RNA–Protein interactions for RNA: ENST00000520776.5

EFCAB13-208, Transcript of EF-hand calcium binding domain 13, humanhuman

TSL 2

Gene EFCAB13, Length 1,979 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EFCAB13-208ENST00000520776 MMP20O60882 483 aa5.72□□□□□ -1.49
EFCAB13-208ENST00000520776 CYP2E1P05181 493 aaPredicted RBP5.72□□□□□ -1.49
EFCAB13-208ENST00000520776 H2AFB1P0C5Y9 115 aa5.72□□□□□ -1.49
EFCAB13-208ENST00000520776 H2AFB2P0C5Z0 115 aa5.72□□□□□ -1.49
EFCAB13-208ENST00000520776 EIF4BP23588 611 aaKnown RBP5.72□□□□□ -1.49
EFCAB13-208ENST00000520776 DMRTC2Q8IXT2 367 aaPredicted RBP5.72□□□□□ -1.49
EFCAB13-208ENST00000520776 PMEPA1Q969W9 287 aa5.72□□□□□ -1.49
EFCAB13-208ENST00000520776 SMG9Q9H0W8 520 aaKnown RBP5.72□□□□□ -1.49
EFCAB13-208ENST00000520776 C12orf49Q9H741 205 aa5.72□□□□□ -1.49
EFCAB13-208ENST00000520776 NPHS2Q9NP85 383 aa5.72□□□□□ -1.49
EFCAB13-208ENST00000520776 METTL5Q9NRN9 209 aaKnown RBP5.72□□□□□ -1.49
EFCAB13-208ENST00000520776 ERCC5P28715 1186 aaPredicted RBP5.71□□□□□ -1.49
EFCAB13-208ENST00000520776 TTC39BQ5VTQ0 682 aaPredicted RBP5.71□□□□□ -1.49
EFCAB13-208ENST00000520776 OR13H1Q8NG92 308 aa5.71□□□□□ -1.49
EFCAB13-208ENST00000520776 RNF34Q969K3 372 aa5.71□□□□□ -1.49
EFCAB13-208ENST00000520776 PLD4Q96BZ4 506 aa5.71□□□□□ -1.49
EFCAB13-208ENST00000520776 SEMA6BQ9H3T3 888 aa5.71□□□□□ -1.49
EFCAB13-208ENST00000520776 NLRP2Q9NX02 1062 aa5.71□□□□□ -1.49
EFCAB13-208ENST00000520776 MLLT1Q03111 559 aaPredicted RBP5.71□□□□□ -1.5
EFCAB13-208ENST00000520776 IGF2-ASQ6U949 168 aa5.71□□□□□ -1.5
EFCAB13-208ENST00000520776 NT5DC4Q86YG4 428 aa5.71□□□□□ -1.5
EFCAB13-208ENST00000520776 CRELD1Q96HD1 420 aa5.71□□□□□ -1.5
EFCAB13-208ENST00000520776 KRTAP9-2Q9BYQ4 174 aa5.71□□□□□ -1.5
EFCAB13-208ENST00000520776 LOC105371045A0A1W2PR82 267 aa5.7□□□□□ -1.5
EFCAB13-208ENST00000520776 DYRK3O43781 588 aa5.7□□□□□ -1.5
EFCAB13-208ENST00000520776 CES1P23141 567 aa5.7□□□□□ -1.5
EFCAB13-208ENST00000520776 ZNF76P36508 570 aa5.7□□□□□ -1.5
EFCAB13-208ENST00000520776 ZC3H6P61129 1189 aaKnown RBP5.7□□□□□ -1.5
EFCAB13-208ENST00000520776 NXPE4Q6UWF7 544 aa5.7□□□□□ -1.5
EFCAB13-208ENST00000520776 BCO2Q9BYV7 579 aa5.7□□□□□ -1.5
EFCAB13-208ENST00000520776 SALL4Q9UJQ4 1053 aa5.7□□□□□ -1.5
EFCAB13-208ENST00000520776 USP21Q9UK80 565 aa5.7□□□□□ -1.5
EFCAB13-208ENST00000520776 USP31Q70CQ4 1352 aa5.7□□□□□ -1.5
EFCAB13-208ENST00000520776 HYAL2Q12891 473 aa5.69□□□□□ -1.5
EFCAB13-208ENST00000520776 XP32Q5T750 250 aa5.69□□□□□ -1.5
EFCAB13-208ENST00000520776 KIAA0319Q5VV43 1072 aa5.69□□□□□ -1.5
EFCAB13-208ENST00000520776 PEAR1Q5VY43 1037 aaPredicted RBP5.69□□□□□ -1.5
EFCAB13-208ENST00000520776 KRTAP9-6A0A140TA67 174 aa5.69□□□□□ -1.5
EFCAB13-208ENST00000520776 GRM2Q14416 872 aa5.69□□□□□ -1.5
EFCAB13-208ENST00000520776 NAALADL2Q58DX5 795 aa5.69□□□□□ -1.5
EFCAB13-208ENST00000520776 GLIS3Q8NEA6 775 aa5.69□□□□□ -1.5
EFCAB13-208ENST00000520776 LATS2Q9NRM7 1088 aa5.69□□□□□ -1.5
EFCAB13-208ENST00000520776 USP35Q9P2H5 1018 aa5.69□□□□□ -1.5
EFCAB13-208ENST00000520776 KANSL3Q9P2N6 904 aa5.69□□□□□ -1.5
EFCAB13-208ENST00000520776 A0A1W2PP55 124 aa5.68□□□□□ -1.5
EFCAB13-208ENST00000520776 GADD45BO75293 160 aaPredicted RBP5.68□□□□□ -1.5
EFCAB13-208ENST00000520776 KIF4AO95239 1232 aa5.68□□□□□ -1.5
EFCAB13-208ENST00000520776 KRTAP1-3Q8IUG1 177 aa5.68□□□□□ -1.5
EFCAB13-208ENST00000520776 SPACA7Q96KW9 195 aa5.68□□□□□ -1.5
EFCAB13-208ENST00000520776 NSUN5Q96P11 429 aaKnown RBP5.68□□□□□ -1.5
EFCAB13-208ENST00000520776 FAM8A1Q9UBU6 413 aa5.68□□□□□ -1.5
EFCAB13-208ENST00000520776 DLL1O00548 723 aa5.67□□□□□ -1.5
EFCAB13-208ENST00000520776 USP17L7P0C7H9 530 aa5.67□□□□□ -1.5
EFCAB13-208ENST00000520776 PTPN12Q05209 780 aaKnown RBP5.67□□□□□ -1.5
EFCAB13-208ENST00000520776 COL13A1Q5TAT6 717 aaPredicted RBP5.67□□□□□ -1.5
EFCAB13-208ENST00000520776 MEI1Q5TIA1 1274 aa5.67□□□□□ -1.5
EFCAB13-208ENST00000520776 HFE2Q6ZVN8 426 aa5.67□□□□□ -1.5
EFCAB13-208ENST00000520776 SSBP4Q9BWG4 385 aaPredicted RBP5.67□□□□□ -1.5
EFCAB13-208ENST00000520776 SRCIN1Q9C0H9 1055 aa5.67□□□□□ -1.5
EFCAB13-208ENST00000520776 TGIF2Q9GZN2 237 aa5.67□□□□□ -1.5
EFCAB13-208ENST00000520776 MRPL18Q9H0U6 180 aaKnown RBP5.67□□□□□ -1.5
EFCAB13-208ENST00000520776 SMNDC1O75940 238 aaKnown RBP eCLIP5.67□□□□□ -1.5
EFCAB13-208ENST00000520776 ITGB7P26010 798 aa5.67□□□□□ -1.5
EFCAB13-208ENST00000520776 TAF1CQ15572 869 aaPredicted RBP5.67□□□□□ -1.5
EFCAB13-208ENST00000520776 SHISA2Q6UWI4 295 aa5.67□□□□□ -1.5
EFCAB13-208ENST00000520776 TMEM130Q8N3G9 435 aa5.67□□□□□ -1.5
EFCAB13-208ENST00000520776 EDN3P14138 238 aa5.66□□□□□ -1.5
EFCAB13-208ENST00000520776 IL22RA1Q8N6P7 574 aa5.66□□□□□ -1.5
EFCAB13-208ENST00000520776 J3QW42 95 aa5.66□□□□□ -1.5
EFCAB13-208ENST00000520776 DEAF1O75398 565 aaPredicted RBP5.66□□□□□ -1.5
EFCAB13-208ENST00000520776 ST13P50502 369 aaKnown RBP5.66□□□□□ -1.5
EFCAB13-208ENST00000520776 RACK1P63244 317 aaKnown RBP5.66□□□□□ -1.5
EFCAB13-208ENST00000520776 SLC51AQ86UW1 340 aa5.66□□□□□ -1.5
EFCAB13-208ENST00000520776 Q8N3U1 123 aa5.66□□□□□ -1.5
EFCAB13-208ENST00000520776 C3orf58Q8NDZ4 430 aa5.66□□□□□ -1.5
EFCAB13-208ENST00000520776 WFDC12Q8WWY7 111 aa5.66□□□□□ -1.5
EFCAB13-208ENST00000520776 EHD4Q9H223 541 aa5.66□□□□□ -1.5
EFCAB13-208ENST00000520776 DDX41Q9UJV9 622 aaKnown RBP5.66□□□□□ -1.5
EFCAB13-208ENST00000520776 PPME1Q9Y570 386 aa5.66□□□□□ -1.5
EFCAB13-208ENST00000520776 ZMYM1Q5SVZ6 1142 aa5.65□□□□□ -1.51
EFCAB13-208ENST00000520776 GDF6Q6KF10 455 aaPredicted RBP5.65□□□□□ -1.51
EFCAB13-208ENST00000520776 CEP120Q8N960 986 aa5.65□□□□□ -1.51
EFCAB13-208ENST00000520776 TCF12Q99081 682 aa5.65□□□□□ -1.51
EFCAB13-208ENST00000520776 ACBD3Q9H3P7 528 aa5.65□□□□□ -1.51
EFCAB13-208ENST00000520776 EPB41L3Q9Y2J2 1087 aaPredicted RBP5.65□□□□□ -1.51
EFCAB13-208ENST00000520776 FAM177BA6PVY3 158 aa5.64□□□□□ -1.51
EFCAB13-208ENST00000520776 ACPPP15309 386 aa5.64□□□□□ -1.51
EFCAB13-208ENST00000520776 ZNF394Q53GI3 561 aa5.64□□□□□ -1.51
EFCAB13-208ENST00000520776 PRPF40BQ6NWY9 871 aaKnown RBP5.64□□□□□ -1.51
EFCAB13-208ENST00000520776 SREK1Q8WXA9 508 aaKnown RBP5.64□□□□□ -1.51
EFCAB13-208ENST00000520776 TP53INP1Q96A56 240 aa5.64□□□□□ -1.51
EFCAB13-208ENST00000520776 DRC1Q96MC2 740 aa5.64□□□□□ -1.51
EFCAB13-208ENST00000520776 TINF2Q9BSI4 451 aa5.64□□□□□ -1.51
EFCAB13-208ENST00000520776 AKTIPQ9H8T0 292 aa5.64□□□□□ -1.51
EFCAB13-208ENST00000520776 TRAK1Q9UPV9 953 aa5.64□□□□□ -1.51
EFCAB13-208ENST00000520776 NFKBIEO00221 500 aa5.64□□□□□ -1.51
EFCAB13-208ENST00000520776 TRPA1O75762 1119 aa5.64□□□□□ -1.51
EFCAB13-208ENST00000520776 NOS3P29474 1203 aa5.64□□□□□ -1.51
EFCAB13-208ENST00000520776 GSTT1P30711 240 aa5.64□□□□□ -1.51
EFCAB13-208ENST00000520776 Q6ZS46 218 aa5.64□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms