RNA–Protein interactions for RNA: ENST00000521798.1

SPIDR-215, Transcript of scaffold protein involved in DNA repair, humanhuman

TSL 3

Gene SPIDR, Length 647 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPIDR-215ENST00000521798 SSBP05455 408 aaKnown RBP eCLIP9.96□□□□□ -0.82
SPIDR-215ENST00000521798 XRCC5P13010 732 aaKnown RBP9.96□□□□□ -0.82
SPIDR-215ENST00000521798 HSD3B2P26439 372 aa9.96□□□□□ -0.82
SPIDR-215ENST00000521798 GRM2Q14416 872 aa9.96□□□□□ -0.82
SPIDR-215ENST00000521798 BTLAQ7Z6A9 289 aa9.96□□□□□ -0.82
SPIDR-215ENST00000521798 MKL1Q969V6 931 aa9.96□□□□□ -0.82
SPIDR-215ENST00000521798 AIDAQ96BJ3 306 aa9.96□□□□□ -0.82
SPIDR-215ENST00000521798 UHRF1BP1Q6BDS2 1440 aa9.96□□□□□ -0.82
SPIDR-215ENST00000521798 PREX1Q8TCU6 1659 aa9.96□□□□□ -0.82
SPIDR-215ENST00000521798 RNF144AP50876 292 aaPredicted RBP9.95□□□□□ -0.82
SPIDR-215ENST00000521798 HSPA2P54652 639 aa9.95□□□□□ -0.82
SPIDR-215ENST00000521798 PWP1Q13610 501 aa9.95□□□□□ -0.82
SPIDR-215ENST00000521798 TTF2Q9UNY4 1162 aaKnown RBP9.95□□□□□ -0.82
SPIDR-215ENST00000521798 MRPL42Q9Y6G3 142 aaKnown RBP9.95□□□□□ -0.82
SPIDR-215ENST00000521798 CEP152O94986 1710 aa9.94□□□□□ -0.82
SPIDR-215ENST00000521798 LMTK2Q8IWU2 1503 aa9.94□□□□□ -0.82
SPIDR-215ENST00000521798 SPATA31C2B4DYI2 1134 aa9.94□□□□□ -0.82
SPIDR-215ENST00000521798 EREGO14944 169 aa9.94□□□□□ -0.82
SPIDR-215ENST00000521798 WDR4P57081 412 aaKnown RBP9.94□□□□□ -0.82
SPIDR-215ENST00000521798 NFX1Q12986 1120 aaKnown RBP9.94□□□□□ -0.82
SPIDR-215ENST00000521798 GPATCH3Q96I76 525 aa9.94□□□□□ -0.82
SPIDR-215ENST00000521798 ZNF408Q9H9D4 720 aa9.94□□□□□ -0.82
SPIDR-215ENST00000521798 ADAMTS1Q9UHI8 967 aa9.94□□□□□ -0.82
SPIDR-215ENST00000521798 CAMSAP1Q5T5Y3 1602 aa9.93□□□□□ -0.82
SPIDR-215ENST00000521798 NAIPQ13075 1403 aa9.93□□□□□ -0.82
SPIDR-215ENST00000521798 ARHGAP31Q2M1Z3 1444 aa9.93□□□□□ -0.82
SPIDR-215ENST00000521798 KANK1Q14678 1352 aa9.93□□□□□ -0.82
SPIDR-215ENST00000521798 ATP4AP20648 1035 aa9.93□□□□□ -0.82
SPIDR-215ENST00000521798 VEGFBP49765 207 aa9.93□□□□□ -0.82
SPIDR-215ENST00000521798 BICDL1Q6ZP65 573 aa9.93□□□□□ -0.82
SPIDR-215ENST00000521798 C1orf127Q8N9H9 656 aa9.93□□□□□ -0.82
SPIDR-215ENST00000521798 C3orf58Q8NDZ4 430 aa9.93□□□□□ -0.82
SPIDR-215ENST00000521798 UNC13BO14795 1591 aa9.92□□□□□ -0.82
SPIDR-215ENST00000521798 HFM1A2PYH4 1435 aa9.92□□□□□ -0.82
SPIDR-215ENST00000521798 TNRQ92752 1358 aa9.92□□□□□ -0.82
SPIDR-215ENST00000521798 TIMP2P16035 220 aa9.92□□□□□ -0.82
SPIDR-215ENST00000521798 NASPP49321 788 aaPredicted RBP9.92□□□□□ -0.82
SPIDR-215ENST00000521798 KIAA0319Q5VV43 1072 aa9.92□□□□□ -0.82
SPIDR-215ENST00000521798 MEIOBQ8N635 442 aa9.92□□□□□ -0.82
SPIDR-215ENST00000521798 GLIS3Q8NEA6 775 aa9.92□□□□□ -0.82
SPIDR-215ENST00000521798 PMEPA1Q969W9 287 aa9.92□□□□□ -0.82
SPIDR-215ENST00000521798 CWC22Q9HCG8 908 aaKnown RBP9.92□□□□□ -0.82
SPIDR-215ENST00000521798 STRIP2Q9ULQ0 834 aa9.92□□□□□ -0.82
SPIDR-215ENST00000521798 TRAK1Q9UPV9 953 aa9.92□□□□□ -0.82
SPIDR-215ENST00000521798 MYO3AQ8NEV4 1616 aa9.92□□□□□ -0.82
SPIDR-215ENST00000521798 SPATA31D1Q6ZQQ2 1576 aa9.92□□□□□ -0.82
SPIDR-215ENST00000521798 ERVK-7P63135 1459 aa9.91□□□□□ -0.82
SPIDR-215ENST00000521798 CLSTN1O94985 981 aa9.91□□□□□ -0.82
SPIDR-215ENST00000521798 EPB42P16452 691 aa9.91□□□□□ -0.82
SPIDR-215ENST00000521798 GRNP28799 593 aaKnown RBP9.91□□□□□ -0.82
SPIDR-215ENST00000521798 SLC19A1P41440 591 aa9.91□□□□□ -0.82
SPIDR-215ENST00000521798 PTPROQ16827 1216 aa9.91□□□□□ -0.82
SPIDR-215ENST00000521798 RELL1Q8IUW5 271 aa9.91□□□□□ -0.82
SPIDR-215ENST00000521798 ANKRD24Q8TF21 1146 aa9.91□□□□□ -0.82
SPIDR-215ENST00000521798 ABI2Q9NYB9 513 aaPredicted RBP9.91□□□□□ -0.82
SPIDR-215ENST00000521798 SIRPGQ9P1W8 387 aa9.91□□□□□ -0.82
SPIDR-215ENST00000521798 CNTN3Q9P232 1028 aa9.91□□□□□ -0.82
SPIDR-215ENST00000521798 EFCAB6Q5THR3 1501 aa9.91□□□□□ -0.82
SPIDR-215ENST00000521798 CEP170BQ9Y4F5 1589 aaPredicted RBP9.9□□□□□ -0.82
SPIDR-215ENST00000521798 ENPP3O14638 875 aa9.9□□□□□ -0.82
SPIDR-215ENST00000521798 EGFRP00533 1210 aa9.9□□□□□ -0.82
SPIDR-215ENST00000521798 EIF4A3P38919 411 aaKnown RBP9.9□□□□□ -0.82
SPIDR-215ENST00000521798 PHKA2P46019 1235 aa9.9□□□□□ -0.82
SPIDR-215ENST00000521798 MAP3K10Q02779 954 aa9.9□□□□□ -0.82
SPIDR-215ENST00000521798 CCDC85BQ15834 202 aaPredicted RBP9.9□□□□□ -0.82
SPIDR-215ENST00000521798 KCNB2Q92953 911 aa9.9□□□□□ -0.82
SPIDR-215ENST00000521798 TMEM74Q96NL1 305 aa9.9□□□□□ -0.82
SPIDR-215ENST00000521798 PPP4R2Q9NY27 417 aa9.9□□□□□ -0.82
SPIDR-215ENST00000521798 PPM1HQ9ULR3 514 aa9.9□□□□□ -0.82
SPIDR-215ENST00000521798 EFR3BQ9Y2G0 817 aa9.9□□□□□ -0.82
SPIDR-215ENST00000521798 A2ML1A8K2U0 1454 aa9.9□□□□□ -0.83
SPIDR-215ENST00000521798 ZNF142P52746 1687 aaPredicted RBP9.9□□□□□ -0.83
SPIDR-215ENST00000521798 GCC2Q8IWJ2 1684 aa9.9□□□□□ -0.83
SPIDR-215ENST00000521798 XYLBO75191 536 aa9.89□□□□□ -0.83
SPIDR-215ENST00000521798 GBP2P32456 591 aaPredicted RBP9.89□□□□□ -0.83
SPIDR-215ENST00000521798 SOX9P48436 509 aa9.89□□□□□ -0.83
SPIDR-215ENST00000521798 TYRO3Q06418 890 aa9.89□□□□□ -0.83
SPIDR-215ENST00000521798 LRRC69Q6ZNQ3 347 aa9.89□□□□□ -0.83
SPIDR-215ENST00000521798 SNIP1Q8TAD8 396 aaKnown RBP9.89□□□□□ -0.83
SPIDR-215ENST00000521798 EAF1Q96JC9 268 aaPredicted RBP9.89□□□□□ -0.83
SPIDR-215ENST00000521798 ZIC5Q96T25 663 aa9.89□□□□□ -0.83
SPIDR-215ENST00000521798 INSM2Q96T92 566 aaPredicted RBP9.89□□□□□ -0.83
SPIDR-215ENST00000521798 GINM1Q9NU53 330 aa9.89□□□□□ -0.83
SPIDR-215ENST00000521798 NUP155O75694 1391 aa9.88□□□□□ -0.83
SPIDR-215ENST00000521798 NLRP1Q9C000 1473 aa9.88□□□□□ -0.83
SPIDR-215ENST00000521798 RLBP1P12271 317 aa9.88□□□□□ -0.83
SPIDR-215ENST00000521798 COL9A2Q14055 689 aaPredicted RBP9.88□□□□□ -0.83
SPIDR-215ENST00000521798 PRPF40BQ6NWY9 871 aaKnown RBP9.88□□□□□ -0.83
SPIDR-215ENST00000521798 ANKS3Q6ZW76 656 aa9.88□□□□□ -0.83
SPIDR-215ENST00000521798 NLRP13Q86W25 1043 aa9.88□□□□□ -0.83
SPIDR-215ENST00000521798 TRIM56Q9BRZ2 755 aaKnown RBP9.88□□□□□ -0.83
SPIDR-215ENST00000521798 BRINP2Q9C0B6 783 aa9.88□□□□□ -0.83
SPIDR-215ENST00000521798 EHD4Q9H223 541 aa9.88□□□□□ -0.83
SPIDR-215ENST00000521798 C11orf16Q9NQ32 467 aa9.88□□□□□ -0.83
SPIDR-215ENST00000521798 KCNQ5Q9NR82 932 aa9.88□□□□□ -0.83
SPIDR-215ENST00000521798 HCSTQ9UBK5 93 aa9.88□□□□□ -0.83
SPIDR-215ENST00000521798 IQGAP3Q86VI3 1631 aa9.88□□□□□ -0.83
SPIDR-215ENST00000521798 NOS1P29475 1434 aa9.88□□□□□ -0.83
SPIDR-215ENST00000521798 TET3O43151 1660 aa9.87□□□□□ -0.83
SPIDR-215ENST00000521798 hCG_2014768A0A024R1R8 64 aa9.87□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms