RNA–Protein interactions for RNA: ENST00000519607.5

NUDCD1-203, Transcript of NudC domain containing 1, humanhuman

TSL 1 (best)

Gene NUDCD1, Length 2,286 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUDCD1-203ENST00000519607 STK38Q15208 465 aa13.23□□□□□ -0.29
NUDCD1-203ENST00000519607 SYNE3Q6ZMZ3 975 aa13.23□□□□□ -0.29
NUDCD1-203ENST00000519607 TOM1L2Q6ZVM7 507 aa13.23□□□□□ -0.29
NUDCD1-203ENST00000519607 BRAPQ7Z569 592 aa13.23□□□□□ -0.29
NUDCD1-203ENST00000519607 SMAP1Q8IYB5 467 aaPredicted RBP13.23□□□□□ -0.29
NUDCD1-203ENST00000519607 NCOA7Q8NI08 942 aa13.23□□□□□ -0.29
NUDCD1-203ENST00000519607 CACTINQ8WUQ7 758 aaKnown RBP13.23□□□□□ -0.29
NUDCD1-203ENST00000519607 TSC1Q92574 1164 aa13.23□□□□□ -0.29
NUDCD1-203ENST00000519607 GOLPH3LQ9H4A5 285 aa13.23□□□□□ -0.29
NUDCD1-203ENST00000519607 GLI3P10071 1580 aa13.23□□□□□ -0.29
NUDCD1-203ENST00000519607 SPATA31A3Q5VYP0 1347 aa13.22□□□□□ -0.29
NUDCD1-203ENST00000519607 TPM4P67936 248 aa13.22□□□□□ -0.29
NUDCD1-203ENST00000519607 SYCP1Q15431 976 aa13.22□□□□□ -0.29
NUDCD1-203ENST00000519607 OSBP2Q969R2 916 aa13.22□□□□□ -0.29
NUDCD1-203ENST00000519607 FTOQ9C0B1 505 aaKnown RBP eCLIP13.22□□□□□ -0.29
NUDCD1-203ENST00000519607 ABCC12Q96J65 1359 aa13.22□□□□□ -0.29
NUDCD1-203ENST00000519607 DHX8Q14562 1220 aaKnown RBP13.22□□□□□ -0.29
NUDCD1-203ENST00000519607 RGS22Q8NE09 1264 aa13.22□□□□□ -0.29
NUDCD1-203ENST00000519607 APPBP2Q92624 585 aa13.22□□□□□ -0.29
NUDCD1-203ENST00000519607 XAGE2Q96GT9 111 aa13.22□□□□□ -0.29
NUDCD1-203ENST00000519607 DDX24Q9GZR7 859 aaKnown RBP eCLIP13.22□□□□□ -0.29
NUDCD1-203ENST00000519607 PCDHA7Q9UN72 937 aa13.22□□□□□ -0.29
NUDCD1-203ENST00000519607 MYH7P12883 1935 aa13.21□□□□□ -0.29
NUDCD1-203ENST00000519607 ZNF213O14771 459 aa13.21□□□□□ -0.29
NUDCD1-203ENST00000519607 PRC1O43663 620 aa13.21□□□□□ -0.29
NUDCD1-203ENST00000519607 YEATS4O95619 227 aa13.21□□□□□ -0.29
NUDCD1-203ENST00000519607 GSDMDP57764 484 aa13.21□□□□□ -0.29
NUDCD1-203ENST00000519607 TRDNQ13061 729 aa13.21□□□□□ -0.29
NUDCD1-203ENST00000519607 TTLL5Q6EMB2 1281 aa13.21□□□□□ -0.29
NUDCD1-203ENST00000519607 CCDC112Q8NEF3 446 aa13.21□□□□□ -0.29
NUDCD1-203ENST00000519607 PUS3Q9BZE2 481 aaKnown RBP13.21□□□□□ -0.29
NUDCD1-203ENST00000519607 POLR3EQ9NVU0 708 aa13.21□□□□□ -0.29
NUDCD1-203ENST00000519607 WDR17Q8IZU2 1322 aa13.21□□□□□ -0.3
NUDCD1-203ENST00000519607 WDR19Q8NEZ3 1342 aa13.21□□□□□ -0.3
NUDCD1-203ENST00000519607 KLF18A0A0U1RQI7 1052 aa13.2□□□□□ -0.3
NUDCD1-203ENST00000519607 FGAP02671 866 aa13.2□□□□□ -0.3
NUDCD1-203ENST00000519607 FDPSP14324 419 aaKnown RBP13.2□□□□□ -0.3
NUDCD1-203ENST00000519607 RBM6P78332 1123 aaKnown RBP13.2□□□□□ -0.3
NUDCD1-203ENST00000519607 IFIT5Q13325 482 aaKnown RBP13.2□□□□□ -0.3
NUDCD1-203ENST00000519607 TCIRG1Q13488 830 aa13.2□□□□□ -0.3
NUDCD1-203ENST00000519607 PPP4R3BQ5MIZ7 849 aa13.2□□□□□ -0.3
NUDCD1-203ENST00000519607 FMR1NBQ8N0W7 255 aaPredicted RBP13.2□□□□□ -0.3
NUDCD1-203ENST00000519607 ORC3Q9UBD5 711 aaPredicted RBP13.2□□□□□ -0.3
NUDCD1-203ENST00000519607 A0A0G2JLW4 131 aa13.2□□□□□ -0.3
NUDCD1-203ENST00000519607 GOLGA8BA8MQT2 603 aa13.2□□□□□ -0.3
NUDCD1-203ENST00000519607 NKX1-1Q15270 411 aaPredicted RBP13.2□□□□□ -0.3
NUDCD1-203ENST00000519607 CCDC144BQ3MJ40 725 aa13.2□□□□□ -0.3
NUDCD1-203ENST00000519607 DHX40Q8IX18 779 aaKnown RBP13.2□□□□□ -0.3
NUDCD1-203ENST00000519607 CCDC144CPQ8IYA2 1237 aa13.2□□□□□ -0.3
NUDCD1-203ENST00000519607 LINC00301Q8NCQ3 95 aa13.2□□□□□ -0.3
NUDCD1-203ENST00000519607 FBXO18Q8NFZ0 1043 aa13.2□□□□□ -0.3
NUDCD1-203ENST00000519607 ANKRD7Q92527 254 aa13.2□□□□□ -0.3
NUDCD1-203ENST00000519607 ISCA1Q9BUE6 129 aa13.2□□□□□ -0.3
NUDCD1-203ENST00000519607 PRDM11Q9NQV5 511 aa13.2□□□□□ -0.3
NUDCD1-203ENST00000519607 FAM177BA6PVY3 158 aa13.19□□□□□ -0.3
NUDCD1-203ENST00000519607 SPTLC2O15270 562 aa13.19□□□□□ -0.3
NUDCD1-203ENST00000519607 NRDCO43847 1150 aa13.19□□□□□ -0.3
NUDCD1-203ENST00000519607 SKILP12757 684 aa13.19□□□□□ -0.3
NUDCD1-203ENST00000519607 HAND2P61296 217 aa13.19□□□□□ -0.3
NUDCD1-203ENST00000519607 TRIM28Q13263 835 aaKnown RBP13.19□□□□□ -0.3
NUDCD1-203ENST00000519607 KIF6Q6ZMV9 814 aa13.19□□□□□ -0.3
NUDCD1-203ENST00000519607 ILDR1Q86SU0 546 aaPredicted RBP13.19□□□□□ -0.3
NUDCD1-203ENST00000519607 TEX13AQ9BXU3 409 aaPredicted RBP13.19□□□□□ -0.3
NUDCD1-203ENST00000519607 IMPACTQ9P2X3 320 aa13.19□□□□□ -0.3
NUDCD1-203ENST00000519607 A0A1B0GVL5 298 aa13.19□□□□□ -0.3
NUDCD1-203ENST00000519607 PPFIA3O75145 1194 aa13.19□□□□□ -0.3
NUDCD1-203ENST00000519607 POLR3DP05423 398 aaPredicted RBP13.19□□□□□ -0.3
NUDCD1-203ENST00000519607 PTPN14Q15678 1187 aa13.19□□□□□ -0.3
NUDCD1-203ENST00000519607 CEP135Q66GS9 1140 aa13.19□□□□□ -0.3
NUDCD1-203ENST00000519607 FILIP1Q7Z7B0 1213 aa13.19□□□□□ -0.3
NUDCD1-203ENST00000519607 AOPEPQ8N6M6 819 aa13.19□□□□□ -0.3
NUDCD1-203ENST00000519607 BPIFA3Q9BQP9 254 aa13.19□□□□□ -0.3
NUDCD1-203ENST00000519607 KIAA1468Q9P260 1216 aa13.19□□□□□ -0.3
NUDCD1-203ENST00000519607 KCPQ6ZWJ8 1503 aa13.19□□□□□ -0.3
NUDCD1-203ENST00000519607 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP13.18□□□□□ -0.3
NUDCD1-203ENST00000519607 KIF2AO00139 706 aaPredicted RBP13.18□□□□□ -0.3
NUDCD1-203ENST00000519607 CDKL5O76039 1030 aa13.18□□□□□ -0.3
NUDCD1-203ENST00000519607 PCCAP05165 728 aaPredicted RBP13.18□□□□□ -0.3
NUDCD1-203ENST00000519607 IL2RBP14784 551 aa13.18□□□□□ -0.3
NUDCD1-203ENST00000519607 TTF1Q15361 905 aaPredicted RBP13.18□□□□□ -0.3
NUDCD1-203ENST00000519607 MYSM1Q5VVJ2 828 aa13.18□□□□□ -0.3
NUDCD1-203ENST00000519607 CPLX2Q6PUV4 134 aaKnown RBP13.18□□□□□ -0.3
NUDCD1-203ENST00000519607 MB21D2Q8IYB1 491 aaPredicted RBP13.18□□□□□ -0.3
NUDCD1-203ENST00000519607 PLA2G12BQ9BX93 195 aa13.18□□□□□ -0.3
NUDCD1-203ENST00000519607 NWD2Q9ULI1 1742 aa13.18□□□□□ -0.3
NUDCD1-203ENST00000519607 CCDC69A6NI79 296 aa13.18□□□□□ -0.3
NUDCD1-203ENST00000519607 SLC3A2P08195 630 aaKnown RBP13.18□□□□□ -0.3
NUDCD1-203ENST00000519607 NDUFA8P51970 172 aa13.18□□□□□ -0.3
NUDCD1-203ENST00000519607 ZNF330Q9Y3S2 320 aaPredicted RBP13.18□□□□□ -0.3
NUDCD1-203ENST00000519607 PAPPAQ13219 1627 aa13.17□□□□□ -0.3
NUDCD1-203ENST00000519607 GPAA1O43292 621 aa13.17□□□□□ -0.3
NUDCD1-203ENST00000519607 ADORA1P30542 326 aa13.17□□□□□ -0.3
NUDCD1-203ENST00000519607 ZAP70P43403 619 aa13.17□□□□□ -0.3
NUDCD1-203ENST00000519607 JMYQ8N9B5 988 aa13.17□□□□□ -0.3
NUDCD1-203ENST00000519607 ZBTB38Q8NAP3 1195 aaPredicted RBP13.17□□□□□ -0.3
NUDCD1-203ENST00000519607 ZNF592Q92610 1267 aa13.17□□□□□ -0.3
NUDCD1-203ENST00000519607 PKNOX2Q96KN3 472 aa13.17□□□□□ -0.3
NUDCD1-203ENST00000519607 CLIC4Q9Y696 253 aa13.17□□□□□ -0.3
NUDCD1-203ENST00000519607 ATP2B3Q16720 1220 aa13.16□□□□□ -0.3
NUDCD1-203ENST00000519607 ANO1Q5XXA6 986 aa13.16□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms