RNA–Protein interactions for RNA: ENST00000519553.1

PTPN12-213, Transcript of protein tyrosine phosphatase, non-receptor type 12, humanhuman

TSL 3

Gene PTPN12, Length 395 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN12-213ENST00000519553 FAM8A1Q9UBU6 413 aa10.59□□□□□ -0.71
PTPN12-213ENST00000519553 LINC01387J3KSC0 135 aa10.58□□□□□ -0.72
PTPN12-213ENST00000519553 DEAF1O75398 565 aaPredicted RBP10.58□□□□□ -0.72
PTPN12-213ENST00000519553 EIF4BP23588 611 aaKnown RBP10.58□□□□□ -0.72
PTPN12-213ENST00000519553 TRAPPC3LQ5T215 181 aa10.58□□□□□ -0.72
PTPN12-213ENST00000519553 FAM229AH3BQW9 127 aa10.57□□□□□ -0.72
PTPN12-213ENST00000519553 USP17L7P0C7H9 530 aa10.57□□□□□ -0.72
PTPN12-213ENST00000519553 CDC25BP30305 580 aa10.57□□□□□ -0.72
PTPN12-213ENST00000519553 GSTT1P30711 240 aa10.57□□□□□ -0.72
PTPN12-213ENST00000519553 MRPL58Q14197 206 aaKnown RBP10.57□□□□□ -0.72
PTPN12-213ENST00000519553 SETDB1Q15047 1291 aa10.57□□□□□ -0.72
PTPN12-213ENST00000519553 DTWD1Q8N5C7 304 aa10.57□□□□□ -0.72
PTPN12-213ENST00000519553 CLEC4MQ9H2X3 399 aaPredicted RBP10.57□□□□□ -0.72
PTPN12-213ENST00000519553 NOP53Q9NZM5 478 aaKnown RBP10.57□□□□□ -0.72
PTPN12-213ENST00000519553 CTSHP09668 335 aa10.56□□□□□ -0.72
PTPN12-213ENST00000519553 ESRRAP11474 423 aaPredicted RBP10.56□□□□□ -0.72
PTPN12-213ENST00000519553 XRCC5P13010 732 aaKnown RBP10.56□□□□□ -0.72
PTPN12-213ENST00000519553 DTHD1Q6ZMT9 781 aa10.56□□□□□ -0.72
PTPN12-213ENST00000519553 FMR1NBQ8N0W7 255 aaPredicted RBP10.56□□□□□ -0.72
PTPN12-213ENST00000519553 UNCXA6NJT0 531 aa10.55□□□□□ -0.72
PTPN12-213ENST00000519553 FAM177BA6PVY3 158 aa10.55□□□□□ -0.72
PTPN12-213ENST00000519553 SORBS3O60504 671 aa10.55□□□□□ -0.72
PTPN12-213ENST00000519553 CABP4P57796 275 aa10.55□□□□□ -0.72
PTPN12-213ENST00000519553 PCDH1Q08174 1060 aa10.55□□□□□ -0.72
PTPN12-213ENST00000519553 FAAP100Q0VG06 881 aa10.55□□□□□ -0.72
PTPN12-213ENST00000519553 ZNF423Q2M1K9 1284 aa10.55□□□□□ -0.72
PTPN12-213ENST00000519553 HGSNATQ68CP4 663 aa10.55□□□□□ -0.72
PTPN12-213ENST00000519553 GALNT11Q8NCW6 608 aa10.55□□□□□ -0.72
PTPN12-213ENST00000519553 SRA1Q9HD15 236 aaKnown RBP10.55□□□□□ -0.72
PTPN12-213ENST00000519553 SPDYE3A6NKU9 549 aa10.54□□□□□ -0.72
PTPN12-213ENST00000519553 SOX1O00570 391 aaPredicted RBP10.54□□□□□ -0.72
PTPN12-213ENST00000519553 FSCN2O14926 492 aa10.54□□□□□ -0.72
PTPN12-213ENST00000519553 IKBKEQ14164 716 aa10.54□□□□□ -0.72
PTPN12-213ENST00000519553 ZNF428Q96B54 188 aa10.54□□□□□ -0.72
PTPN12-213ENST00000519553 CARD10Q9BWT7 1032 aa10.54□□□□□ -0.72
PTPN12-213ENST00000519553 PPP4R2Q9NY27 417 aa10.54□□□□□ -0.72
PTPN12-213ENST00000519553 B3GALT4O96024 378 aa10.53□□□□□ -0.72
PTPN12-213ENST00000519553 PIP4K2BP78356 416 aa10.53□□□□□ -0.72
PTPN12-213ENST00000519553 RPS26P11Q5JNZ5 115 aaPredicted RBP10.53□□□□□ -0.72
PTPN12-213ENST00000519553 FBXO11Q86XK2 927 aa10.53□□□□□ -0.72
PTPN12-213ENST00000519553 MAP4K3Q8IVH8 894 aa10.53□□□□□ -0.72
PTPN12-213ENST00000519553 WNT8BQ93098 351 aa10.53□□□□□ -0.72
PTPN12-213ENST00000519553 MRS2Q9HD23 443 aa10.53□□□□□ -0.72
PTPN12-213ENST00000519553 GSK3AP49840 483 aa10.52□□□□□ -0.73
PTPN12-213ENST00000519553 RAC1P63000 192 aa10.52□□□□□ -0.73
PTPN12-213ENST00000519553 ANKRD24Q8TF21 1146 aa10.52□□□□□ -0.73
PTPN12-213ENST00000519553 CRELD1Q96HD1 420 aa10.52□□□□□ -0.73
PTPN12-213ENST00000519553 VTI1BQ9UEU0 232 aa10.52□□□□□ -0.73
PTPN12-213ENST00000519553 PPM1HQ9ULR3 514 aa10.52□□□□□ -0.73
PTPN12-213ENST00000519553 AKAP2Q9Y2D5 859 aa10.52□□□□□ -0.73
PTPN12-213ENST00000519553 RNF225M0QZC1 329 aaPredicted RBP10.51□□□□□ -0.73
PTPN12-213ENST00000519553 DLL1O00548 723 aa10.51□□□□□ -0.73
PTPN12-213ENST00000519553 SPATA31C1P0DKV0 1188 aa10.51□□□□□ -0.73
PTPN12-213ENST00000519553 TRIM28Q13263 835 aaKnown RBP10.51□□□□□ -0.73
PTPN12-213ENST00000519553 FAM117BQ6P1L5 589 aa10.51□□□□□ -0.73
PTPN12-213ENST00000519553 SLC7A3Q8WY07 619 aa10.51□□□□□ -0.73
PTPN12-213ENST00000519553 SOX17Q9H6I2 414 aaPredicted RBP10.51□□□□□ -0.73
PTPN12-213ENST00000519553 OSGEPQ9NPF4 335 aa10.51□□□□□ -0.73
PTPN12-213ENST00000519553 SEC31BQ9NQW1 1179 aa10.51□□□□□ -0.73
PTPN12-213ENST00000519553 ELNP15502 786 aa10.5□□□□□ -0.73
PTPN12-213ENST00000519553 FOXD4L6Q3SYB3 417 aaPredicted RBP10.5□□□□□ -0.73
PTPN12-213ENST00000519553 PRRT3Q5FWE3 981 aa10.5□□□□□ -0.73
PTPN12-213ENST00000519553 MEI1Q5TIA1 1274 aa10.5□□□□□ -0.73
PTPN12-213ENST00000519553 FOXD4L3Q6VB84 417 aaPredicted RBP10.5□□□□□ -0.73
PTPN12-213ENST00000519553 KLHL23Q8NBE8 558 aa10.5□□□□□ -0.73
PTPN12-213ENST00000519553 KLHDC7BQ96G42 594 aa10.5□□□□□ -0.73
PTPN12-213ENST00000519553 ZFYVE1Q9HBF4 777 aa10.5□□□□□ -0.73
PTPN12-213ENST00000519553 KIAA1522Q9P206 1035 aaPredicted RBP10.5□□□□□ -0.73
PTPN12-213ENST00000519553 ADAM11O75078 769 aa10.49□□□□□ -0.73
PTPN12-213ENST00000519553 FBXO24O75426 580 aa10.49□□□□□ -0.73
PTPN12-213ENST00000519553 C19orf57Q0VDD7 668 aa10.49□□□□□ -0.73
PTPN12-213ENST00000519553 LDLRAD1Q5T700 205 aa10.49□□□□□ -0.73
PTPN12-213ENST00000519553 NRSN2Q9GZP1 204 aa10.49□□□□□ -0.73
PTPN12-213ENST00000519553 KCNK4Q9NYG8 393 aa10.49□□□□□ -0.73
PTPN12-213ENST00000519553 VAMP1P23763 118 aa10.48□□□□□ -0.73
PTPN12-213ENST00000519553 MRRFQ96E11 262 aaKnown RBP10.48□□□□□ -0.73
PTPN12-213ENST00000519553 RECKO95980 971 aa10.47□□□□□ -0.73
PTPN12-213ENST00000519553 KCNMA1Q12791 1236 aa10.47□□□□□ -0.73
PTPN12-213ENST00000519553 GRIK4Q16099 956 aa10.47□□□□□ -0.73
PTPN12-213ENST00000519553 TPTE2Q6XPS3 522 aa10.47□□□□□ -0.73
PTPN12-213ENST00000519553 ALYREFQ86V81 257 aaKnown RBP10.47□□□□□ -0.73
PTPN12-213ENST00000519553 TRIM56Q9BRZ2 755 aaKnown RBP10.47□□□□□ -0.73
PTPN12-213ENST00000519553 ENC1O14682 589 aa10.46□□□□□ -0.73
PTPN12-213ENST00000519553 DDX3YO15523 660 aaKnown RBP10.46□□□□□ -0.73
PTPN12-213ENST00000519553 SELPP16109 830 aa10.46□□□□□ -0.73
PTPN12-213ENST00000519553 CD68P34810 354 aaPredicted RBP10.46□□□□□ -0.73
PTPN12-213ENST00000519553 ITGAEP38570 1179 aa10.46□□□□□ -0.73
PTPN12-213ENST00000519553 ZNF157P51786 506 aaPredicted RBP10.46□□□□□ -0.73
PTPN12-213ENST00000519553 SUZ12Q15022 739 aaKnown RBP10.46□□□□□ -0.73
PTPN12-213ENST00000519553 SHISA2Q6UWI4 295 aa10.46□□□□□ -0.73
PTPN12-213ENST00000519553 NECAB3Q96P71 396 aaPredicted RBP10.46□□□□□ -0.73
PTPN12-213ENST00000519553 GPN3Q9UHW5 284 aaPredicted RBP10.46□□□□□ -0.73
PTPN12-213ENST00000519553 TTF2Q9UNY4 1162 aaKnown RBP10.46□□□□□ -0.73
PTPN12-213ENST00000519553 USP31Q70CQ4 1352 aa10.45□□□□□ -0.74
PTPN12-213ENST00000519553 ARL4DP49703 201 aa10.45□□□□□ -0.74
PTPN12-213ENST00000519553 GSTM4Q03013 218 aa10.45□□□□□ -0.74
PTPN12-213ENST00000519553 DCAF5Q96JK2 942 aa10.45□□□□□ -0.74
PTPN12-213ENST00000519553 KRBA1A5PL33 1030 aa10.44□□□□□ -0.74
PTPN12-213ENST00000519553 WISP1O95388 367 aa10.44□□□□□ -0.74
PTPN12-213ENST00000519553 CELA3AP09093 270 aa10.44□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms