RNA–Protein interactions for RNA: ENST00000520860.1

SRGAP3-212, Transcript of SLIT-ROBO Rho GTPase activating protein 3, humanhuman

TSL 5

Gene SRGAP3, Length 422 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRGAP3-212ENST00000520860 PHAXQ9H814 394 aaKnown RBP16.97■□□□□ 0.31
SRGAP3-212ENST00000520860 ELP3Q9H9T3 547 aa16.97■□□□□ 0.31
SRGAP3-212ENST00000520860 VEZTQ9HBM0 779 aa16.97■□□□□ 0.31
SRGAP3-212ENST00000520860 IGHMBP2P38935 993 aaKnown RBP16.96■□□□□ 0.31
SRGAP3-212ENST00000520860 KIF22Q14807 665 aa16.96■□□□□ 0.31
SRGAP3-212ENST00000520860 TTLL11Q8NHH1 800 aa16.96■□□□□ 0.31
SRGAP3-212ENST00000520860 GREM2Q9H772 168 aa16.96■□□□□ 0.31
SRGAP3-212ENST00000520860 SPEF2Q9C093 1822 aa16.96■□□□□ 0.3
SRGAP3-212ENST00000520860 KLRK1P26718 216 aa16.95■□□□□ 0.3
SRGAP3-212ENST00000520860 KCNJ4P48050 445 aa16.95■□□□□ 0.3
SRGAP3-212ENST00000520860 CFAP100Q494V2 611 aa16.95■□□□□ 0.3
SRGAP3-212ENST00000520860 MS4A4AQ96JQ5 239 aa16.95■□□□□ 0.3
SRGAP3-212ENST00000520860 METTL22Q9BUU2 404 aaPredicted RBP16.95■□□□□ 0.3
SRGAP3-212ENST00000520860 ANKRD2Q9GZV1 360 aa16.95■□□□□ 0.3
SRGAP3-212ENST00000520860 CCL15-CCL14A0A0B4J2E2 113 aa16.94■□□□□ 0.3
SRGAP3-212ENST00000520860 SPDYE2BA6NHP3 402 aa16.94■□□□□ 0.3
SRGAP3-212ENST00000520860 DDX58O95786 925 aaKnown RBP16.94■□□□□ 0.3
SRGAP3-212ENST00000520860 SPDYE6P0CI01 402 aa16.94■□□□□ 0.3
SRGAP3-212ENST00000520860 GTF2A2P52657 109 aa16.94■□□□□ 0.3
SRGAP3-212ENST00000520860 CCL15Q16663 113 aa16.94■□□□□ 0.3
SRGAP3-212ENST00000520860 BRI3BPQ8WY22 251 aa16.94■□□□□ 0.3
SRGAP3-212ENST00000520860 HTATIP2Q9BUP3 242 aa16.94■□□□□ 0.3
SRGAP3-212ENST00000520860 BRCA2P51587 3418 aa16.94■□□□□ 0.3
SRGAP3-212ENST00000520860 ECM29Q5VYK3 1845 aa16.93■□□□□ 0.3
SRGAP3-212ENST00000520860 F8W031 263 aaPredicted RBP16.93■□□□□ 0.3
SRGAP3-212ENST00000520860 RASA3Q14644 834 aa16.93■□□□□ 0.3
SRGAP3-212ENST00000520860 NKX2-3Q8TAU0 364 aa16.93■□□□□ 0.3
SRGAP3-212ENST00000520860 CD209Q9NNX6 404 aa16.93■□□□□ 0.3
SRGAP3-212ENST00000520860 PCDHAC2Q9Y5I4 1007 aa16.93■□□□□ 0.3
SRGAP3-212ENST00000520860 NR2E3Q9Y5X4 410 aa16.93■□□□□ 0.3
SRGAP3-212ENST00000520860 GNRH1P01148 92 aa16.92■□□□□ 0.3
SRGAP3-212ENST00000520860 RBM5P52756 815 aaKnown RBP eCLIP16.92■□□□□ 0.3
SRGAP3-212ENST00000520860 PRMT2P55345 433 aa16.92■□□□□ 0.3
SRGAP3-212ENST00000520860 TNFAIP1Q13829 316 aa16.92■□□□□ 0.3
SRGAP3-212ENST00000520860 CCDC146Q8IYE0 955 aa16.92■□□□□ 0.3
SRGAP3-212ENST00000520860 CERS5Q8N5B7 392 aa16.92■□□□□ 0.3
SRGAP3-212ENST00000520860 PRMT6Q96LA8 375 aaPredicted RBP16.92■□□□□ 0.3
SRGAP3-212ENST00000520860 MPHOSPH8Q99549 860 aa16.92■□□□□ 0.3
SRGAP3-212ENST00000520860 TRIM35Q9UPQ4 493 aa16.92■□□□□ 0.3
SRGAP3-212ENST00000520860 MYH3P11055 1940 aa16.92■□□□□ 0.3
SRGAP3-212ENST00000520860 LACTBP83111 547 aaPredicted RBP16.91■□□□□ 0.3
SRGAP3-212ENST00000520860 FAM43AQ8N2R8 423 aa16.91■□□□□ 0.3
SRGAP3-212ENST00000520860 SHISA4Q96DD7 197 aa16.91■□□□□ 0.3
SRGAP3-212ENST00000520860 ARHGAP39Q9C0H5 1083 aa16.91■□□□□ 0.3
SRGAP3-212ENST00000520860 SZT2Q5T011 3432 aa16.91■□□□□ 0.3
SRGAP3-212ENST00000520860 OTOFQ9HC10 1997 aa16.9■□□□□ 0.3
SRGAP3-212ENST00000520860 TLR2O60603 784 aa16.9■□□□□ 0.3
SRGAP3-212ENST00000520860 CNKSR2Q8WXI2 1034 aa16.9■□□□□ 0.3
SRGAP3-212ENST00000520860 PRO3102Q9H379 93 aa16.9■□□□□ 0.3
SRGAP3-212ENST00000520860 MBIPQ9NS73 344 aa16.9■□□□□ 0.3
SRGAP3-212ENST00000520860 MAP3K2Q9Y2U5 619 aa16.9■□□□□ 0.3
SRGAP3-212ENST00000520860 CSADQ9Y600 493 aa16.9■□□□□ 0.3
SRGAP3-212ENST00000520860 A0A1W2PPC1 479 aa16.89■□□□□ 0.29
SRGAP3-212ENST00000520860 MNX1P50219 401 aaPredicted RBP16.89■□□□□ 0.29
SRGAP3-212ENST00000520860 NEXNQ0ZGT2 675 aa16.89■□□□□ 0.29
SRGAP3-212ENST00000520860 MTFR1Q15390 333 aa16.89■□□□□ 0.29
SRGAP3-212ENST00000520860 PPP1R3FQ6ZSY5 799 aaPredicted RBP16.89■□□□□ 0.29
SRGAP3-212ENST00000520860 ELL2O00472 640 aaPredicted RBP16.88■□□□□ 0.29
SRGAP3-212ENST00000520860 ITGA6P23229 1130 aa16.88■□□□□ 0.29
SRGAP3-212ENST00000520860 FKBP1AP62942 108 aaKnown RBP16.88■□□□□ 0.29
SRGAP3-212ENST00000520860 MAP3K9P80192 1104 aa16.88■□□□□ 0.29
SRGAP3-212ENST00000520860 VGLL4Q14135 290 aa16.88■□□□□ 0.29
SRGAP3-212ENST00000520860 ZNF804AQ7Z570 1209 aa16.88■□□□□ 0.29
SRGAP3-212ENST00000520860 ZCCHC17Q9NP64 241 aaKnown RBP16.88■□□□□ 0.29
SRGAP3-212ENST00000520860 AOX1Q06278 1338 aa16.88■□□□□ 0.29
SRGAP3-212ENST00000520860 IGKV5-2P06315 115 aa16.87■□□□□ 0.29
SRGAP3-212ENST00000520860 CETPP11597 493 aa16.87■□□□□ 0.29
SRGAP3-212ENST00000520860 CHRNDQ07001 517 aa16.87■□□□□ 0.29
SRGAP3-212ENST00000520860 RUNDC1Q96C34 613 aa16.87■□□□□ 0.29
SRGAP3-212ENST00000520860 CHMP4AQ9BY43 222 aa16.87■□□□□ 0.29
SRGAP3-212ENST00000520860 ZSWIM8A7E2V4 1837 aa16.86■□□□□ 0.29
SRGAP3-212ENST00000520860 ZBTB7BO15156 539 aaPredicted RBP16.86■□□□□ 0.29
SRGAP3-212ENST00000520860 GJB1P08034 283 aa16.86■□□□□ 0.29
SRGAP3-212ENST00000520860 HOXD10P28358 340 aa16.86■□□□□ 0.29
SRGAP3-212ENST00000520860 GJA8P48165 433 aa16.86■□□□□ 0.29
SRGAP3-212ENST00000520860 SPDYE2Q495Y8 402 aa16.86■□□□□ 0.29
SRGAP3-212ENST00000520860 KSR2Q6VAB6 950 aa16.86■□□□□ 0.29
SRGAP3-212ENST00000520860 UBE3BQ7Z3V4 1068 aa16.86■□□□□ 0.29
SRGAP3-212ENST00000520860 RAET1EQ8TD07 263 aa16.86■□□□□ 0.29
SRGAP3-212ENST00000520860 ZNF70Q9UC06 446 aaPredicted RBP16.86■□□□□ 0.29
SRGAP3-212ENST00000520860 PI4KAP2A4QPH2 592 aa16.85■□□□□ 0.29
SRGAP3-212ENST00000520860 ECM2O94769 699 aaPredicted RBP16.85■□□□□ 0.29
SRGAP3-212ENST00000520860 IL1R1P14778 569 aa16.85■□□□□ 0.29
SRGAP3-212ENST00000520860 GRK4P32298 578 aa16.85■□□□□ 0.29
SRGAP3-212ENST00000520860 CCDC30Q5VVM6 783 aa16.85■□□□□ 0.29
SRGAP3-212ENST00000520860 C15orf52Q6ZUT6 534 aaKnown RBP16.85■□□□□ 0.29
SRGAP3-212ENST00000520860 UBE2Q1Q7Z7E8 422 aa16.85■□□□□ 0.29
SRGAP3-212ENST00000520860 PI4KAP1Q8N8J0 262 aa16.85■□□□□ 0.29
SRGAP3-212ENST00000520860 HELBQ8NG08 1087 aaPredicted RBP16.85■□□□□ 0.29
SRGAP3-212ENST00000520860 DDX55Q8NHQ9 600 aaKnown RBP eCLIP16.85■□□□□ 0.29
SRGAP3-212ENST00000520860 BIN2Q9UBW5 565 aaPredicted RBP16.85■□□□□ 0.29
SRGAP3-212ENST00000520860 SRRDQ9UH36 339 aa16.85■□□□□ 0.29
SRGAP3-212ENST00000520860 JAG2Q9Y219 1238 aa16.85■□□□□ 0.29
SRGAP3-212ENST00000520860 RANBP2P49792 3224 aaKnown RBP16.85■□□□□ 0.29
SRGAP3-212ENST00000520860 SPDYE5A6NIY4 337 aa16.84■□□□□ 0.29
SRGAP3-212ENST00000520860 BTBD19C9JJ37 291 aa16.84■□□□□ 0.29
SRGAP3-212ENST00000520860 SOX1O00570 391 aaPredicted RBP16.84■□□□□ 0.29
SRGAP3-212ENST00000520860 FARP2O94887 1054 aaPredicted RBP16.84■□□□□ 0.29
SRGAP3-212ENST00000520860 CCL5P13501 91 aa16.84■□□□□ 0.29
SRGAP3-212ENST00000520860 PSMC4P43686 418 aa16.84■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms