RNA–Protein interactions for RNA: ENST00000520887.1

FAM49B-218, Transcript of family with sequence similarity 49 member B, humanhuman

TSL 2

Gene FAM49B, Length 640 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAM49B-218ENST00000520887 U2AF1Q01081 240 aaKnown RBP eCLIP7.83□□□□□ -1.16
FAM49B-218ENST00000520887 OXLD1Q5BKU9 147 aa7.83□□□□□ -1.16
FAM49B-218ENST00000520887 FAM196AQ6ZSG2 479 aa7.83□□□□□ -1.16
FAM49B-218ENST00000520887 ZCRB1Q8TBF4 217 aaKnown RBP7.83□□□□□ -1.16
FAM49B-218ENST00000520887 GTPBP3Q969Y2 492 aaKnown RBP7.83□□□□□ -1.16
FAM49B-218ENST00000520887 PRKRIP1Q9H875 184 aaPredicted RBP7.83□□□□□ -1.16
FAM49B-218ENST00000520887 RGS17Q9UGC6 210 aaPredicted RBP7.83□□□□□ -1.16
FAM49B-218ENST00000520887 IGSF1Q8N6C5 1336 aa7.82□□□□□ -1.16
FAM49B-218ENST00000520887 ARHGEF15O94989 841 aa7.82□□□□□ -1.16
FAM49B-218ENST00000520887 PHKA2P46019 1235 aa7.82□□□□□ -1.16
FAM49B-218ENST00000520887 SEMA3FQ13275 785 aa7.82□□□□□ -1.16
FAM49B-218ENST00000520887 SULT6B1Q6IMI4 303 aa7.82□□□□□ -1.16
FAM49B-218ENST00000520887 USHBP1Q8N6Y0 703 aa7.82□□□□□ -1.16
FAM49B-218ENST00000520887 GAS2L2Q8NHY3 880 aa7.82□□□□□ -1.16
FAM49B-218ENST00000520887 MBIPQ9NS73 344 aa7.82□□□□□ -1.16
FAM49B-218ENST00000520887 BAG6P46379 1132 aa7.81□□□□□ -1.16
FAM49B-218ENST00000520887 GNASQ5JWF2 1037 aa7.81□□□□□ -1.16
FAM49B-218ENST00000520887 NBPF6Q5VWK0 638 aa7.81□□□□□ -1.16
FAM49B-218ENST00000520887 TMEM214Q6NUQ4 689 aaKnown RBP7.81□□□□□ -1.16
FAM49B-218ENST00000520887 LYPD4Q6UWN0 246 aa7.81□□□□□ -1.16
FAM49B-218ENST00000520887 DDX54Q8TDD1 881 aaKnown RBP7.81□□□□□ -1.16
FAM49B-218ENST00000520887 RTF1Q92541 710 aaKnown RBP7.81□□□□□ -1.16
FAM49B-218ENST00000520887 NBPF4Q96M43 638 aa7.81□□□□□ -1.16
FAM49B-218ENST00000520887 TRERF1Q96PN7 1200 aa7.81□□□□□ -1.16
FAM49B-218ENST00000520887 FHDC1Q9C0D6 1143 aaPredicted RBP7.81□□□□□ -1.16
FAM49B-218ENST00000520887 NUCKS1Q9H1E3 243 aaKnown RBP7.81□□□□□ -1.16
FAM49B-218ENST00000520887 RGPD2P0DJD1 1756 aa7.81□□□□□ -1.16
FAM49B-218ENST00000520887 RGPD1P0DJD0 1748 aa7.81□□□□□ -1.16
FAM49B-218ENST00000520887 DISP2A7MBM2 1401 aa7.8□□□□□ -1.16
FAM49B-218ENST00000520887 RNF225M0QZC1 329 aaPredicted RBP7.8□□□□□ -1.16
FAM49B-218ENST00000520887 CELA2BP08218 269 aaPredicted RBP7.8□□□□□ -1.16
FAM49B-218ENST00000520887 IL13P35225 146 aa7.8□□□□□ -1.16
FAM49B-218ENST00000520887 SOX11P35716 441 aa7.8□□□□□ -1.16
FAM49B-218ENST00000520887 GSK3AP49840 483 aa7.8□□□□□ -1.16
FAM49B-218ENST00000520887 MAP3K10Q02779 954 aa7.8□□□□□ -1.16
FAM49B-218ENST00000520887 LMOD3Q0VAK6 560 aa7.8□□□□□ -1.16
FAM49B-218ENST00000520887 MAP7D1Q3KQU3 841 aa7.8□□□□□ -1.16
FAM49B-218ENST00000520887 DIEXFQ68CQ4 756 aaKnown RBP7.8□□□□□ -1.16
FAM49B-218ENST00000520887 ZNF530Q6P9A1 599 aaPredicted RBP7.8□□□□□ -1.16
FAM49B-218ENST00000520887 IFNL2Q8IZJ0 200 aa7.8□□□□□ -1.16
FAM49B-218ENST00000520887 ETNK1Q9HBU6 452 aa7.8□□□□□ -1.16
FAM49B-218ENST00000520887 MRS2Q9HD23 443 aa7.8□□□□□ -1.16
FAM49B-218ENST00000520887 A0A1B0GTH6 734 aa7.79□□□□□ -1.16
FAM49B-218ENST00000520887 STAU1O95793 577 aaKnown RBP7.79□□□□□ -1.16
FAM49B-218ENST00000520887 HMOX1P09601 288 aa7.79□□□□□ -1.16
FAM49B-218ENST00000520887 MARSP56192 900 aaKnown RBP7.79□□□□□ -1.16
FAM49B-218ENST00000520887 PLPP7Q8NBV4 271 aa7.79□□□□□ -1.16
FAM49B-218ENST00000520887 SYTL4Q96C24 671 aaPredicted RBP7.79□□□□□ -1.16
FAM49B-218ENST00000520887 GPAMQ9HCL2 828 aa7.79□□□□□ -1.16
FAM49B-218ENST00000520887 BRWD3Q6RI45 1802 aa7.79□□□□□ -1.16
FAM49B-218ENST00000520887 MEGF6O75095 1541 aa7.78□□□□□ -1.16
FAM49B-218ENST00000520887 PKD1L3Q7Z443 1732 aa7.78□□□□□ -1.16
FAM49B-218ENST00000520887 PRKAR2BP31323 418 aa7.78□□□□□ -1.16
FAM49B-218ENST00000520887 RASSF7Q02833 373 aa7.78□□□□□ -1.16
FAM49B-218ENST00000520887 C4orf17Q53FE4 359 aa7.78□□□□□ -1.16
FAM49B-218ENST00000520887 TMEM151AQ8N4L1 468 aa7.78□□□□□ -1.16
FAM49B-218ENST00000520887 ENAMQ9NRM1 1142 aa7.78□□□□□ -1.16
FAM49B-218ENST00000520887 KDRP35968 1356 aa7.78□□□□□ -1.16
FAM49B-218ENST00000520887 COL3A1P02461 1466 aaPredicted RBP7.78□□□□□ -1.16
FAM49B-218ENST00000520887 NCAPD2Q15021 1401 aa7.78□□□□□ -1.16
FAM49B-218ENST00000520887 KAT6BQ8WYB5 2073 aa7.77□□□□□ -1.17
FAM49B-218ENST00000520887 MX2P20592 715 aa7.77□□□□□ -1.17
FAM49B-218ENST00000520887 TEFQ10587 303 aa7.77□□□□□ -1.17
FAM49B-218ENST00000520887 TLR1Q15399 786 aa7.77□□□□□ -1.17
FAM49B-218ENST00000520887 AKAP4Q5JQC9 854 aa7.77□□□□□ -1.17
FAM49B-218ENST00000520887 RHBDD1Q8TEB9 315 aa7.77□□□□□ -1.17
FAM49B-218ENST00000520887 TMOD3Q9NYL9 352 aa7.77□□□□□ -1.17
FAM49B-218ENST00000520887 NSFL1CQ9UNZ2 370 aaKnown RBP7.77□□□□□ -1.17
FAM49B-218ENST00000520887 GDF11O95390 407 aa7.76□□□□□ -1.17
FAM49B-218ENST00000520887 INHAP05111 366 aa7.76□□□□□ -1.17
FAM49B-218ENST00000520887 GDF10P55107 478 aa7.76□□□□□ -1.17
FAM49B-218ENST00000520887 SMARCC1Q92922 1105 aaPredicted RBP7.76□□□□□ -1.17
FAM49B-218ENST00000520887 SCARF2Q96GP6 870 aaPredicted RBP7.76□□□□□ -1.17
FAM49B-218ENST00000520887 DCAF5Q96JK2 942 aa7.76□□□□□ -1.17
FAM49B-218ENST00000520887 CFHR5Q9BXR6 569 aa7.76□□□□□ -1.17
FAM49B-218ENST00000520887 BCL9O00512 1426 aa7.76□□□□□ -1.17
FAM49B-218ENST00000520887 DOT1LQ8TEK3 1739 aa7.75□□□□□ -1.17
FAM49B-218ENST00000520887 MAP3K5Q99683 1374 aa7.75□□□□□ -1.17
FAM49B-218ENST00000520887 GNAT3A8MTJ3 354 aa7.75□□□□□ -1.17
FAM49B-218ENST00000520887 TRIM37O94972 964 aa7.75□□□□□ -1.17
FAM49B-218ENST00000520887 APBA3O96018 575 aa7.75□□□□□ -1.17
FAM49B-218ENST00000520887 THBS1P07996 1170 aa7.75□□□□□ -1.17
FAM49B-218ENST00000520887 MSX1P28360 303 aa7.75□□□□□ -1.17
FAM49B-218ENST00000520887 SCNN1DP51172 638 aa7.75□□□□□ -1.17
FAM49B-218ENST00000520887 CABP4P57796 275 aa7.75□□□□□ -1.17
FAM49B-218ENST00000520887 CALD1Q05682 793 aaKnown RBP7.75□□□□□ -1.17
FAM49B-218ENST00000520887 ILDR2Q71H61 639 aa7.75□□□□□ -1.17
FAM49B-218ENST00000520887 AEBP1Q8IUX7 1158 aa7.75□□□□□ -1.17
FAM49B-218ENST00000520887 WWC1Q8IX03 1113 aa7.75□□□□□ -1.17
FAM49B-218ENST00000520887 PGBD3Q8N328 593 aa7.75□□□□□ -1.17
FAM49B-218ENST00000520887 PHF24Q9UPV7 400 aa7.75□□□□□ -1.17
FAM49B-218ENST00000520887 NHSQ6T4R5 1651 aa7.75□□□□□ -1.17
FAM49B-218ENST00000520887 CCER2I3L3R5 266 aa7.74□□□□□ -1.17
FAM49B-218ENST00000520887 BCRP11274 1271 aa7.74□□□□□ -1.17
FAM49B-218ENST00000520887 PHKG2P15735 406 aa7.74□□□□□ -1.17
FAM49B-218ENST00000520887 IRS1P35568 1242 aa7.74□□□□□ -1.17
FAM49B-218ENST00000520887 LBRQ14739 615 aaKnown RBP7.74□□□□□ -1.17
FAM49B-218ENST00000520887 NPM2Q86SE8 214 aaKnown RBP7.74□□□□□ -1.17
FAM49B-218ENST00000520887 TTC5Q8N0Z6 440 aa7.74□□□□□ -1.17
FAM49B-218ENST00000520887 KCTD17Q8N5Z5 321 aa7.74□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms