RNA–Protein interactions for RNA: ENST00000520234.1

HMGB1P41-201, Transcript of high mobility group box 1 pseudogene 41, humanhuman

BASIC

Gene HMGB1P41, Length 440 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P41-201ENST00000520234 CES1P23141 567 aa5.77□□□□□ -1.49
HMGB1P41-201ENST00000520234 GPLD1P80108 840 aa5.77□□□□□ -1.49
HMGB1P41-201ENST00000520234 HYAL2Q12891 473 aa5.77□□□□□ -1.49
HMGB1P41-201ENST00000520234 ZFYVE28Q9HCC9 887 aa5.77□□□□□ -1.49
HMGB1P41-201ENST00000520234 DNAJB12Q9NXW2 375 aaKnown RBP5.77□□□□□ -1.49
HMGB1P41-201ENST00000520234 PODXL2Q9NZ53 605 aa5.77□□□□□ -1.49
HMGB1P41-201ENST00000520234 CNTN3Q9P232 1028 aa5.77□□□□□ -1.49
HMGB1P41-201ENST00000520234 CPNE3O75131 537 aaKnown RBP5.76□□□□□ -1.49
HMGB1P41-201ENST00000520234 ALX3O95076 343 aa5.76□□□□□ -1.49
HMGB1P41-201ENST00000520234 FGD1P98174 961 aa5.76□□□□□ -1.49
HMGB1P41-201ENST00000520234 FMR1Q06787 632 aaKnown RBP eCLIP5.76□□□□□ -1.49
HMGB1P41-201ENST00000520234 WFDC8Q8IUA0 241 aa5.76□□□□□ -1.49
HMGB1P41-201ENST00000520234 C1orf127Q8N9H9 656 aa5.76□□□□□ -1.49
HMGB1P41-201ENST00000520234 CSRNP1Q96S65 589 aa5.76□□□□□ -1.49
HMGB1P41-201ENST00000520234 DBNDD2Q9BQY9 259 aa5.76□□□□□ -1.49
HMGB1P41-201ENST00000520234 IGFLR1Q9H665 355 aa5.76□□□□□ -1.49
HMGB1P41-201ENST00000520234 LOC102724428A0A0B4J2F2 783 aa5.75□□□□□ -1.49
HMGB1P41-201ENST00000520234 EIF1AYO14602 144 aaKnown RBP5.75□□□□□ -1.49
HMGB1P41-201ENST00000520234 DHX15O43143 795 aaKnown RBP5.75□□□□□ -1.49
HMGB1P41-201ENST00000520234 DEAF1O75398 565 aaPredicted RBP5.75□□□□□ -1.49
HMGB1P41-201ENST00000520234 SIK1P57059 783 aa5.75□□□□□ -1.49
HMGB1P41-201ENST00000520234 GRIK5Q16478 980 aa5.75□□□□□ -1.49
HMGB1P41-201ENST00000520234 KRTAP19-4Q3LI73 84 aa5.75□□□□□ -1.49
HMGB1P41-201ENST00000520234 SPACA7Q96KW9 195 aa5.75□□□□□ -1.49
HMGB1P41-201ENST00000520234 RBSNQ9H1K0 784 aa5.75□□□□□ -1.49
HMGB1P41-201ENST00000520234 CHRDQ9H2X0 955 aa5.75□□□□□ -1.49
HMGB1P41-201ENST00000520234 FRRS1LQ9P0K9 344 aa5.75□□□□□ -1.49
HMGB1P41-201ENST00000520234 FOXD3Q9UJU5 478 aaPredicted RBP5.75□□□□□ -1.49
HMGB1P41-201ENST00000520234 AMOTL2Q9Y2J4 779 aa5.75□□□□□ -1.49
HMGB1P41-201ENST00000520234 NCANO14594 1321 aa5.74□□□□□ -1.49
HMGB1P41-201ENST00000520234 ZBTB42B2RXF5 422 aa5.74□□□□□ -1.49
HMGB1P41-201ENST00000520234 KIF4AO95239 1232 aa5.74□□□□□ -1.49
HMGB1P41-201ENST00000520234 EDN3P14138 238 aa5.74□□□□□ -1.49
HMGB1P41-201ENST00000520234 ORC1Q13415 861 aa5.74□□□□□ -1.49
HMGB1P41-201ENST00000520234 ENOX2Q16206 610 aaKnown RBP5.74□□□□□ -1.49
HMGB1P41-201ENST00000520234 FAM35AQ86V20 835 aa5.74□□□□□ -1.49
HMGB1P41-201ENST00000520234 NCAPG2Q86XI2 1143 aa5.74□□□□□ -1.49
HMGB1P41-201ENST00000520234 NPAS4Q8IUM7 802 aa5.74□□□□□ -1.49
HMGB1P41-201ENST00000520234 GALNT12Q8IXK2 581 aa5.74□□□□□ -1.49
HMGB1P41-201ENST00000520234 KRTAP9-3Q9BYQ3 159 aa5.74□□□□□ -1.49
HMGB1P41-201ENST00000520234 SALL4Q9UJQ4 1053 aa5.74□□□□□ -1.49
HMGB1P41-201ENST00000520234 PRRG2O14669 202 aa5.73□□□□□ -1.49
HMGB1P41-201ENST00000520234 EREGO14944 169 aa5.73□□□□□ -1.49
HMGB1P41-201ENST00000520234 GHRHP01286 108 aa5.73□□□□□ -1.49
HMGB1P41-201ENST00000520234 CYP2E1P05181 493 aaPredicted RBP5.73□□□□□ -1.49
HMGB1P41-201ENST00000520234 P4HBP07237 508 aaKnown RBP5.73□□□□□ -1.49
HMGB1P41-201ENST00000520234 GLB1P16278 677 aa5.73□□□□□ -1.49
HMGB1P41-201ENST00000520234 ATP2B2Q01814 1243 aa5.73□□□□□ -1.49
HMGB1P41-201ENST00000520234 EAPPQ56P03 285 aaPredicted RBP5.73□□□□□ -1.49
HMGB1P41-201ENST00000520234 RNF43Q68DV7 783 aa5.73□□□□□ -1.49
HMGB1P41-201ENST00000520234 ALG1LQ6GMV1 187 aa5.73□□□□□ -1.49
HMGB1P41-201ENST00000520234 DCAF11Q8TEB1 546 aa5.73□□□□□ -1.49
HMGB1P41-201ENST00000520234 FBF1Q8TES7 1133 aa5.73□□□□□ -1.49
HMGB1P41-201ENST00000520234 TTC9Q92623 222 aa5.73□□□□□ -1.49
HMGB1P41-201ENST00000520234 NSUN5Q96P11 429 aaKnown RBP5.73□□□□□ -1.49
HMGB1P41-201ENST00000520234 ANGEL1Q9UNK9 670 aaKnown RBP5.73□□□□□ -1.49
HMGB1P41-201ENST00000520234 MAPK8P45983 427 aa5.72□□□□□ -1.49
HMGB1P41-201ENST00000520234 MLLT1Q03111 559 aaPredicted RBP5.72□□□□□ -1.49
HMGB1P41-201ENST00000520234 ZNF648Q5T619 568 aaPredicted RBP5.72□□□□□ -1.49
HMGB1P41-201ENST00000520234 ELMSAN1Q6PJG2 1045 aa5.72□□□□□ -1.49
HMGB1P41-201ENST00000520234 CEP120Q8N960 986 aa5.72□□□□□ -1.49
HMGB1P41-201ENST00000520234 KANSL3Q9P2N6 904 aa5.72□□□□□ -1.49
HMGB1P41-201ENST00000520234 PNMA6FA0A0J9YX94 578 aa5.71□□□□□ -1.5
HMGB1P41-201ENST00000520234 J3QW42 95 aa5.71□□□□□ -1.5
HMGB1P41-201ENST00000520234 PRPF40AO75400 957 aaKnown RBP5.71□□□□□ -1.5
HMGB1P41-201ENST00000520234 LDHBP07195 334 aaKnown RBP5.71□□□□□ -1.5
HMGB1P41-201ENST00000520234 CPB1P15086 417 aa5.71□□□□□ -1.5
HMGB1P41-201ENST00000520234 EIF2AK2P19525 551 aaKnown RBP5.71□□□□□ -1.5
HMGB1P41-201ENST00000520234 ZNF124Q15973 351 aa5.71□□□□□ -1.5
HMGB1P41-201ENST00000520234 PERM1Q5SV97 790 aa5.71□□□□□ -1.5
HMGB1P41-201ENST00000520234 COL13A1Q5TAT6 717 aaPredicted RBP5.71□□□□□ -1.5
HMGB1P41-201ENST00000520234 CACTIN-AS1Q8N1I8 211 aa5.71□□□□□ -1.5
HMGB1P41-201ENST00000520234 CCDC74AQ96AQ1 378 aa5.71□□□□□ -1.5
HMGB1P41-201ENST00000520234 LPIN3Q9BQK8 851 aa5.71□□□□□ -1.5
HMGB1P41-201ENST00000520234 SMNDC1O75940 238 aaKnown RBP eCLIP5.7□□□□□ -1.5
HMGB1P41-201ENST00000520234 PKN1Q16512 942 aa5.7□□□□□ -1.5
HMGB1P41-201ENST00000520234 UVSSAQ2YD98 709 aa5.7□□□□□ -1.5
HMGB1P41-201ENST00000520234 KIAA0319Q5VV43 1072 aa5.7□□□□□ -1.5
HMGB1P41-201ENST00000520234 USPL1Q5W0Q7 1092 aa5.7□□□□□ -1.5
HMGB1P41-201ENST00000520234 HFE2Q6ZVN8 426 aa5.7□□□□□ -1.5
HMGB1P41-201ENST00000520234 FBXO33Q7Z6M2 555 aa5.7□□□□□ -1.5
HMGB1P41-201ENST00000520234 RGS22Q8NE09 1264 aa5.7□□□□□ -1.5
HMGB1P41-201ENST00000520234 PLD4Q96BZ4 506 aa5.7□□□□□ -1.5
HMGB1P41-201ENST00000520234 FRMD6Q96NE9 622 aa5.7□□□□□ -1.5
HMGB1P41-201ENST00000520234 PBX4Q9BYU1 374 aa5.7□□□□□ -1.5
HMGB1P41-201ENST00000520234 C7orf69Q9H7B7 122 aa5.7□□□□□ -1.5
HMGB1P41-201ENST00000520234 SRA1Q9HD15 236 aaKnown RBP5.7□□□□□ -1.5
HMGB1P41-201ENST00000520234 NLRP2Q9NX02 1062 aa5.7□□□□□ -1.5
HMGB1P41-201ENST00000520234 GIPC1O14908 333 aa5.69□□□□□ -1.5
HMGB1P41-201ENST00000520234 POLR3DP05423 398 aaPredicted RBP5.69□□□□□ -1.5
HMGB1P41-201ENST00000520234 ZNF865P0CJ78 1059 aaPredicted RBP5.69□□□□□ -1.5
HMGB1P41-201ENST00000520234 ITGAEP38570 1179 aa5.69□□□□□ -1.5
HMGB1P41-201ENST00000520234 ZNF326Q5BKZ1 582 aaKnown RBP5.69□□□□□ -1.5
HMGB1P41-201ENST00000520234 LILRA6Q6PI73 481 aa5.69□□□□□ -1.5
HMGB1P41-201ENST00000520234 FBXL18Q96ME1 805 aa5.69□□□□□ -1.5
HMGB1P41-201ENST00000520234 OSMRQ99650 979 aa5.69□□□□□ -1.5
HMGB1P41-201ENST00000520234 BCL2L13Q9BXK5 485 aa5.69□□□□□ -1.5
HMGB1P41-201ENST00000520234 SMG9Q9H0W8 520 aaKnown RBP5.69□□□□□ -1.5
HMGB1P41-201ENST00000520234 BCL11AQ9H165 835 aa5.69□□□□□ -1.5
HMGB1P41-201ENST00000520234 DZANK1Q9NVP4 752 aa5.69□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms