RNA–Protein interactions for RNA: ENST00000522013.5

CTNNA1-232, Transcript of catenin alpha 1, humanhuman

TSL 3

Gene CTNNA1, Length 874 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-232ENST00000522013 HDGFL2Q7Z4V5 671 aaPredicted RBP6.99□□□□□ -1.29
CTNNA1-232ENST00000522013 SLC17A8Q8NDX2 589 aa6.99□□□□□ -1.29
CTNNA1-232ENST00000522013 ARMC2Q8NEN0 867 aa6.99□□□□□ -1.29
CTNNA1-232ENST00000522013 ZNF622Q969S3 477 aaKnown RBP eCLIP6.99□□□□□ -1.29
CTNNA1-232ENST00000522013 MTRQ99707 1265 aa6.99□□□□□ -1.29
CTNNA1-232ENST00000522013 ARHGAP9Q9BRR9 750 aa6.99□□□□□ -1.29
CTNNA1-232ENST00000522013 ATG3Q9NT62 314 aa6.99□□□□□ -1.29
CTNNA1-232ENST00000522013 HCSTQ9UBK5 93 aa6.99□□□□□ -1.29
CTNNA1-232ENST00000522013 RNF123Q5XPI4 1314 aa6.99□□□□□ -1.29
CTNNA1-232ENST00000522013 TJP1Q07157 1748 aa6.98□□□□□ -1.29
CTNNA1-232ENST00000522013 ZPR1O75312 459 aa6.98□□□□□ -1.29
CTNNA1-232ENST00000522013 RASA1P20936 1047 aa6.98□□□□□ -1.29
CTNNA1-232ENST00000522013 RC3H1Q5TC82 1133 aaKnown RBP6.98□□□□□ -1.29
CTNNA1-232ENST00000522013 CIAPIN1Q6FI81 312 aa6.98□□□□□ -1.29
CTNNA1-232ENST00000522013 PNMA8AQ86V59 439 aaPredicted RBP6.98□□□□□ -1.29
CTNNA1-232ENST00000522013 CCDC24Q8N4L8 307 aa6.98□□□□□ -1.29
CTNNA1-232ENST00000522013 ZNF516Q92618 1163 aa6.98□□□□□ -1.29
CTNNA1-232ENST00000522013 KCTD12Q96CX2 325 aaKnown RBP6.98□□□□□ -1.29
CTNNA1-232ENST00000522013 COG3Q96JB2 828 aa6.98□□□□□ -1.29
CTNNA1-232ENST00000522013 GNEQ9Y223 722 aaKnown RBP6.98□□□□□ -1.29
CTNNA1-232ENST00000522013 MKI67P46013 3256 aaKnown RBP6.98□□□□□ -1.29
CTNNA1-232ENST00000522013 RTL1A6NKG5 1358 aa6.97□□□□□ -1.29
CTNNA1-232ENST00000522013 CARMIL3Q8ND23 1372 aa6.97□□□□□ -1.29
CTNNA1-232ENST00000522013 CLDN10P78369 228 aa6.97□□□□□ -1.29
CTNNA1-232ENST00000522013 RRS1Q15050 365 aaKnown RBP6.97□□□□□ -1.29
CTNNA1-232ENST00000522013 SH3RF1Q7Z6J0 888 aa6.97□□□□□ -1.29
CTNNA1-232ENST00000522013 CCDC85AQ96PX6 553 aaPredicted RBP6.97□□□□□ -1.29
CTNNA1-232ENST00000522013 SLC4A9Q96Q91 983 aa6.97□□□□□ -1.29
CTNNA1-232ENST00000522013 CARD14Q9BXL6 1004 aa6.97□□□□□ -1.29
CTNNA1-232ENST00000522013 TLL2Q9Y6L7 1015 aa6.97□□□□□ -1.29
CTNNA1-232ENST00000522013 ZNF541Q9H0D2 1346 aa6.97□□□□□ -1.29
CTNNA1-232ENST00000522013 CUL9Q8IWT3 2517 aa6.96□□□□□ -1.29
CTNNA1-232ENST00000522013 TRIOBPQ9H2D6 2365 aa6.96□□□□□ -1.29
CTNNA1-232ENST00000522013 CRKLP46109 303 aaKnown RBP6.96□□□□□ -1.3
CTNNA1-232ENST00000522013 C4orf48Q5BLP8 95 aa6.96□□□□□ -1.3
CTNNA1-232ENST00000522013 USPL1Q5W0Q7 1092 aa6.96□□□□□ -1.3
CTNNA1-232ENST00000522013 BICDL1Q6ZP65 573 aa6.96□□□□□ -1.3
CTNNA1-232ENST00000522013 ZNF594Q96JF6 807 aaPredicted RBP6.96□□□□□ -1.3
CTNNA1-232ENST00000522013 KIAA1024Q9UPX6 916 aa6.96□□□□□ -1.3
CTNNA1-232ENST00000522013 SPG7Q9UQ90 795 aa6.96□□□□□ -1.3
CTNNA1-232ENST00000522013 LTBP3Q9NS15 1303 aa6.96□□□□□ -1.3
CTNNA1-232ENST00000522013 ANKRD26Q9UPS8 1709 aa6.96□□□□□ -1.3
CTNNA1-232ENST00000522013 A0A1W2PP64 1363 aa6.95□□□□□ -1.3
CTNNA1-232ENST00000522013 BCORQ6W2J9 1755 aa6.95□□□□□ -1.3
CTNNA1-232ENST00000522013 KIF20BQ96Q89 1820 aa6.95□□□□□ -1.3
CTNNA1-232ENST00000522013 MAGEB6P1A0A0J9YX57 407 aa6.95□□□□□ -1.3
CTNNA1-232ENST00000522013 ATP5J2-PTCD1G3V325 749 aa6.95□□□□□ -1.3
CTNNA1-232ENST00000522013 TRAF5O00463 557 aa6.95□□□□□ -1.3
CTNNA1-232ENST00000522013 DKK1O94907 266 aa6.95□□□□□ -1.3
CTNNA1-232ENST00000522013 SERPINB2P05120 415 aa6.95□□□□□ -1.3
CTNNA1-232ENST00000522013 TM4SF1P30408 202 aa6.95□□□□□ -1.3
CTNNA1-232ENST00000522013 SCNN1AP37088 669 aa6.95□□□□□ -1.3
CTNNA1-232ENST00000522013 DPYDQ12882 1025 aa6.95□□□□□ -1.3
CTNNA1-232ENST00000522013 NFIXQ14938 502 aa6.95□□□□□ -1.3
CTNNA1-232ENST00000522013 CCDC27Q2M243 656 aa6.95□□□□□ -1.3
CTNNA1-232ENST00000522013 LINC01559Q495D7 138 aa6.95□□□□□ -1.3
CTNNA1-232ENST00000522013 TJAP1Q5JTD0 557 aa6.95□□□□□ -1.3
CTNNA1-232ENST00000522013 ZBTB33Q86T24 672 aa6.95□□□□□ -1.3
CTNNA1-232ENST00000522013 ANKMY2Q8IV38 441 aa6.95□□□□□ -1.3
CTNNA1-232ENST00000522013 OGFOD1Q8N543 542 aa6.95□□□□□ -1.3
CTNNA1-232ENST00000522013 FOXJ1Q92949 421 aa6.95□□□□□ -1.3
CTNNA1-232ENST00000522013 ZNF408Q9H9D4 720 aa6.95□□□□□ -1.3
CTNNA1-232ENST00000522013 PTCD1O75127 700 aaKnown RBP6.94□□□□□ -1.3
CTNNA1-232ENST00000522013 RBM25P49756 843 aaKnown RBP6.94□□□□□ -1.3
CTNNA1-232ENST00000522013 MCCD1P59942 119 aaPredicted RBP6.94□□□□□ -1.3
CTNNA1-232ENST00000522013 EML3Q32P44 896 aa6.94□□□□□ -1.3
CTNNA1-232ENST00000522013 CST9Q5W186 159 aa6.94□□□□□ -1.3
CTNNA1-232ENST00000522013 B4GALNT3Q6L9W6 998 aa6.94□□□□□ -1.3
CTNNA1-232ENST00000522013 CTU1Q7Z7A3 348 aaKnown RBP6.94□□□□□ -1.3
CTNNA1-232ENST00000522013 DZIP3Q86Y13 1208 aaKnown RBP6.94□□□□□ -1.3
CTNNA1-232ENST00000522013 NKX2-3Q8TAU0 364 aa6.94□□□□□ -1.3
CTNNA1-232ENST00000522013 FAM200AQ8TCP9 573 aa6.94□□□□□ -1.3
CTNNA1-232ENST00000522013 BAP1Q92560 729 aa6.94□□□□□ -1.3
CTNNA1-232ENST00000522013 CLP1Q92989 425 aaKnown RBP6.94□□□□□ -1.3
CTNNA1-232ENST00000522013 SLC6A16Q9GZN6 736 aa6.94□□□□□ -1.3
CTNNA1-232ENST00000522013 SLC12A5Q9H2X9 1139 aa6.94□□□□□ -1.3
CTNNA1-232ENST00000522013 TERF2IPQ9NYB0 399 aa6.94□□□□□ -1.3
CTNNA1-232ENST00000522013 POLR2AP24928 1970 aaKnown RBP6.94□□□□□ -1.3
CTNNA1-232ENST00000522013 PAPPA2Q9BXP8 1791 aa6.93□□□□□ -1.3
CTNNA1-232ENST00000522013 NPHP1O15259 732 aa6.93□□□□□ -1.3
CTNNA1-232ENST00000522013 CELF2O95319 508 aaKnown RBP6.93□□□□□ -1.3
CTNNA1-232ENST00000522013 S1PR4O95977 384 aa6.93□□□□□ -1.3
CTNNA1-232ENST00000522013 MAP7D1Q3KQU3 841 aa6.93□□□□□ -1.3
CTNNA1-232ENST00000522013 HSP90AB2PQ58FF8 381 aa6.93□□□□□ -1.3
CTNNA1-232ENST00000522013 SAPCD2Q86UD0 394 aa6.93□□□□□ -1.3
CTNNA1-232ENST00000522013 IFNL2Q8IZJ0 200 aa6.93□□□□□ -1.3
CTNNA1-232ENST00000522013 ZNF592Q92610 1267 aa6.93□□□□□ -1.3
CTNNA1-232ENST00000522013 DOLKQ9UPQ8 538 aa6.93□□□□□ -1.3
CTNNA1-232ENST00000522013 GJA3Q9Y6H8 435 aa6.93□□□□□ -1.3
CTNNA1-232ENST00000522013 A0A0C4DFX4 3053 aa6.93□□□□□ -1.3
CTNNA1-232ENST00000522013 KIAA0100Q14667 2235 aaKnown RBP6.93□□□□□ -1.3
CTNNA1-232ENST00000522013 SZT2Q5T011 3432 aa6.92□□□□□ -1.3
CTNNA1-232ENST00000522013 CEP290O15078 2479 aa6.92□□□□□ -1.3
CTNNA1-232ENST00000522013 ZBTB7BO15156 539 aaPredicted RBP6.92□□□□□ -1.3
CTNNA1-232ENST00000522013 LZTS3O60299 673 aaPredicted RBP6.92□□□□□ -1.3
CTNNA1-232ENST00000522013 PHKG2P15735 406 aa6.92□□□□□ -1.3
CTNNA1-232ENST00000522013 PDE6BP35913 854 aa6.92□□□□□ -1.3
CTNNA1-232ENST00000522013 NOGQ13253 232 aa6.92□□□□□ -1.3
CTNNA1-232ENST00000522013 OXLD1Q5BKU9 147 aa6.92□□□□□ -1.3
CTNNA1-232ENST00000522013 SOGA3Q5TF21 947 aa6.92□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 12.5 ms