RNA–Protein interactions for RNA: ENST00000520233.1

SDC2-205, Transcript of syndecan 2, humanhuman

TSL 4

Gene SDC2, Length 563 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDC2-205ENST00000520233 PDS5AQ29RF7 1337 aaKnown RBP21.71■■□□□ 1.07
SDC2-205ENST00000520233 HAUS7Q99871 368 aa21.7■■□□□ 1.06
SDC2-205ENST00000520233 YDJCA8MPS7 323 aa21.69■■□□□ 1.06
SDC2-205ENST00000520233 FAM205AQ6ZU69 1335 aa21.69■■□□□ 1.06
SDC2-205ENST00000520233 ZAP70P43403 619 aa21.68■■□□□ 1.06
SDC2-205ENST00000520233 PI16Q6UXB8 463 aa21.68■■□□□ 1.06
SDC2-205ENST00000520233 SNRKQ9NRH2 765 aa21.68■■□□□ 1.06
SDC2-205ENST00000520233 RNF181Q9P0P0 153 aa21.68■■□□□ 1.06
SDC2-205ENST00000520233 COL1A1P02452 1464 aaPredicted RBP21.68■■□□□ 1.06
SDC2-205ENST00000520233 SBF1O95248 1867 aa21.67■■□□□ 1.06
SDC2-205ENST00000520233 FZD9O00144 591 aa21.67■■□□□ 1.06
SDC2-205ENST00000520233 GTF2IP78347 998 aa21.67■■□□□ 1.06
SDC2-205ENST00000520233 CHAF1AQ13111 956 aaPredicted RBP21.67■■□□□ 1.06
SDC2-205ENST00000520233 TTC22Q5TAA0 569 aa21.67■■□□□ 1.06
SDC2-205ENST00000520233 STRIP1Q5VSL9 837 aa21.67■■□□□ 1.06
SDC2-205ENST00000520233 C9orf131Q5VYM1 1079 aa21.67■■□□□ 1.06
SDC2-205ENST00000520233 WDR66Q8TBY9 1149 aa21.67■■□□□ 1.06
SDC2-205ENST00000520233 KCNQ5Q9NR82 932 aa21.67■■□□□ 1.06
SDC2-205ENST00000520233 USP17L3A6NCW0 530 aa21.66■■□□□ 1.06
SDC2-205ENST00000520233 USP17L4A6NCW7 530 aa21.66■■□□□ 1.06
SDC2-205ENST00000520233 TTLL5Q6EMB2 1281 aa21.66■■□□□ 1.06
SDC2-205ENST00000520233 USP17L1Q7RTZ2 530 aa21.66■■□□□ 1.06
SDC2-205ENST00000520233 DNAJC2Q99543 621 aaKnown RBP21.66■■□□□ 1.06
SDC2-205ENST00000520233 SALL1Q9NSC2 1324 aa21.65■■□□□ 1.06
SDC2-205ENST00000520233 CYP2E1P05181 493 aaPredicted RBP21.65■■□□□ 1.06
SDC2-205ENST00000520233 TBC1D22AQ8WUA7 517 aa21.65■■□□□ 1.06
SDC2-205ENST00000520233 PAG1Q9NWQ8 432 aa21.65■■□□□ 1.06
SDC2-205ENST00000520233 NDUFB9Q9Y6M9 179 aa21.65■■□□□ 1.06
SDC2-205ENST00000520233 AKAP11Q9UKA4 1901 aa21.65■■□□□ 1.06
SDC2-205ENST00000520233 DICER1Q9UPY3 1922 aaKnown RBP21.65■■□□□ 1.06
SDC2-205ENST00000520233 CCDC88AQ3V6T2 1871 aa21.64■■□□□ 1.06
SDC2-205ENST00000520233 EIF6P56537 245 aaKnown RBP21.64■■□□□ 1.05
SDC2-205ENST00000520233 FKBP1AP62942 108 aaKnown RBP21.64■■□□□ 1.05
SDC2-205ENST00000520233 CXCL9Q07325 125 aa21.64■■□□□ 1.05
SDC2-205ENST00000520233 TTF1Q15361 905 aaPredicted RBP21.64■■□□□ 1.05
SDC2-205ENST00000520233 FBXW7Q969H0 707 aa21.64■■□□□ 1.05
SDC2-205ENST00000520233 JAG2Q9Y219 1238 aa21.64■■□□□ 1.05
SDC2-205ENST00000520233 CHD4Q14839 1912 aa21.64■■□□□ 1.05
SDC2-205ENST00000520233 GOLIM4O00461 696 aa21.63■■□□□ 1.05
SDC2-205ENST00000520233 RAD17O75943 681 aa21.63■■□□□ 1.05
SDC2-205ENST00000520233 GSPT1P15170 499 aaKnown RBP21.63■■□□□ 1.05
SDC2-205ENST00000520233 TNIP1Q15025 636 aa21.63■■□□□ 1.05
SDC2-205ENST00000520233 DACT2Q5SW24 774 aa21.63■■□□□ 1.05
SDC2-205ENST00000520233 CIAPIN1Q6FI81 312 aa21.63■■□□□ 1.05
SDC2-205ENST00000520233 ZGPATQ8N5A5 531 aaKnown RBP21.63■■□□□ 1.05
SDC2-205ENST00000520233 ANTXR1Q9H6X2 564 aa21.63■■□□□ 1.05
SDC2-205ENST00000520233 MYH13Q9UKX3 1938 aa21.63■■□□□ 1.05
SDC2-205ENST00000520233 SCN9AQ15858 1988 aa21.62■■□□□ 1.05
SDC2-205ENST00000520233 MAP4K4O95819 1239 aaPredicted RBP21.62■■□□□ 1.05
SDC2-205ENST00000520233 VIL1P09327 827 aaKnown RBP21.62■■□□□ 1.05
SDC2-205ENST00000520233 MFSD14BQ5SR56 506 aa21.62■■□□□ 1.05
SDC2-205ENST00000520233 EVI5LQ96CN4 794 aa21.62■■□□□ 1.05
SDC2-205ENST00000520233 EDC3Q96F86 508 aaKnown RBP21.62■■□□□ 1.05
SDC2-205ENST00000520233 ZC3H4Q9UPT8 1303 aaKnown RBP21.61■■□□□ 1.05
SDC2-205ENST00000520233 TRIM6-TRIM34B2RNG4 842 aa21.61■■□□□ 1.05
SDC2-205ENST00000520233 PSMD14O00487 310 aa21.61■■□□□ 1.05
SDC2-205ENST00000520233 IGSF3O75054 1194 aa21.61■■□□□ 1.05
SDC2-205ENST00000520233 BMP2KLQ5H9B9 411 aa21.61■■□□□ 1.05
SDC2-205ENST00000520233 SPTY2D1Q68D10 685 aaPredicted RBP21.61■■□□□ 1.05
SDC2-205ENST00000520233 TBC1D9Q6ZT07 1266 aa21.61■■□□□ 1.05
SDC2-205ENST00000520233 CNTROBQ8N137 903 aa21.61■■□□□ 1.05
SDC2-205ENST00000520233 PIH1D3Q9NQM4 214 aaKnown RBP21.61■■□□□ 1.05
SDC2-205ENST00000520233 MYO3BQ8WXR4 1341 aa21.6■■□□□ 1.05
SDC2-205ENST00000520233 PSME4Q14997 1843 aa21.6■■□□□ 1.05
SDC2-205ENST00000520233 RSBN1LQ6PCB5 846 aaPredicted RBP21.6■■□□□ 1.05
SDC2-205ENST00000520233 CERS5Q8N5B7 392 aa21.6■■□□□ 1.05
SDC2-205ENST00000520233 KBTBD3Q8NAB2 608 aa21.6■■□□□ 1.05
SDC2-205ENST00000520233 ABCF2Q9UG63 623 aa21.6■■□□□ 1.05
SDC2-205ENST00000520233 SUGT1Q9Y2Z0 365 aa21.6■■□□□ 1.05
SDC2-205ENST00000520233 ZNF541Q9H0D2 1346 aa21.59■■□□□ 1.05
SDC2-205ENST00000520233 SDSP20132 328 aa21.59■■□□□ 1.05
SDC2-205ENST00000520233 TIAM2Q8IVF5 1701 aa21.59■■□□□ 1.05
SDC2-205ENST00000520233 RILPL2Q969X0 211 aa21.59■■□□□ 1.05
SDC2-205ENST00000520233 LRP2BPQ9P2M1 347 aa21.59■■□□□ 1.05
SDC2-205ENST00000520233 ZNF646O15015 1829 aaPredicted RBP21.59■■□□□ 1.05
SDC2-205ENST00000520233 LDHBP07195 334 aaKnown RBP21.58■■□□□ 1.05
SDC2-205ENST00000520233 ERICH6Q7L0X2 663 aa21.58■■□□□ 1.05
SDC2-205ENST00000520233 AGBL3Q8NEM8 1001 aa21.58■■□□□ 1.05
SDC2-205ENST00000520233 MXD3Q9BW11 206 aa21.58■■□□□ 1.05
SDC2-205ENST00000520233 PRDX5P30044 214 aa21.57■■□□□ 1.04
SDC2-205ENST00000520233 MAP3K12Q12852 859 aa21.57■■□□□ 1.04
SDC2-205ENST00000520233 TICAM2Q86XR7 235 aa21.57■■□□□ 1.04
SDC2-205ENST00000520233 GPC2Q8N158 579 aa21.57■■□□□ 1.04
SDC2-205ENST00000520233 GMLQ99445 158 aa21.57■■□□□ 1.04
SDC2-205ENST00000520233 RAI14Q9P0K7 980 aa21.57■■□□□ 1.04
SDC2-205ENST00000520233 IDH1O75874 414 aaKnown RBP21.56■■□□□ 1.04
SDC2-205ENST00000520233 RPS12P25398 132 aaKnown RBP21.56■■□□□ 1.04
SDC2-205ENST00000520233 GRIK5Q16478 980 aa21.56■■□□□ 1.04
SDC2-205ENST00000520233 FSD1Q9BTV5 496 aa21.56■■□□□ 1.04
SDC2-205ENST00000520233 DDX24Q9GZR7 859 aaKnown RBP eCLIP21.56■■□□□ 1.04
SDC2-205ENST00000520233 GJA3Q9Y6H8 435 aa21.56■■□□□ 1.04
SDC2-205ENST00000520233 LRRFIP1Q32MZ4 808 aaKnown RBP21.55■■□□□ 1.04
SDC2-205ENST00000520233 ZSCAN25Q6NSZ9 544 aa21.55■■□□□ 1.04
SDC2-205ENST00000520233 DPY19L2Q6NUT2 758 aa21.55■■□□□ 1.04
SDC2-205ENST00000520233 TMED8Q6PL24 325 aaPredicted RBP21.55■■□□□ 1.04
SDC2-205ENST00000520233 ZBTB12Q9Y330 459 aaPredicted RBP21.55■■□□□ 1.04
SDC2-205ENST00000520233 DOCK2Q92608 1830 aa21.55■■□□□ 1.04
SDC2-205ENST00000520233 RFX7Q2KHR2 1363 aa21.54■■□□□ 1.04
SDC2-205ENST00000520233 MECOMQ03112 1051 aa21.54■■□□□ 1.04
SDC2-205ENST00000520233 DZIP1Q86YF9 867 aaKnown RBP21.54■■□□□ 1.04
Retrieved 100 of 20,778 RNA–protein pairs in 68.6 ms