RNA–Protein interactions for RNA: ENST00000520946.1

MRPS28-206, Transcript of mitochondrial ribosomal protein S28, humanhuman

TSL 5

Gene MRPS28, Length 411 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPS28-206ENST00000520946 TAF5LO75529 589 aa14.65□□□□□ -0.06
MRPS28-206ENST00000520946 ARHGEF6Q15052 776 aa14.65□□□□□ -0.06
MRPS28-206ENST00000520946 CFAP100Q494V2 611 aa14.65□□□□□ -0.06
MRPS28-206ENST00000520946 SPEF2Q9C093 1822 aa14.64□□□□□ -0.07
MRPS28-206ENST00000520946 COL1A1P02452 1464 aaPredicted RBP14.64□□□□□ -0.07
MRPS28-206ENST00000520946 UNCXA6NJT0 531 aa14.64□□□□□ -0.07
MRPS28-206ENST00000520946 WDHD1O75717 1129 aaPredicted RBP14.64□□□□□ -0.07
MRPS28-206ENST00000520946 OTOP1Q7RTM1 612 aa14.64□□□□□ -0.07
MRPS28-206ENST00000520946 HELBQ8NG08 1087 aaPredicted RBP14.64□□□□□ -0.07
MRPS28-206ENST00000520946 DNAAF4Q8WXU2 420 aa14.64□□□□□ -0.07
MRPS28-206ENST00000520946 CLMNQ96JQ2 1002 aa14.64□□□□□ -0.07
MRPS28-206ENST00000520946 TMEM106CQ9BVX2 250 aa14.64□□□□□ -0.07
MRPS28-206ENST00000520946 PLA2G12BQ9BX93 195 aa14.64□□□□□ -0.07
MRPS28-206ENST00000520946 PRKRIP1Q9H875 184 aaPredicted RBP14.64□□□□□ -0.07
MRPS28-206ENST00000520946 EFCC1Q9HA90 598 aa14.64□□□□□ -0.07
MRPS28-206ENST00000520946 MYH3P11055 1940 aa14.63□□□□□ -0.07
MRPS28-206ENST00000520946 FLIIQ13045 1269 aa14.63□□□□□ -0.07
MRPS28-206ENST00000520946 TNFAIP1Q13829 316 aa14.63□□□□□ -0.07
MRPS28-206ENST00000520946 G2E3Q7L622 706 aa14.63□□□□□ -0.07
MRPS28-206ENST00000520946 ANKRD13AQ8IZ07 590 aa14.63□□□□□ -0.07
MRPS28-206ENST00000520946 LINS1Q8NG48 757 aa14.63□□□□□ -0.07
MRPS28-206ENST00000520946 SP3Q02447 781 aa14.62□□□□□ -0.07
MRPS28-206ENST00000520946 MAP3K11Q16584 847 aa14.62□□□□□ -0.07
MRPS28-206ENST00000520946 CCDC57Q2TAC2 916 aa14.62□□□□□ -0.07
MRPS28-206ENST00000520946 MTMR14Q8NCE2 650 aa14.62□□□□□ -0.07
MRPS28-206ENST00000520946 CD99L2Q8TCZ2 262 aa14.62□□□□□ -0.07
MRPS28-206ENST00000520946 ZBED3Q96IU2 234 aaPredicted RBP14.62□□□□□ -0.07
MRPS28-206ENST00000520946 CNNM1Q9NRU3 951 aa14.62□□□□□ -0.07
MRPS28-206ENST00000520946 JAG2Q9Y219 1238 aa14.62□□□□□ -0.07
MRPS28-206ENST00000520946 SPDYE2BA6NHP3 402 aa14.61□□□□□ -0.07
MRPS28-206ENST00000520946 IGF2BP3O00425 579 aaKnown RBP eCLIP14.61□□□□□ -0.07
MRPS28-206ENST00000520946 CSF1RP07333 972 aa14.61□□□□□ -0.07
MRPS28-206ENST00000520946 SPDYE6P0CI01 402 aa14.61□□□□□ -0.07
MRPS28-206ENST00000520946 CRHR2Q13324 411 aa14.61□□□□□ -0.07
MRPS28-206ENST00000520946 RASA3Q14644 834 aa14.61□□□□□ -0.07
MRPS28-206ENST00000520946 NBPF12Q5TAG4 269 aaPredicted RBP14.61□□□□□ -0.07
MRPS28-206ENST00000520946 NBPF11Q86T75 865 aa14.61□□□□□ -0.07
MRPS28-206ENST00000520946 PRMT6Q96LA8 375 aaPredicted RBP14.61□□□□□ -0.07
MRPS28-206ENST00000520946 PTPN22Q9Y2R2 807 aa14.61□□□□□ -0.07
MRPS28-206ENST00000520946 POTEFA5A3E0 1075 aa14.6□□□□□ -0.07
MRPS28-206ENST00000520946 SNAP23O00161 211 aa14.6□□□□□ -0.07
MRPS28-206ENST00000520946 TNNI2P48788 182 aa14.6□□□□□ -0.07
MRPS28-206ENST00000520946 FKBP1AP62942 108 aaKnown RBP14.6□□□□□ -0.07
MRPS28-206ENST00000520946 SLC4A8Q2Y0W8 1093 aa14.6□□□□□ -0.07
MRPS28-206ENST00000520946 LDHAL6AQ6ZMR3 332 aa14.6□□□□□ -0.07
MRPS28-206ENST00000520946 CERS5Q8N5B7 392 aa14.6□□□□□ -0.07
MRPS28-206ENST00000520946 ELP3Q9H9T3 547 aa14.6□□□□□ -0.07
MRPS28-206ENST00000520946 USP2O75604 605 aaPredicted RBP14.59□□□□□ -0.07
MRPS28-206ENST00000520946 IL1R1P14778 569 aa14.59□□□□□ -0.07
MRPS28-206ENST00000520946 HABP4Q5JVS0 413 aaKnown RBP14.59□□□□□ -0.07
MRPS28-206ENST00000520946 C15orf52Q6ZUT6 534 aaKnown RBP14.59□□□□□ -0.07
MRPS28-206ENST00000520946 VPS37DQ86XT2 251 aa14.59□□□□□ -0.07
MRPS28-206ENST00000520946 OPTNQ96CV9 577 aa14.59□□□□□ -0.07
MRPS28-206ENST00000520946 ZFYVE28Q9HCC9 887 aa14.59□□□□□ -0.07
MRPS28-206ENST00000520946 PCDHAC2Q9Y5I4 1007 aa14.59□□□□□ -0.07
MRPS28-206ENST00000520946 CSADQ9Y600 493 aa14.59□□□□□ -0.07
MRPS28-206ENST00000520946 FRAT2O75474 233 aaPredicted RBP14.58□□□□□ -0.08
MRPS28-206ENST00000520946 KIF22Q14807 665 aa14.58□□□□□ -0.08
MRPS28-206ENST00000520946 TAF1CQ15572 869 aaPredicted RBP14.58□□□□□ -0.08
MRPS28-206ENST00000520946 SLC9C1Q4G0N8 1177 aa14.58□□□□□ -0.08
MRPS28-206ENST00000520946 MFSD14BQ5SR56 506 aa14.58□□□□□ -0.08
MRPS28-206ENST00000520946 LMBR1LQ6UX01 489 aa14.58□□□□□ -0.08
MRPS28-206ENST00000520946 WWC1Q8IX03 1113 aa14.58□□□□□ -0.08
MRPS28-206ENST00000520946 C9orf78Q9NZ63 289 aaPredicted RBP14.58□□□□□ -0.08
MRPS28-206ENST00000520946 TTF2Q9UNY4 1162 aaKnown RBP14.58□□□□□ -0.08
MRPS28-206ENST00000520946 TNRC18O15417 2968 aaPredicted RBP14.58□□□□□ -0.08
MRPS28-206ENST00000520946 EN2P19622 333 aaPredicted RBP14.57□□□□□ -0.08
MRPS28-206ENST00000520946 GTF2A2P52657 109 aa14.57□□□□□ -0.08
MRPS28-206ENST00000520946 ZNF70Q9UC06 446 aaPredicted RBP14.57□□□□□ -0.08
MRPS28-206ENST00000520946 CCL15-CCL14A0A0B4J2E2 113 aa14.56□□□□□ -0.08
MRPS28-206ENST00000520946 TCP10L2B9ZVM9 353 aa14.56□□□□□ -0.08
MRPS28-206ENST00000520946 HIBADHP31937 336 aaKnown RBP14.56□□□□□ -0.08
MRPS28-206ENST00000520946 CASP7P55210 303 aa14.56□□□□□ -0.08
MRPS28-206ENST00000520946 CCL15Q16663 113 aa14.56□□□□□ -0.08
MRPS28-206ENST00000520946 CCDC27Q2M243 656 aa14.56□□□□□ -0.08
MRPS28-206ENST00000520946 TDRD3Q9H7E2 651 aaKnown RBP14.56□□□□□ -0.08
MRPS28-206ENST00000520946 TMOD2Q9NZR1 351 aa14.56□□□□□ -0.08
MRPS28-206ENST00000520946 SERPINA10Q9UK55 444 aa14.56□□□□□ -0.08
MRPS28-206ENST00000520946 SALL2Q9Y467 1007 aaPredicted RBP14.56□□□□□ -0.08
MRPS28-206ENST00000520946 MYCP01106 439 aaPredicted RBP14.55□□□□□ -0.08
MRPS28-206ENST00000520946 MAP3K9P80192 1104 aa14.55□□□□□ -0.08
MRPS28-206ENST00000520946 FOXO4P98177 505 aa14.55□□□□□ -0.08
MRPS28-206ENST00000520946 ARMC5Q96C12 935 aa14.55□□□□□ -0.08
MRPS28-206ENST00000520946 ZNF594Q96JF6 807 aaPredicted RBP14.55□□□□□ -0.08
MRPS28-206ENST00000520946 IL16Q14005 1332 aa14.55□□□□□ -0.08
MRPS28-206ENST00000520946 TESPA1A2RU30 521 aaPredicted RBP14.54□□□□□ -0.08
MRPS28-206ENST00000520946 F6X3S4 739 aa14.54□□□□□ -0.08
MRPS28-206ENST00000520946 GJA5P36382 358 aa14.54□□□□□ -0.08
MRPS28-206ENST00000520946 GYG1P46976 350 aa14.54□□□□□ -0.08
MRPS28-206ENST00000520946 SPDYE2Q495Y8 402 aa14.54□□□□□ -0.08
MRPS28-206ENST00000520946 SLC4A10Q6U841 1118 aa14.54□□□□□ -0.08
MRPS28-206ENST00000520946 DZIP1LQ8IYY4 767 aaKnown RBP14.54□□□□□ -0.08
MRPS28-206ENST00000520946 HOOK2Q96ED9 719 aa14.54□□□□□ -0.08
MRPS28-206ENST00000520946 OTUD5Q96G74 571 aa14.54□□□□□ -0.08
MRPS28-206ENST00000520946 PTPN18Q99952 460 aa14.54□□□□□ -0.08
MRPS28-206ENST00000520946 GRM8O00222 908 aa14.53□□□□□ -0.08
MRPS28-206ENST00000520946 CRKP46108 304 aa14.53□□□□□ -0.08
MRPS28-206ENST00000520946 CHAF1AQ13111 956 aaPredicted RBP14.53□□□□□ -0.08
MRPS28-206ENST00000520946 UBE4AQ14139 1066 aa14.53□□□□□ -0.08
MRPS28-206ENST00000520946 CAVIN4Q5BKX8 364 aa14.53□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms