RNA–Protein interactions for RNA: ENST00000522163.5

RUNX1T1-240, Transcript of RUNX1 translocation partner 1, human

TSL 5

Gene RUNX1T1, Length 631 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
RUNX1T1-240	ENST00000522163	COL1A1	P02452	1464 aa	Predicted RBP	11.86	□□□□□ -0.51
RUNX1T1-240	ENST00000522163		F8W031	263 aa	Predicted RBP	11.85	□□□□□ -0.51
RUNX1T1-240	ENST00000522163	MYO1B	O43795	1136 aa		11.85	□□□□□ -0.51
RUNX1T1-240	ENST00000522163	CTSW	P56202	376 aa		11.85	□□□□□ -0.51
RUNX1T1-240	ENST00000522163	TAF1C	Q15572	869 aa	Predicted RBP	11.85	□□□□□ -0.51
RUNX1T1-240	ENST00000522163	TTLL11	Q8NHH1	800 aa		11.85	□□□□□ -0.51
RUNX1T1-240	ENST00000522163	GREM2	Q9H772	168 aa		11.85	□□□□□ -0.51
RUNX1T1-240	ENST00000522163	ZNF804B	A4D1E1	1349 aa		11.85	□□□□□ -0.51
RUNX1T1-240	ENST00000522163	SSC5D	A1L4H1	1573 aa		11.84	□□□□□ -0.51
RUNX1T1-240	ENST00000522163	KLRK1	P26718	216 aa		11.84	□□□□□ -0.51
RUNX1T1-240	ENST00000522163	KIF22	Q14807	665 aa		11.84	□□□□□ -0.51
RUNX1T1-240	ENST00000522163	CFAP100	Q494V2	611 aa		11.84	□□□□□ -0.51
RUNX1T1-240	ENST00000522163	MTMR14	Q8NCE2	650 aa		11.84	□□□□□ -0.51
RUNX1T1-240	ENST00000522163	MS4A4A	Q96JQ5	239 aa		11.84	□□□□□ -0.51
RUNX1T1-240	ENST00000522163	PRMT6	Q96LA8	375 aa	Predicted RBP	11.84	□□□□□ -0.51
RUNX1T1-240	ENST00000522163	SZT2	Q5T011	3432 aa		11.84	□□□□□ -0.51
RUNX1T1-240	ENST00000522163	CCL15-CCL14	A0A0B4J2E2	113 aa		11.83	□□□□□ -0.52
RUNX1T1-240	ENST00000522163	IGHMBP2	P38935	993 aa	Known RBP	11.83	□□□□□ -0.52
RUNX1T1-240	ENST00000522163	KCNJ4	P48050	445 aa		11.83	□□□□□ -0.52
RUNX1T1-240	ENST00000522163	RBM5	P52756	815 aa	Known RBP eCLIP	11.83	□□□□□ -0.52
RUNX1T1-240	ENST00000522163	RASA3	Q14644	834 aa		11.83	□□□□□ -0.52
RUNX1T1-240	ENST00000522163	CCL15	Q16663	113 aa		11.83	□□□□□ -0.52
RUNX1T1-240	ENST00000522163	BRI3BP	Q8WY22	251 aa		11.83	□□□□□ -0.52
RUNX1T1-240	ENST00000522163	METTL22	Q9BUU2	404 aa	Predicted RBP	11.83	□□□□□ -0.52
RUNX1T1-240	ENST00000522163	ARHGAP39	Q9C0H5	1083 aa		11.83	□□□□□ -0.52
RUNX1T1-240	ENST00000522163	CD209	Q9NNX6	404 aa		11.83	□□□□□ -0.52
RUNX1T1-240	ENST00000522163	ELL2	O00472	640 aa	Predicted RBP	11.82	□□□□□ -0.52
RUNX1T1-240	ENST00000522163	APAF1	O14727	1248 aa		11.82	□□□□□ -0.52
RUNX1T1-240	ENST00000522163	WDHD1	O75717	1129 aa	Predicted RBP	11.82	□□□□□ -0.52
RUNX1T1-240	ENST00000522163	ECM2	O94769	699 aa	Predicted RBP	11.82	□□□□□ -0.52
RUNX1T1-240	ENST00000522163	GTF2A2	P52657	109 aa		11.82	□□□□□ -0.52
RUNX1T1-240	ENST00000522163	FAM43A	Q8N2R8	423 aa		11.82	□□□□□ -0.52
RUNX1T1-240	ENST00000522163	CERS5	Q8N5B7	392 aa		11.82	□□□□□ -0.52
RUNX1T1-240	ENST00000522163	CNKSR2	Q8WXI2	1034 aa		11.82	□□□□□ -0.52
RUNX1T1-240	ENST00000522163	ANKRD2	Q9GZV1	360 aa		11.82	□□□□□ -0.52
RUNX1T1-240	ENST00000522163	SPDYE2B	A6NHP3	402 aa		11.81	□□□□□ -0.52
RUNX1T1-240	ENST00000522163	DDX58	O95786	925 aa	Known RBP	11.81	□□□□□ -0.52
RUNX1T1-240	ENST00000522163	SPDYE6	P0CI01	402 aa		11.81	□□□□□ -0.52
RUNX1T1-240	ENST00000522163	MTFR1	Q15390	333 aa		11.81	□□□□□ -0.52
RUNX1T1-240	ENST00000522163	MPHOSPH8	Q99549	860 aa		11.81	□□□□□ -0.52
RUNX1T1-240	ENST00000522163	HTATIP2	Q9BUP3	242 aa		11.81	□□□□□ -0.52
RUNX1T1-240	ENST00000522163	MBIP	Q9NS73	344 aa		11.81	□□□□□ -0.52
RUNX1T1-240	ENST00000522163	MAP3K2	Q9Y2U5	619 aa		11.81	□□□□□ -0.52
RUNX1T1-240	ENST00000522163	ZNF853	P0CG23	659 aa		11.8	□□□□□ -0.52
RUNX1T1-240	ENST00000522163	LACTB	P83111	547 aa	Predicted RBP	11.8	□□□□□ -0.52
RUNX1T1-240	ENST00000522163	CALD1	Q05682	793 aa	Known RBP	11.8	□□□□□ -0.52
RUNX1T1-240	ENST00000522163	PPP1R3F	Q6ZSY5	799 aa	Predicted RBP	11.8	□□□□□ -0.52
RUNX1T1-240	ENST00000522163	NKX2-3	Q8TAU0	364 aa		11.8	□□□□□ -0.52
RUNX1T1-240	ENST00000522163	SHISA4	Q96DD7	197 aa		11.8	□□□□□ -0.52
RUNX1T1-240	ENST00000522163	NR2E3	Q9Y5X4	410 aa		11.8	□□□□□ -0.52
RUNX1T1-240	ENST00000522163	ZNF646	O15015	1829 aa	Predicted RBP	11.8	□□□□□ -0.52
RUNX1T1-240	ENST00000522163	AOX1	Q06278	1338 aa		11.8	□□□□□ -0.52
RUNX1T1-240	ENST00000522163	TLR2	O60603	784 aa		11.79	□□□□□ -0.52
RUNX1T1-240	ENST00000522163	GNRH1	P01148	92 aa		11.79	□□□□□ -0.52
RUNX1T1-240	ENST00000522163	PRMT2	P55345	433 aa		11.79	□□□□□ -0.52
RUNX1T1-240	ENST00000522163	GNAI1	P63096	354 aa		11.79	□□□□□ -0.52
RUNX1T1-240	ENST00000522163	MAP3K9	P80192	1104 aa		11.79	□□□□□ -0.52
RUNX1T1-240	ENST00000522163	CHRND	Q07001	517 aa		11.79	□□□□□ -0.52
RUNX1T1-240	ENST00000522163	PRO3102	Q9H379	93 aa		11.79	□□□□□ -0.52
RUNX1T1-240	ENST00000522163	IFT57	Q9NWB7	429 aa		11.79	□□□□□ -0.52
RUNX1T1-240	ENST00000522163	JAG2	Q9Y219	1238 aa		11.79	□□□□□ -0.52
RUNX1T1-240	ENST00000522163	CSAD	Q9Y600	493 aa		11.79	□□□□□ -0.52
RUNX1T1-240	ENST00000522163	SNAP23	O00161	211 aa		11.78	□□□□□ -0.52
RUNX1T1-240	ENST00000522163	SOX1	O00570	391 aa	Predicted RBP	11.78	□□□□□ -0.52
RUNX1T1-240	ENST00000522163	TAF5L	O75529	589 aa		11.78	□□□□□ -0.52
RUNX1T1-240	ENST00000522163	IGKV5-2	P06315	115 aa		11.78	□□□□□ -0.52
RUNX1T1-240	ENST00000522163	ITGA6	P23229	1130 aa		11.78	□□□□□ -0.52
RUNX1T1-240	ENST00000522163	ZEB1	P37275	1124 aa	Predicted RBP	11.78	□□□□□ -0.52
RUNX1T1-240	ENST00000522163	MNX1	P50219	401 aa	Predicted RBP	11.78	□□□□□ -0.52
RUNX1T1-240	ENST00000522163	TNFAIP1	Q13829	316 aa		11.78	□□□□□ -0.52
RUNX1T1-240	ENST00000522163	VGLL4	Q14135	290 aa		11.78	□□□□□ -0.52
RUNX1T1-240	ENST00000522163	LAMB1	P07942	1786 aa		11.77	□□□□□ -0.52
RUNX1T1-240	ENST00000522163	TCP10L2	B9ZVM9	353 aa		11.77	□□□□□ -0.53
RUNX1T1-240	ENST00000522163	ZBTB7B	O15156	539 aa	Predicted RBP	11.77	□□□□□ -0.53
RUNX1T1-240	ENST00000522163	CETP	P11597	493 aa		11.77	□□□□□ -0.53
RUNX1T1-240	ENST00000522163	CCL5	P13501	91 aa		11.77	□□□□□ -0.53
RUNX1T1-240	ENST00000522163	GJA8	P48165	433 aa		11.77	□□□□□ -0.53
RUNX1T1-240	ENST00000522163	NEXN	Q0ZGT2	675 aa		11.77	□□□□□ -0.53
RUNX1T1-240	ENST00000522163	CWF19L2	Q2TBE0	894 aa	Known RBP	11.77	□□□□□ -0.53
RUNX1T1-240	ENST00000522163	KSR2	Q6VAB6	950 aa		11.77	□□□□□ -0.53
RUNX1T1-240	ENST00000522163	CDAN1	Q8IWY9	1227 aa		11.77	□□□□□ -0.53
RUNX1T1-240	ENST00000522163	HELB	Q8NG08	1087 aa	Predicted RBP	11.77	□□□□□ -0.53
RUNX1T1-240	ENST00000522163	RAET1E	Q8TD07	263 aa		11.77	□□□□□ -0.53
RUNX1T1-240	ENST00000522163	LRCH3	Q96II8	777 aa		11.77	□□□□□ -0.53
RUNX1T1-240	ENST00000522163	RNF208	Q9H0X6	261 aa		11.77	□□□□□ -0.53
RUNX1T1-240	ENST00000522163	TDRD3	Q9H7E2	651 aa	Known RBP	11.77	□□□□□ -0.53
RUNX1T1-240	ENST00000522163	BIN2	Q9UBW5	565 aa	Predicted RBP	11.77	□□□□□ -0.53
RUNX1T1-240	ENST00000522163	ZNF70	Q9UC06	446 aa	Predicted RBP	11.77	□□□□□ -0.53
RUNX1T1-240	ENST00000522163	SPEF2	Q9C093	1822 aa		11.76	□□□□□ -0.53
RUNX1T1-240	ENST00000522163	PI4KAP2	A4QPH2	592 aa		11.76	□□□□□ -0.53
RUNX1T1-240	ENST00000522163	BTBD19	C9JJ37	291 aa		11.76	□□□□□ -0.53
RUNX1T1-240	ENST00000522163	FMNL1	O95466	1100 aa	Predicted RBP	11.76	□□□□□ -0.53
RUNX1T1-240	ENST00000522163	GJB1	P08034	283 aa		11.76	□□□□□ -0.53
RUNX1T1-240	ENST00000522163	IL1R1	P14778	569 aa		11.76	□□□□□ -0.53
RUNX1T1-240	ENST00000522163	HOXD10	P28358	340 aa		11.76	□□□□□ -0.53
RUNX1T1-240	ENST00000522163	GRK4	P32298	578 aa		11.76	□□□□□ -0.53
RUNX1T1-240	ENST00000522163	PSMC4	P43686	418 aa		11.76	□□□□□ -0.53
RUNX1T1-240	ENST00000522163	FKBP1A	P62942	108 aa	Known RBP	11.76	□□□□□ -0.53
RUNX1T1-240	ENST00000522163	SPDYE2	Q495Y8	402 aa		11.76	□□□□□ -0.53
RUNX1T1-240	ENST00000522163	CCDC184	Q52MB2	194 aa		11.76	□□□□□ -0.53

Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms