RNA–Protein interactions for RNA: ENST00000521127.1

SNHG6-204, Transcript of small nucleolar RNA host gene 6, humanhuman

TSL 2

Gene SNHG6, Length 560 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG6-204ENST00000521127 ZBTB4Q9P1Z0 1013 aaPredicted RBP23.78■■□□□ 1.4
SNHG6-204ENST00000521127 COL1A1P02452 1464 aaPredicted RBP23.78■■□□□ 1.4
SNHG6-204ENST00000521127 AOX1Q06278 1338 aa23.78■■□□□ 1.4
SNHG6-204ENST00000521127 ANKRD18BA2A2Z9 1011 aa23.77■■□□□ 1.4
SNHG6-204ENST00000521127 FKBP5Q13451 457 aaPredicted RBP23.77■■□□□ 1.4
SNHG6-204ENST00000521127 IFNL1Q8IU54 200 aa23.77■■□□□ 1.4
SNHG6-204ENST00000521127 MANSC4A6NHS7 340 aaPredicted RBP23.76■■□□□ 1.39
SNHG6-204ENST00000521127 ALDH1A1P00352 501 aa23.76■■□□□ 1.39
SNHG6-204ENST00000521127 FOXO4P98177 505 aa23.76■■□□□ 1.39
SNHG6-204ENST00000521127 WNK4Q96J92 1243 aa23.76■■□□□ 1.39
SNHG6-204ENST00000521127 CLRN2A0PK11 232 aa23.75■■□□□ 1.39
SNHG6-204ENST00000521127 F8W031 263 aaPredicted RBP23.75■■□□□ 1.39
SNHG6-204ENST00000521127 IGF2BP3O00425 579 aaKnown RBP eCLIP23.75■■□□□ 1.39
SNHG6-204ENST00000521127 IL1R1P14778 569 aa23.75■■□□□ 1.39
SNHG6-204ENST00000521127 INHBEP58166 350 aa23.75■■□□□ 1.39
SNHG6-204ENST00000521127 CFAP100Q494V2 611 aa23.75■■□□□ 1.39
SNHG6-204ENST00000521127 PRMT6Q96LA8 375 aaPredicted RBP23.75■■□□□ 1.39
SNHG6-204ENST00000521127 A0A1B0GUL6 1792 aa23.75■■□□□ 1.39
SNHG6-204ENST00000521127 ECM29Q5VYK3 1845 aa23.75■■□□□ 1.39
SNHG6-204ENST00000521127 SPDYE2BA6NHP3 402 aa23.74■■□□□ 1.39
SNHG6-204ENST00000521127 SPDYE6P0CI01 402 aa23.74■■□□□ 1.39
SNHG6-204ENST00000521127 PPP2R3BQ9Y5P8 575 aa23.74■■□□□ 1.39
SNHG6-204ENST00000521127 IL16Q14005 1332 aa23.74■■□□□ 1.39
SNHG6-204ENST00000521127 CACNA1FO60840 1977 aa23.73■■□□□ 1.39
SNHG6-204ENST00000521127 PPP1R12BO60237 982 aaPredicted RBP23.73■■□□□ 1.39
SNHG6-204ENST00000521127 ZBTB48P10074 688 aaPredicted RBP23.73■■□□□ 1.39
SNHG6-204ENST00000521127 NBPF12Q5TAG4 269 aaPredicted RBP23.73■■□□□ 1.39
SNHG6-204ENST00000521127 JAG2Q9Y219 1238 aa23.73■■□□□ 1.39
SNHG6-204ENST00000521127 KIAA0100Q14667 2235 aaKnown RBP23.73■■□□□ 1.39
SNHG6-204ENST00000521127 HTTP42858 3142 aa23.72■■□□□ 1.39
SNHG6-204ENST00000521127 VAMP4O75379 141 aa23.72■■□□□ 1.39
SNHG6-204ENST00000521127 GJA5P36382 358 aa23.72■■□□□ 1.39
SNHG6-204ENST00000521127 IFIT5Q13325 482 aaKnown RBP23.72■■□□□ 1.39
SNHG6-204ENST00000521127 OTOP1Q7RTM1 612 aa23.72■■□□□ 1.39
SNHG6-204ENST00000521127 ZNF804AQ7Z570 1209 aa23.72■■□□□ 1.39
SNHG6-204ENST00000521127 TRIM17Q9Y577 477 aa23.72■■□□□ 1.39
SNHG6-204ENST00000521127 LAMB1P07942 1786 aa23.71■■□□□ 1.39
SNHG6-204ENST00000521127 FANCIQ9NVI1 1328 aa23.71■■□□□ 1.39
SNHG6-204ENST00000521127 F6X3S4 739 aa23.71■■□□□ 1.39
SNHG6-204ENST00000521127 USP2O75604 605 aaPredicted RBP23.71■■□□□ 1.39
SNHG6-204ENST00000521127 FKBP1AP62942 108 aaKnown RBP23.71■■□□□ 1.39
SNHG6-204ENST00000521127 SUPT20HL1Q3ZLR7 823 aa23.71■■□□□ 1.39
SNHG6-204ENST00000521127 EPHA10Q5JZY3 1008 aa23.71■■□□□ 1.39
SNHG6-204ENST00000521127 VEZTQ9HBM0 779 aa23.71■■□□□ 1.39
SNHG6-204ENST00000521127 CHMP3Q9Y3E7 222 aa23.71■■□□□ 1.39
SNHG6-204ENST00000521127 BEND3Q5T5X7 828 aa23.7■■□□□ 1.38
SNHG6-204ENST00000521127 ZNF594Q96JF6 807 aaPredicted RBP23.7■■□□□ 1.38
SNHG6-204ENST00000521127 UNCXA6NJT0 531 aa23.69■■□□□ 1.38
SNHG6-204ENST00000521127 MYO1BO43795 1136 aa23.69■■□□□ 1.38
SNHG6-204ENST00000521127 LMBR1LQ6UX01 489 aa23.69■■□□□ 1.38
SNHG6-204ENST00000521127 POTEFA5A3E0 1075 aa23.68■■□□□ 1.38
SNHG6-204ENST00000521127 PLIN1O60240 522 aa23.68■■□□□ 1.38
SNHG6-204ENST00000521127 RASA3Q14644 834 aa23.68■■□□□ 1.38
SNHG6-204ENST00000521127 PTPN18Q99952 460 aa23.68■■□□□ 1.38
SNHG6-204ENST00000521127 IREB2P48200 963 aaKnown RBP23.67■■□□□ 1.38
SNHG6-204ENST00000521127 CRHR2Q13324 411 aa23.67■■□□□ 1.38
SNHG6-204ENST00000521127 CD99L2Q8TCZ2 262 aa23.67■■□□□ 1.38
SNHG6-204ENST00000521127 FAM205AQ6ZU69 1335 aa23.66■■□□□ 1.38
SNHG6-204ENST00000521127 RBM5P52756 815 aaKnown RBP eCLIP23.66■■□□□ 1.38
SNHG6-204ENST00000521127 CAP1Q01518 475 aa23.66■■□□□ 1.38
SNHG6-204ENST00000521127 EXOSC9Q06265 439 aaKnown RBP23.66■■□□□ 1.38
SNHG6-204ENST00000521127 NCBP3Q53F19 620 aaKnown RBP23.66■■□□□ 1.38
SNHG6-204ENST00000521127 LDHAL6AQ6ZMR3 332 aa23.66■■□□□ 1.38
SNHG6-204ENST00000521127 TESPA1A2RU30 521 aaPredicted RBP23.65■■□□□ 1.38
SNHG6-204ENST00000521127 ANKRD13AQ8IZ07 590 aa23.65■■□□□ 1.38
SNHG6-204ENST00000521127 ERO1AQ96HE7 468 aa23.65■■□□□ 1.38
SNHG6-204ENST00000521127 ZNF70Q9UC06 446 aaPredicted RBP23.65■■□□□ 1.38
SNHG6-204ENST00000521127 PTPN22Q9Y2R2 807 aa23.65■■□□□ 1.38
SNHG6-204ENST00000521127 CCDC57Q2TAC2 916 aa23.64■■□□□ 1.37
SNHG6-204ENST00000521127 SPDYE2Q495Y8 402 aa23.64■■□□□ 1.37
SNHG6-204ENST00000521127 INTS3Q68E01 1043 aaKnown RBP23.64■■□□□ 1.37
SNHG6-204ENST00000521127 CDAN1Q8IWY9 1227 aa23.64■■□□□ 1.37
SNHG6-204ENST00000521127 TDRD7Q8NHU6 1098 aaKnown RBP23.64■■□□□ 1.37
SNHG6-204ENST00000521127 OTOFQ9HC10 1997 aa23.63■■□□□ 1.37
SNHG6-204ENST00000521127 GRM8O00222 908 aa23.63■■□□□ 1.37
SNHG6-204ENST00000521127 TDRD3Q9H7E2 651 aaKnown RBP23.63■■□□□ 1.37
SNHG6-204ENST00000521127 ELP3Q9H9T3 547 aa23.63■■□□□ 1.37
SNHG6-204ENST00000521127 CNNM1Q9NRU3 951 aa23.63■■□□□ 1.37
SNHG6-204ENST00000521127 SALL2Q9Y467 1007 aaPredicted RBP23.63■■□□□ 1.37
SNHG6-204ENST00000521127 GYG1P46976 350 aa23.62■■□□□ 1.37
SNHG6-204ENST00000521127 TAF7LQ5H9L4 462 aa23.62■■□□□ 1.37
SNHG6-204ENST00000521127 MFSD14BQ5SR56 506 aa23.62■■□□□ 1.37
SNHG6-204ENST00000521127 OTUD7BQ6GQQ9 843 aa23.62■■□□□ 1.37
SNHG6-204ENST00000521127 MS4A4AQ96JQ5 239 aa23.62■■□□□ 1.37
SNHG6-204ENST00000521127 TEPSINQ96N21 525 aa23.62■■□□□ 1.37
SNHG6-204ENST00000521127 EFCC1Q9HA90 598 aa23.62■■□□□ 1.37
SNHG6-204ENST00000521127 TTF2Q9UNY4 1162 aaKnown RBP23.62■■□□□ 1.37
SNHG6-204ENST00000521127 MKI67P46013 3256 aaKnown RBP23.62■■□□□ 1.37
SNHG6-204ENST00000521127 PPP1R3FQ6ZSY5 799 aaPredicted RBP23.61■■□□□ 1.37
SNHG6-204ENST00000521127 WDR63Q8IWG1 891 aa23.61■■□□□ 1.37
SNHG6-204ENST00000521127 CNKSR2Q8WXI2 1034 aa23.61■■□□□ 1.37
SNHG6-204ENST00000521127 OPTNQ96CV9 577 aa23.61■■□□□ 1.37
SNHG6-204ENST00000521127 FAM84BQ96KN1 310 aaPredicted RBP23.61■■□□□ 1.37
SNHG6-204ENST00000521127 PUS3Q9BZE2 481 aaKnown RBP23.61■■□□□ 1.37
SNHG6-204ENST00000521127 SERPINA10Q9UK55 444 aa23.61■■□□□ 1.37
SNHG6-204ENST00000521127 SP3Q02447 781 aa23.6■■□□□ 1.37
SNHG6-204ENST00000521127 UBE4AQ14139 1066 aa23.6■■□□□ 1.37
SNHG6-204ENST00000521127 ARMC5Q96C12 935 aa23.6■■□□□ 1.37
SNHG6-204ENST00000521127 SPINK5Q9NQ38 1064 aaPredicted RBP23.6■■□□□ 1.37
SNHG6-204ENST00000521127 CENPFP49454 3210 aa23.59■■□□□ 1.37
Retrieved 100 of 20,778 RNA–protein pairs in 215.4 ms