RNA–Protein interactions for RNA: ENST00000521439.1

NUDCD1-204, Transcript of NudC domain containing 1, humanhuman

TSL 1 (best)

Gene NUDCD1, Length 1,172 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUDCD1-204ENST00000521439 TTC9Q92623 222 aa10.77□□□□□ -0.69
NUDCD1-204ENST00000521439 PLD4Q96BZ4 506 aa10.77□□□□□ -0.69
NUDCD1-204ENST00000521439 HHIPQ96QV1 700 aa10.77□□□□□ -0.69
NUDCD1-204ENST00000521439 METTL5Q9NRN9 209 aaKnown RBP10.77□□□□□ -0.69
NUDCD1-204ENST00000521439 USP31Q70CQ4 1352 aa10.77□□□□□ -0.69
NUDCD1-204ENST00000521439 KRBA1A5PL33 1030 aa10.76□□□□□ -0.69
NUDCD1-204ENST00000521439 SPATA31C1P0DKV0 1188 aa10.76□□□□□ -0.69
NUDCD1-204ENST00000521439 PRRT3Q5FWE3 981 aa10.76□□□□□ -0.69
NUDCD1-204ENST00000521439 C3orf58Q8NDZ4 430 aa10.76□□□□□ -0.69
NUDCD1-204ENST00000521439 IGHA1P01876 353 aa10.75□□□□□ -0.69
NUDCD1-204ENST00000521439 GRIA4P48058 902 aa10.75□□□□□ -0.69
NUDCD1-204ENST00000521439 TAF1CQ15572 869 aaPredicted RBP10.75□□□□□ -0.69
NUDCD1-204ENST00000521439 CEP135Q66GS9 1140 aa10.75□□□□□ -0.69
NUDCD1-204ENST00000521439 DTHD1Q6ZMT9 781 aa10.75□□□□□ -0.69
NUDCD1-204ENST00000521439 POP1Q99575 1024 aaKnown RBP10.75□□□□□ -0.69
NUDCD1-204ENST00000521439 SMG9Q9H0W8 520 aaKnown RBP10.75□□□□□ -0.69
NUDCD1-204ENST00000521439 ST13P50502 369 aaKnown RBP10.74□□□□□ -0.69
NUDCD1-204ENST00000521439 TRAPPC3LQ5T215 181 aa10.74□□□□□ -0.69
NUDCD1-204ENST00000521439 MEI1Q5TIA1 1274 aa10.74□□□□□ -0.69
NUDCD1-204ENST00000521439 ASAP3Q8TDY4 903 aa10.74□□□□□ -0.69
NUDCD1-204ENST00000521439 ZFYVE1Q9HBF4 777 aa10.74□□□□□ -0.69
NUDCD1-204ENST00000521439 A0A096LPE4 126 aa10.73□□□□□ -0.69
NUDCD1-204ENST00000521439 A0A1W2PPZ6 126 aa10.73□□□□□ -0.69
NUDCD1-204ENST00000521439 METTL12A8MUP2 240 aa10.73□□□□□ -0.69
NUDCD1-204ENST00000521439 ITPKAP23677 461 aa10.73□□□□□ -0.69
NUDCD1-204ENST00000521439 ZNF76P36508 570 aa10.73□□□□□ -0.69
NUDCD1-204ENST00000521439 HDLBPQ00341 1268 aaKnown RBP10.73□□□□□ -0.69
NUDCD1-204ENST00000521439 FANCCQ00597 558 aa10.73□□□□□ -0.69
NUDCD1-204ENST00000521439 PTPN12Q05209 780 aaKnown RBP10.73□□□□□ -0.69
NUDCD1-204ENST00000521439 TRIM28Q13263 835 aaKnown RBP10.73□□□□□ -0.69
NUDCD1-204ENST00000521439 GPAT2Q6NUI2 795 aa10.73□□□□□ -0.69
NUDCD1-204ENST00000521439 RNF34Q969K3 372 aa10.73□□□□□ -0.69
NUDCD1-204ENST00000521439 GRIK5Q16478 980 aa10.72□□□□□ -0.69
NUDCD1-204ENST00000521439 SPRED3Q2MJR0 410 aa10.72□□□□□ -0.69
NUDCD1-204ENST00000521439 PPM1HQ9ULR3 514 aa10.72□□□□□ -0.69
NUDCD1-204ENST00000521439 AKAP2Q9Y2D5 859 aa10.72□□□□□ -0.69
NUDCD1-204ENST00000521439 MSL1Q68DK7 614 aa10.71□□□□□ -0.69
NUDCD1-204ENST00000521439 ANKRD24Q8TF21 1146 aa10.71□□□□□ -0.69
NUDCD1-204ENST00000521439 TTF2Q9UNY4 1162 aaKnown RBP10.71□□□□□ -0.69
NUDCD1-204ENST00000521439 ITGB2P05107 769 aa10.7□□□□□ -0.7
NUDCD1-204ENST00000521439 PTPRAP18433 802 aa10.7□□□□□ -0.7
NUDCD1-204ENST00000521439 RAC1P63000 192 aa10.7□□□□□ -0.7
NUDCD1-204ENST00000521439 METTL16Q86W50 562 aaKnown RBP10.7□□□□□ -0.7
NUDCD1-204ENST00000521439 BSNDQ8WZ55 320 aa10.7□□□□□ -0.7
NUDCD1-204ENST00000521439 TRIM33Q9UPN9 1127 aa10.7□□□□□ -0.7
NUDCD1-204ENST00000521439 A0A0A0MRY4 1105 aa10.69□□□□□ -0.7
NUDCD1-204ENST00000521439 C9orf131Q5VYM1 1079 aa10.69□□□□□ -0.7
NUDCD1-204ENST00000521439 WFDC8Q8IUA0 241 aa10.69□□□□□ -0.7
NUDCD1-204ENST00000521439 ADAM19Q9H013 955 aa10.69□□□□□ -0.7
NUDCD1-204ENST00000521439 MUC3BQ9H195 1237 aa10.69□□□□□ -0.7
NUDCD1-204ENST00000521439 FAM229AH3BQW9 127 aa10.68□□□□□ -0.7
NUDCD1-204ENST00000521439 MSTNO14793 375 aa10.68□□□□□ -0.7
NUDCD1-204ENST00000521439 RPS26P11Q5JNZ5 115 aaPredicted RBP10.68□□□□□ -0.7
NUDCD1-204ENST00000521439 ADAMTSL4Q6UY14 1074 aa10.68□□□□□ -0.7
NUDCD1-204ENST00000521439 ILDR2Q71H61 639 aa10.68□□□□□ -0.7
NUDCD1-204ENST00000521439 DMRTC2Q8IXT2 367 aaPredicted RBP10.68□□□□□ -0.7
NUDCD1-204ENST00000521439 CACTIN-AS1Q8N1I8 211 aa10.68□□□□□ -0.7
NUDCD1-204ENST00000521439 DTWD1Q8N5C7 304 aa10.68□□□□□ -0.7
NUDCD1-204ENST00000521439 LACRTQ9GZZ8 138 aa10.68□□□□□ -0.7
NUDCD1-204ENST00000521439 ZNF576Q9H609 170 aa10.68□□□□□ -0.7
NUDCD1-204ENST00000521439 C1QTNF9BB2RNN3 333 aa10.67□□□□□ -0.7
NUDCD1-204ENST00000521439 APBA3O96018 575 aa10.67□□□□□ -0.7
NUDCD1-204ENST00000521439 GDF6Q6KF10 455 aaPredicted RBP10.67□□□□□ -0.7
NUDCD1-204ENST00000521439 HS2ST1Q7LGA3 356 aa10.67□□□□□ -0.7
NUDCD1-204ENST00000521439 NT5DC4Q86YG4 428 aa10.67□□□□□ -0.7
NUDCD1-204ENST00000521439 NACC1Q96RE7 527 aa10.67□□□□□ -0.7
NUDCD1-204ENST00000521439 NOC4LQ9BVI4 516 aaKnown RBP10.67□□□□□ -0.7
NUDCD1-204ENST00000521439 SOX13Q9UN79 622 aa10.67□□□□□ -0.7
NUDCD1-204ENST00000521439 FAM177BA6PVY3 158 aa10.66□□□□□ -0.7
NUDCD1-204ENST00000521439 ELNP15502 786 aa10.66□□□□□ -0.7
NUDCD1-204ENST00000521439 ERCC5P28715 1186 aaPredicted RBP10.66□□□□□ -0.7
NUDCD1-204ENST00000521439 CHRNA4P43681 627 aa10.66□□□□□ -0.7
NUDCD1-204ENST00000521439 CD163Q86VB7 1156 aa10.66□□□□□ -0.7
NUDCD1-204ENST00000521439 SPOCK3Q9BQ16 436 aa10.66□□□□□ -0.7
NUDCD1-204ENST00000521439 CLEC4MQ9H2X3 399 aaPredicted RBP10.66□□□□□ -0.7
NUDCD1-204ENST00000521439 CDC27P30260 824 aa10.65□□□□□ -0.7
NUDCD1-204ENST00000521439 CCDC85BQ15834 202 aaPredicted RBP10.65□□□□□ -0.7
NUDCD1-204ENST00000521439 SV2BQ7L1I2 683 aa10.65□□□□□ -0.7
NUDCD1-204ENST00000521439 FMR1NBQ8N0W7 255 aaPredicted RBP10.65□□□□□ -0.7
NUDCD1-204ENST00000521439 CEP44Q9C0F1 390 aa10.65□□□□□ -0.7
NUDCD1-204ENST00000521439 GGT7Q9UJ14 662 aa10.65□□□□□ -0.7
NUDCD1-204ENST00000521439 FBXO24O75426 580 aa10.64□□□□□ -0.71
NUDCD1-204ENST00000521439 PROCP04070 461 aa10.64□□□□□ -0.71
NUDCD1-204ENST00000521439 TPTE2Q6XPS3 522 aa10.64□□□□□ -0.71
NUDCD1-204ENST00000521439 VN1R5Q7Z5H4 357 aa10.64□□□□□ -0.71
NUDCD1-204ENST00000521439 SEC31BQ9NQW1 1179 aa10.64□□□□□ -0.71
NUDCD1-204ENST00000521439 SH2B1Q9NRF2 756 aaPredicted RBP10.64□□□□□ -0.71
NUDCD1-204ENST00000521439 RAD51AP2Q09MP3 1159 aa10.63□□□□□ -0.71
NUDCD1-204ENST00000521439 FAAP100Q0VG06 881 aa10.63□□□□□ -0.71
NUDCD1-204ENST00000521439 GRIK4Q16099 956 aa10.63□□□□□ -0.71
NUDCD1-204ENST00000521439 BAG6P46379 1132 aa10.62□□□□□ -0.71
NUDCD1-204ENST00000521439 CABP4P57796 275 aa10.62□□□□□ -0.71
NUDCD1-204ENST00000521439 PCDH1Q08174 1060 aa10.62□□□□□ -0.71
NUDCD1-204ENST00000521439 ERMP1Q7Z2K6 904 aa10.62□□□□□ -0.71
NUDCD1-204ENST00000521439 IL22RA1Q8N6P7 574 aa10.62□□□□□ -0.71
NUDCD1-204ENST00000521439 NECAB3Q96P71 396 aaPredicted RBP10.62□□□□□ -0.71
NUDCD1-204ENST00000521439 C9orf172C9J069 976 aa10.61□□□□□ -0.71
NUDCD1-204ENST00000521439 EPHA1P21709 976 aa10.61□□□□□ -0.71
NUDCD1-204ENST00000521439 ZNF423Q2M1K9 1284 aa10.61□□□□□ -0.71
NUDCD1-204ENST00000521439 FBXO11Q86XK2 927 aa10.61□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms