL1P09327 827 aaKnown RBP19.76■□□□□ 0.75
LSM1-204ENST00000522515 SDSP20132 328 aa19.76■□□□□ 0.75
LSM1-204ENST00000522515 GRIK5Q16478 980 aa19.76■□□□□ 0.75
LSM1-204ENST00000522515 TBC1D22AQ8WUA7 517 aa19.76■□□□□ 0.75
LSM1-204ENST00000522515 MYO5AQ9Y4I1 1855 aaKnown RBP19.76■□□□□ 0.75
LSM1-204ENST00000522515 PRDX5P30044 214 aa19.75■□□□□ 0.75
LSM1-204ENST00000522515 TTF1Q15361 905 aaPredicted RBP19.75■□□□□ 0.75
LSM1-204ENST00000522515 RILPL2Q969X0 211 aa19.75■□□□□ 0.75
LSM1-204ENST00000522515 EVI5LQ96CN4 794 aa19.75■□□□□ 0.75
LSM1-204ENST00000522515 TNIP1Q15025 636 aa19.74■□□□□ 0.75
LSM1-204ENST00000522515 BMP2KLQ5H9B9 411 aa19.74■□□□□ 0.75
LSM1-204ENST00000522515 RSBN1LQ6PCB5 846 aaPredicted RBP19.74■□□□□ 0.75
LSM1-204ENST00000522515 CNTROBQ8N137 903 aa19.74■□□□□ 0.75
LSM1-204ENST00000522515 ZGPATQ8N5A5 531 aaKnown RBP19.74■□□□□ 0.75
LSM1-204ENST00000522515 KBTBD3Q8NAB2 608 aa19.74■□□□□ 0.75
LSM1-204ENST00000522515 LRP2BPQ9P2M1 347 aa19.74■□□□□ 0.75
LSM1-204ENST00000522515 DOCK2Q92608 1830 aa19.74■□□□□ 0.75
LSM1-204ENST00000522515 IDH1O75874 414 aaKnown RBP19.74■□□□□ 0.75
LSM1-204ENST00000522515 FKBP1AP62942 108 aaKnown RBP19.74■□□□□ 0.75
LSM1-204ENST00000522515 ZBTB12Q9Y330 459 aaPredicted RBP19.74■□□□□ 0.75
LSM1-204ENST00000522515 GJA3Q9Y6H8 435 aa19.73■□□□□ 0.75
LSM1-204ENST00000522515 LDHBP07195 334 aaKnown RBP19.72■□□□□ 0.75
LSM1-204ENST00000522515 SPTY2D1Q68D10 685 aaPredicted RBP19.72■□□□□ 0.75
LSM1-204ENST00000522515 ERICH6Q7L0X2 663 aa19.72■□□□□ 0.75
LSM1-204ENST00000522515 GMLQ99445 158 aa19.72■□□□□ 0.75
LSM1-204ENST00000522515 FSD1Q9BTV5 496 aa19.72■□□□□ 0.75
LSM1-204ENST00000522515 RAI14Q9P0K7 980 aa19.72■□□□□ 0.75
LSM1-204ENST00000522515 F8W031 263 aaPredicted RBP19.71■□□□□ 0.75
LSM1-204ENST00000522515 CHGBP05060 677 aa19.71■□□□□ 0.75
LSM1-204ENST00000522515 KIAA0825Q8IV33 1275 aa19.71■□□□□ 0.75
LSM1-204ENST00000522515 SUGT1Q9Y2Z0 365 aa19.71■□□□□ 0.75
LSM1-204ENST00000522515 AK9Q5TCS8 1911 aa19.71■□□□□ 0.75
LSM1-204ENST00000522515 MYO3BQ8WXR4 1341 aa19.71■□□□□ 0.75
LSM1-204ENST00000522515 ZC3H4Q9UPT8 1303 aaKnown RBP19.71■□□□□ 0.75
LSM1-204ENST00000522515 MECOMQ03112 1051 aa19.7■□□□□ 0.74
LSM1-204ENST00000522515 MAP3K12Q12852 859 aa19.7■□□□□ 0.74
LSM1-204ENST00000522515 GPC2Q8N158 579 aa19.7■□□□□ 0.74
LSM1-204ENST00000522515 AGBL3Q8NEM8 1001 aa19.7■□□□□ 0.74
LSM1-204ENST00000522515 ZNF384Q8TF68 577 aa19.7■□□□□ 0.74
LSM1-204ENST00000522515 DDNO94850 711 aaPredicted RBP19.7■□□□□ 0.74
LSM1-204ENST00000522515 NSUN4Q96CB9 384 aaKnown RBP19.7■□□□□ 0.74
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms