RNA–Protein interactions for RNA: ENST00000521578.5

PTP4A3-204, Transcript of protein tyrosine phosphatase type IVA, member 3, humanhuman

APPRIS P1 TSL 5 BASIC

Gene PTP4A3, Length 1,717 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTP4A3-204ENST00000521578 SNX21Q969T3 373 aa26.76■■□□□ 1.88
PTP4A3-204ENST00000521578 COA1Q9GZY4 146 aa26.76■■□□□ 1.88
PTP4A3-204ENST00000521578 CD209Q9NNX6 404 aa26.76■■□□□ 1.88
PTP4A3-204ENST00000521578 ANTXR1Q9H6X2 564 aa26.76■■□□□ 1.87
PTP4A3-204ENST00000521578 DICER1Q9UPY3 1922 aaKnown RBP26.75■■□□□ 1.87
PTP4A3-204ENST00000521578 KCNQ5Q9NR82 932 aa26.74■■□□□ 1.87
PTP4A3-204ENST00000521578 CHD4Q14839 1912 aa26.74■■□□□ 1.87
PTP4A3-204ENST00000521578 YDJCA8MPS7 323 aa26.73■■□□□ 1.87
PTP4A3-204ENST00000521578 CCDC158Q5M9N0 1113 aa26.73■■□□□ 1.87
PTP4A3-204ENST00000521578 KIF2CQ99661 725 aa26.73■■□□□ 1.87
PTP4A3-204ENST00000521578 STAP2Q9UGK3 403 aa26.73■■□□□ 1.87
PTP4A3-204ENST00000521578 ZNRF3Q9ULT6 936 aa26.73■■□□□ 1.87
PTP4A3-204ENST00000521578 FRAT2O75474 233 aaPredicted RBP26.73■■□□□ 1.87
PTP4A3-204ENST00000521578 TTC39AQ5SRH9 613 aa26.73■■□□□ 1.87
PTP4A3-204ENST00000521578 PODNQ7Z5L7 613 aa26.73■■□□□ 1.87
PTP4A3-204ENST00000521578 IL1R1P14778 569 aa26.72■■□□□ 1.87
PTP4A3-204ENST00000521578 CASC1Q6TDU7 716 aa26.72■■□□□ 1.87
PTP4A3-204ENST00000521578 TDRD7Q8NHU6 1098 aaKnown RBP26.72■■□□□ 1.87
PTP4A3-204ENST00000521578 GNL3LQ9NVN8 582 aaKnown RBP26.72■■□□□ 1.87
PTP4A3-204ENST00000521578 SCN9AQ15858 1988 aa26.71■■□□□ 1.87
PTP4A3-204ENST00000521578 FBXW7Q969H0 707 aa26.7■■□□□ 1.87
PTP4A3-204ENST00000521578 JAG2Q9Y219 1238 aa26.7■■□□□ 1.87
PTP4A3-204ENST00000521578 AOX1Q06278 1338 aa26.7■■□□□ 1.86
PTP4A3-204ENST00000521578 RAD17O75943 681 aa26.7■■□□□ 1.86
PTP4A3-204ENST00000521578 MX1P20591 662 aa26.7■■□□□ 1.86
PTP4A3-204ENST00000521578 TSHZ3Q63HK5 1081 aa26.7■■□□□ 1.86
PTP4A3-204ENST00000521578 TIAM2Q8IVF5 1701 aa26.69■■□□□ 1.86
PTP4A3-204ENST00000521578 FZD9O00144 591 aa26.69■■□□□ 1.86
PTP4A3-204ENST00000521578 HSCBQ8IWL3 235 aa26.69■■□□□ 1.86
PTP4A3-204ENST00000521578 SCARF1Q14162 830 aa26.68■■□□□ 1.86
PTP4A3-204ENST00000521578 UQCRFS1P1P0C7P4 283 aa26.68■■□□□ 1.86
PTP4A3-204ENST00000521578 ARID4AP29374 1257 aaPredicted RBP26.68■■□□□ 1.86
PTP4A3-204ENST00000521578 EIF6P56537 245 aaKnown RBP26.68■■□□□ 1.86
PTP4A3-204ENST00000521578 GTF2IP78347 998 aa26.68■■□□□ 1.86
PTP4A3-204ENST00000521578 CHAF1AQ13111 956 aaPredicted RBP26.68■■□□□ 1.86
PTP4A3-204ENST00000521578 RASGRF1Q13972 1273 aa26.68■■□□□ 1.86
PTP4A3-204ENST00000521578 CXCL9Q07325 125 aa26.67■■□□□ 1.86
PTP4A3-204ENST00000521578 TTLL5Q6EMB2 1281 aa26.67■■□□□ 1.86
PTP4A3-204ENST00000521578 PI16Q6UXB8 463 aa26.67■■□□□ 1.86
PTP4A3-204ENST00000521578 GPATCH3Q96I76 525 aa26.67■■□□□ 1.86
PTP4A3-204ENST00000521578 USP26Q9BXU7 913 aa26.67■■□□□ 1.86
PTP4A3-204ENST00000521578 ECHDC1Q9NTX5 307 aa26.67■■□□□ 1.86
PTP4A3-204ENST00000521578 MYH13Q9UKX3 1938 aa26.67■■□□□ 1.86
PTP4A3-204ENST00000521578 ZNF541Q9H0D2 1346 aa26.66■■□□□ 1.86
PTP4A3-204ENST00000521578 MCAMP43121 646 aa26.66■■□□□ 1.86
PTP4A3-204ENST00000521578 SNRKQ9NRH2 765 aa26.66■■□□□ 1.86
PTP4A3-204ENST00000521578 COL1A1P02452 1464 aaPredicted RBP26.66■■□□□ 1.86
PTP4A3-204ENST00000521578 USP17L3A6NCW0 530 aa26.65■■□□□ 1.86
PTP4A3-204ENST00000521578 USP17L4A6NCW7 530 aa26.65■■□□□ 1.86
PTP4A3-204ENST00000521578 USP17L1Q7RTZ2 530 aa26.65■■□□□ 1.86
PTP4A3-204ENST00000521578 ZNF512BQ96KM6 892 aaPredicted RBP26.65■■□□□ 1.86
PTP4A3-204ENST00000521578 SLKQ9H2G2 1235 aaPredicted RBP26.65■■□□□ 1.86
PTP4A3-204ENST00000521578 HMG20BQ9P0W2 317 aa26.65■■□□□ 1.86
PTP4A3-204ENST00000521578 DENND2AQ9ULE3 1009 aa26.65■■□□□ 1.86
PTP4A3-204ENST00000521578 PSMD14O00487 310 aa26.65■■□□□ 1.86
PTP4A3-204ENST00000521578 CIAPIN1Q6FI81 312 aa26.65■■□□□ 1.86
PTP4A3-204ENST00000521578 SPATA5Q8NB90 893 aa26.65■■□□□ 1.86
PTP4A3-204ENST00000521578 SEMA3EO15041 775 aa26.64■■□□□ 1.85
PTP4A3-204ENST00000521578 MXD3Q9BW11 206 aa26.64■■□□□ 1.85
PTP4A3-204ENST00000521578 BOLA2Q9H3K6 86 aa26.64■■□□□ 1.85
PTP4A3-204ENST00000521578 NDUFB9Q9Y6M9 179 aa26.64■■□□□ 1.85
PTP4A3-204ENST00000521578 ATP5JP18859 108 aa26.63■■□□□ 1.85
PTP4A3-204ENST00000521578 STRIP1Q5VSL9 837 aa26.63■■□□□ 1.85
PTP4A3-204ENST00000521578 GJA3Q9Y6H8 435 aa26.63■■□□□ 1.85
PTP4A3-204ENST00000521578 AKAP11Q9UKA4 1901 aa26.62■■□□□ 1.85
PTP4A3-204ENST00000521578 TTC41PQ6P2S7 1318 aa26.62■■□□□ 1.85
PTP4A3-204ENST00000521578 FAM205AQ6ZU69 1335 aa26.62■■□□□ 1.85
PTP4A3-204ENST00000521578 REC8O95072 547 aa26.62■■□□□ 1.85
PTP4A3-204ENST00000521578 TNIP1Q15025 636 aa26.62■■□□□ 1.85
PTP4A3-204ENST00000521578 PSME4Q14997 1843 aa26.61■■□□□ 1.85
PTP4A3-204ENST00000521578 ERC2O15083 957 aa26.61■■□□□ 1.85
PTP4A3-204ENST00000521578 ZAP70P43403 619 aa26.61■■□□□ 1.85
PTP4A3-204ENST00000521578 DACT2Q5SW24 774 aa26.61■■□□□ 1.85
PTP4A3-204ENST00000521578 PI4K2BQ8TCG2 481 aa26.61■■□□□ 1.85
PTP4A3-204ENST00000521578 DNAJC2Q99543 621 aaKnown RBP26.61■■□□□ 1.85
PTP4A3-204ENST00000521578 ZC3H4Q9UPT8 1303 aaKnown RBP26.61■■□□□ 1.85
PTP4A3-204ENST00000521578 VIL1P09327 827 aaKnown RBP26.6■■□□□ 1.85
PTP4A3-204ENST00000521578 DEKP35659 375 aaKnown RBP26.6■■□□□ 1.85
PTP4A3-204ENST00000521578 ZBTB12Q9Y330 459 aaPredicted RBP26.6■■□□□ 1.85
PTP4A3-204ENST00000521578 MFSD14BQ5SR56 506 aa26.59■■□□□ 1.85
PTP4A3-204ENST00000521578 PPIL4Q8WUA2 492 aaKnown RBP eCLIP26.59■■□□□ 1.85
PTP4A3-204ENST00000521578 ZNF646O15015 1829 aaPredicted RBP26.59■■□□□ 1.85
PTP4A3-204ENST00000521578 ZBTB22O15209 634 aa26.59■■□□□ 1.85
PTP4A3-204ENST00000521578 DDNO94850 711 aaPredicted RBP26.59■■□□□ 1.85
PTP4A3-204ENST00000521578 RSBN1LQ6PCB5 846 aaPredicted RBP26.59■■□□□ 1.85
PTP4A3-204ENST00000521578 WDR66Q8TBY9 1149 aa26.59■■□□□ 1.85
PTP4A3-204ENST00000521578 GLRX3O76003 335 aaKnown RBP26.58■■□□□ 1.85
PTP4A3-204ENST00000521578 RABEP1Q15276 862 aa26.58■■□□□ 1.85
PTP4A3-204ENST00000521578 DPY19L2Q6NUT2 758 aa26.58■■□□□ 1.85
PTP4A3-204ENST00000521578 CERS5Q8N5B7 392 aa26.58■■□□□ 1.85
PTP4A3-204ENST00000521578 PDS5AQ29RF7 1337 aaKnown RBP26.57■■□□□ 1.84
PTP4A3-204ENST00000521578 CYP2E1P05181 493 aaPredicted RBP26.57■■□□□ 1.84
PTP4A3-204ENST00000521578 GPC2Q8N158 579 aa26.57■■□□□ 1.84
PTP4A3-204ENST00000521578 TBC1D22AQ8WUA7 517 aa26.57■■□□□ 1.84
PTP4A3-204ENST00000521578 EDC3Q96F86 508 aaKnown RBP26.57■■□□□ 1.84
PTP4A3-204ENST00000521578 HAUS7Q99871 368 aa26.57■■□□□ 1.84
PTP4A3-204ENST00000521578 CHMP5Q9NZZ3 219 aa26.57■■□□□ 1.84
PTP4A3-204ENST00000521578 ABCF2Q9UG63 623 aa26.57■■□□□ 1.84
PTP4A3-204ENST00000521578 MAP4K4O95819 1239 aaPredicted RBP26.56■■□□□ 1.84
PTP4A3-204ENST00000521578 GOLIM4O00461 696 aa26.56■■□□□ 1.84
Retrieved 100 of 20,778 RNA–protein pairs in 64.9 ms