RNA–Protein interactions for RNA: ENST00000521713.1

USP42-207, Transcript of ubiquitin specific peptidase 42, humanhuman

TSL 5

Gene USP42, Length 5,017 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP42-207ENST00000521713 TNNI3KQ59H18 835 aa18.5■□□□□ 0.55
USP42-207ENST00000521713 CACNA2D4Q7Z3S7 1137 aa18.5■□□□□ 0.55
USP42-207ENST00000521713 FPGT-TNNI3KV9GXZ4 949 aa18.5■□□□□ 0.55
USP42-207ENST00000521713 AATKQ6ZMQ8 1374 aa18.5■□□□□ 0.55
USP42-207ENST00000521713 ENOX2Q16206 610 aaKnown RBP18.49■□□□□ 0.55
USP42-207ENST00000521713 DPP8Q6V1X1 898 aaPredicted RBP18.49■□□□□ 0.55
USP42-207ENST00000521713 LRRC2Q9BYS8 371 aa18.49■□□□□ 0.55
USP42-207ENST00000521713 C6orf50Q9HD87 102 aa18.49■□□□□ 0.55
USP42-207ENST00000521713 MYOM2P54296 1465 aa18.49■□□□□ 0.55
USP42-207ENST00000521713 PDE6BP35913 854 aa18.49■□□□□ 0.55
USP42-207ENST00000521713 TIMM10P62072 90 aa18.49■□□□□ 0.55
USP42-207ENST00000521713 KIF4BQ2VIQ3 1234 aa18.49■□□□□ 0.55
USP42-207ENST00000521713 CTR9Q6PD62 1173 aa18.49■□□□□ 0.55
USP42-207ENST00000521713 HEATR3Q7Z4Q2 680 aa18.49■□□□□ 0.55
USP42-207ENST00000521713 SMAP1Q8IYB5 467 aaPredicted RBP18.49■□□□□ 0.55
USP42-207ENST00000521713 TEX11Q8IYF3 940 aa18.49■□□□□ 0.55
USP42-207ENST00000521713 RTL1A6NKG5 1358 aa18.49■□□□□ 0.55
USP42-207ENST00000521713 TCIRG1Q13488 830 aa18.49■□□□□ 0.55
USP42-207ENST00000521713 PLEKHM2Q8IWE5 1019 aa18.49■□□□□ 0.55
USP42-207ENST00000521713 LPIN2Q92539 896 aa18.49■□□□□ 0.55
USP42-207ENST00000521713 EZRP15311 586 aaKnown RBP18.49■□□□□ 0.55
USP42-207ENST00000521713 NAPAP54920 295 aa18.49■□□□□ 0.55
USP42-207ENST00000521713 WWC3Q9ULE0 1092 aa18.49■□□□□ 0.55
USP42-207ENST00000521713 ALDH1B1P30837 517 aa18.48■□□□□ 0.55
USP42-207ENST00000521713 ARHGEF25Q86VW2 580 aa18.48■□□□□ 0.55
USP42-207ENST00000521713 NECAB1Q8N987 351 aa18.48■□□□□ 0.55
USP42-207ENST00000521713 SMARCC2Q8TAQ2 1214 aa18.48■□□□□ 0.55
USP42-207ENST00000521713 POLR3GO15318 223 aaPredicted RBP18.48■□□□□ 0.55
USP42-207ENST00000521713 ZSCAN23Q3MJ62 389 aa18.48■□□□□ 0.55
USP42-207ENST00000521713 TCEANC2Q96MN5 208 aa18.48■□□□□ 0.55
USP42-207ENST00000521713 UBE2HP62256 183 aa18.48■□□□□ 0.55
USP42-207ENST00000521713 DHX32Q7L7V1 743 aaKnown RBP18.48■□□□□ 0.55
USP42-207ENST00000521713 GIGYF1O75420 1035 aaPredicted RBP18.47■□□□□ 0.55
USP42-207ENST00000521713 CEP135Q66GS9 1140 aa18.47■□□□□ 0.55
USP42-207ENST00000521713 KCNG4Q8TDN1 519 aa18.47■□□□□ 0.55
USP42-207ENST00000521713 RRP36Q96EU6 259 aaKnown RBP18.47■□□□□ 0.55
USP42-207ENST00000521713 GOLGA6L10A0A0M3HER8 536 aa18.47■□□□□ 0.55
USP42-207ENST00000521713 MBD4O95243 580 aa18.47■□□□□ 0.55
USP42-207ENST00000521713 SPA17Q15506 151 aa18.47■□□□□ 0.55
USP42-207ENST00000521713 MROH5Q6ZUA9 1318 aa18.47■□□□□ 0.55
USP42-207ENST00000521713 SNW1Q13573 536 aaKnown RBP18.47■□□□□ 0.55
USP42-207ENST00000521713 NOLC1Q14978 699 aaKnown RBP eCLIP18.47■□□□□ 0.55
USP42-207ENST00000521713 TBCAO75347 108 aaKnown RBP18.47■□□□□ 0.55
USP42-207ENST00000521713 ZSCAN22P10073 491 aaPredicted RBP18.47■□□□□ 0.55
USP42-207ENST00000521713 CREB3L3Q68CJ9 461 aa18.47■□□□□ 0.55
USP42-207ENST00000521713 CHMLP26374 656 aa18.46■□□□□ 0.55
USP42-207ENST00000521713 SPATA31E1Q6ZUB1 1445 aa18.46■□□□□ 0.55
USP42-207ENST00000521713 XAGE2Q96GT9 111 aa18.46■□□□□ 0.55
USP42-207ENST00000521713 PREX2Q70Z35 1606 aa18.46■□□□□ 0.55
USP42-207ENST00000521713 EIF6P56537 245 aaKnown RBP18.46■□□□□ 0.55
USP42-207ENST00000521713 STX1AQ16623 288 aa18.46■□□□□ 0.55
USP42-207ENST00000521713 LARGE2Q8N3Y3 721 aa18.46■□□□□ 0.55
USP42-207ENST00000521713 TAX1BP1Q86VP1 789 aa18.46■□□□□ 0.55
USP42-207ENST00000521713 FAM114A1Q8IWE2 563 aa18.46■□□□□ 0.55
USP42-207ENST00000521713 IL17REQ8NFR9 667 aa18.46■□□□□ 0.55
USP42-207ENST00000521713 AOX1Q06278 1338 aa18.46■□□□□ 0.55
USP42-207ENST00000521713 ATP7BP35670 1465 aa18.45■□□□□ 0.54
USP42-207ENST00000521713 RMND1Q9NWS8 449 aa18.45■□□□□ 0.54
USP42-207ENST00000521713 SPDYE3A6NKU9 549 aa18.45■□□□□ 0.54
USP42-207ENST00000521713 HOOK2Q96ED9 719 aa18.45■□□□□ 0.54
USP42-207ENST00000521713 SUCLG2Q96I99 432 aa18.45■□□□□ 0.54
USP42-207ENST00000521713 DBNDD2Q9BQY9 259 aa18.45■□□□□ 0.54
USP42-207ENST00000521713 GNA11P29992 359 aa18.45■□□□□ 0.54
USP42-207ENST00000521713 ROBO2Q9HCK4 1378 aa18.45■□□□□ 0.54
USP42-207ENST00000521713 MAPK8IP2Q13387 824 aaPredicted RBP18.45■□□□□ 0.54
USP42-207ENST00000521713 ZNF772Q68DY9 489 aaPredicted RBP18.45■□□□□ 0.54
USP42-207ENST00000521713 LUZP1Q86V48 1076 aa18.45■□□□□ 0.54
USP42-207ENST00000521713 APPBP2Q92624 585 aa18.45■□□□□ 0.54
USP42-207ENST00000521713 SNX21Q969T3 373 aa18.45■□□□□ 0.54
USP42-207ENST00000521713 SRRTQ9BXP5 876 aaKnown RBP18.45■□□□□ 0.54
USP42-207ENST00000521713 MTIF2P46199 727 aaKnown RBP18.44■□□□□ 0.54
USP42-207ENST00000521713 TBC1D22AQ8WUA7 517 aa18.44■□□□□ 0.54
USP42-207ENST00000521713 QTRT2Q9H974 415 aaKnown RBP18.44■□□□□ 0.54
USP42-207ENST00000521713 PPFIA3O75145 1194 aa18.44■□□□□ 0.54
USP42-207ENST00000521713 SYCP3Q8IZU3 236 aa18.44■□□□□ 0.54
USP42-207ENST00000521713 GJA3Q9Y6H8 435 aa18.44■□□□□ 0.54
USP42-207ENST00000521713 CCDC40Q4G0X9 1142 aa18.44■□□□□ 0.54
USP42-207ENST00000521713 CKAP2LQ8IYA6 745 aa18.44■□□□□ 0.54
USP42-207ENST00000521713 JAG2Q9Y219 1238 aa18.44■□□□□ 0.54
USP42-207ENST00000521713 TUBB4BP68371 445 aa18.44■□□□□ 0.54
USP42-207ENST00000521713 PANK2Q9BZ23 570 aa18.44■□□□□ 0.54
USP42-207ENST00000521713 TERF1P54274 439 aa18.43■□□□□ 0.54
USP42-207ENST00000521713 RPS8P62241 208 aaKnown RBP18.43■□□□□ 0.54
USP42-207ENST00000521713 GTF2A1P52655 376 aaPredicted RBP18.43■□□□□ 0.54
USP42-207ENST00000521713 RBM28Q9NW13 759 aaKnown RBP18.43■□□□□ 0.54
USP42-207ENST00000521713 KIF24Q5T7B8 1368 aa18.43■□□□□ 0.54
USP42-207ENST00000521713 TRIM75PA6NK02 468 aa18.43■□□□□ 0.54
USP42-207ENST00000521713 SPDYE4A6NLX3 237 aa18.43■□□□□ 0.54
USP42-207ENST00000521713 SYKP43405 635 aa18.43■□□□□ 0.54
USP42-207ENST00000521713 LMAN1P49257 510 aa18.43■□□□□ 0.54
USP42-207ENST00000521713 BBXQ8WY36 941 aaPredicted RBP18.43■□□□□ 0.54
USP42-207ENST00000521713 NEBLO76041 1014 aa18.42■□□□□ 0.54
USP42-207ENST00000521713 LIG1P18858 919 aa18.42■□□□□ 0.54
USP42-207ENST00000521713 PAFAH1B1P43034 410 aa18.42■□□□□ 0.54
USP42-207ENST00000521713 SSR1P43307 286 aaKnown RBP18.42■□□□□ 0.54
USP42-207ENST00000521713 MAP2K1Q02750 393 aaPredicted RBP18.42■□□□□ 0.54
USP42-207ENST00000521713 TRMT1LQ7Z2T5 733 aaKnown RBP18.42■□□□□ 0.54
USP42-207ENST00000521713 GDPD2Q9HCC8 539 aa18.42■□□□□ 0.54
USP42-207ENST00000521713 ZNF594Q96JF6 807 aaPredicted RBP18.42■□□□□ 0.54
USP42-207ENST00000521713 KDM5AP29375 1690 aaKnown RBP18.42■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms