RNA–Protein interactions for RNA: ENST00000519254.2

CLN8-204, Transcript of CLN8, transmembrane ER and ERGIC protein, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CLN8, Length 1,769 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN8-204ENST00000519254 PODXL2Q9NZ53 605 aa17.43■□□□□ 0.38
CLN8-204ENST00000519254 LTBP1Q14766 1721 aa17.42■□□□□ 0.38
CLN8-204ENST00000519254 KIAA1551Q9HCM1 1747 aa17.42■□□□□ 0.38
CLN8-204ENST00000519254 RFX7Q2KHR2 1363 aa17.42■□□□□ 0.38
CLN8-204ENST00000519254 DDIT3P35638 169 aa17.42■□□□□ 0.38
CLN8-204ENST00000519254 ZNF512BQ96KM6 892 aaPredicted RBP17.42■□□□□ 0.38
CLN8-204ENST00000519254 GNL3LQ9NVN8 582 aaKnown RBP17.42■□□□□ 0.38
CLN8-204ENST00000519254 AKAP11Q9UKA4 1901 aa17.42■□□□□ 0.38
CLN8-204ENST00000519254 C21orf2O43822 256 aa17.41■□□□□ 0.38
CLN8-204ENST00000519254 FRAT2O75474 233 aaPredicted RBP17.41■□□□□ 0.38
CLN8-204ENST00000519254 HIBADHP31937 336 aaKnown RBP17.41■□□□□ 0.38
CLN8-204ENST00000519254 SPATA5Q8NB90 893 aa17.41■□□□□ 0.38
CLN8-204ENST00000519254 HMG20BQ9P0W2 317 aa17.41■□□□□ 0.38
CLN8-204ENST00000519254 CD2APQ9Y5K6 639 aa17.41■□□□□ 0.38
CLN8-204ENST00000519254 ST18O60284 1047 aa17.4■□□□□ 0.38
CLN8-204ENST00000519254 NFKBIBQ15653 356 aa17.4■□□□□ 0.38
CLN8-204ENST00000519254 PIM2Q9P1W9 311 aa17.4■□□□□ 0.38
CLN8-204ENST00000519254 IRS2Q9Y4H2 1338 aa17.4■□□□□ 0.38
CLN8-204ENST00000519254 MED23Q9ULK4 1368 aa17.4■□□□□ 0.38
CLN8-204ENST00000519254 DUOX1Q9NRD9 1551 aa17.4■□□□□ 0.38
CLN8-204ENST00000519254 CCDC171Q6TFL3 1326 aa17.4■□□□□ 0.38
CLN8-204ENST00000519254 RIMBP2O15034 1052 aa17.4■□□□□ 0.38
CLN8-204ENST00000519254 NEK4P51957 841 aa17.4■□□□□ 0.38
CLN8-204ENST00000519254 FBXO33Q7Z6M2 555 aa17.4■□□□□ 0.38
CLN8-204ENST00000519254 KBTBD3Q8NAB2 608 aa17.4■□□□□ 0.38
CLN8-204ENST00000519254 SNX14Q9Y5W7 946 aa17.4■□□□□ 0.38
CLN8-204ENST00000519254 ZNF804AQ7Z570 1209 aa17.39■□□□□ 0.37
CLN8-204ENST00000519254 RASEFQ8IZ41 740 aa17.39■□□□□ 0.37
CLN8-204ENST00000519254 C7orf43Q8WVR3 580 aa17.39■□□□□ 0.37
CLN8-204ENST00000519254 MYH7P12883 1935 aa17.38■□□□□ 0.37
CLN8-204ENST00000519254 CHGBP05060 677 aa17.38■□□□□ 0.37
CLN8-204ENST00000519254 CYP2E1P05181 493 aaPredicted RBP17.38■□□□□ 0.37
CLN8-204ENST00000519254 MAP4K1Q92918 833 aa17.38■□□□□ 0.37
CLN8-204ENST00000519254 KCNB2Q92953 911 aa17.38■□□□□ 0.37
CLN8-204ENST00000519254 COL1A1P02452 1464 aaPredicted RBP17.38■□□□□ 0.37
CLN8-204ENST00000519254 CHAF1AQ13111 956 aaPredicted RBP17.38■□□□□ 0.37
CLN8-204ENST00000519254 ZNF589Q86UQ0 364 aaPredicted RBP17.38■□□□□ 0.37
CLN8-204ENST00000519254 TICAM2Q86XR7 235 aa17.38■□□□□ 0.37
CLN8-204ENST00000519254 NLGN2Q8NFZ4 835 aa17.38■□□□□ 0.37
CLN8-204ENST00000519254 PIH1D3Q9NQM4 214 aaKnown RBP17.38■□□□□ 0.37
CLN8-204ENST00000519254 CHMP5Q9NZZ3 219 aa17.38■□□□□ 0.37
CLN8-204ENST00000519254 JAG2Q9Y219 1238 aa17.38■□□□□ 0.37
CLN8-204ENST00000519254 MYH13Q9UKX3 1938 aa17.37■□□□□ 0.37
CLN8-204ENST00000519254 NECTIN1Q15223 517 aa17.37■□□□□ 0.37
CLN8-204ENST00000519254 DALRD3Q5D0E6 543 aaKnown RBP17.37■□□□□ 0.37
CLN8-204ENST00000519254 C15orf52Q6ZUT6 534 aaKnown RBP17.37■□□□□ 0.37
CLN8-204ENST00000519254 ZC3H12CQ9C0D7 883 aaKnown RBP17.37■□□□□ 0.37
CLN8-204ENST00000519254 DENND2AQ9ULE3 1009 aa17.37■□□□□ 0.37
CLN8-204ENST00000519254 MYO5AQ9Y4I1 1855 aaKnown RBP17.36■□□□□ 0.37
CLN8-204ENST00000519254 TTF1Q15361 905 aaPredicted RBP17.36■□□□□ 0.37
CLN8-204ENST00000519254 WASHC4Q2M389 1173 aa17.36■□□□□ 0.37
CLN8-204ENST00000519254 CCDC93Q567U6 631 aa17.36■□□□□ 0.37
CLN8-204ENST00000519254 CC2D2BQ6DHV5 1058 aa17.36■□□□□ 0.37
CLN8-204ENST00000519254 EYA3Q99504 573 aa17.36■□□□□ 0.37
CLN8-204ENST00000519254 FOXD4L1Q9NU39 408 aa17.36■□□□□ 0.37
CLN8-204ENST00000519254 IDH1O75874 414 aaKnown RBP17.35■□□□□ 0.37
CLN8-204ENST00000519254 SLFNL1Q499Z3 407 aa17.35■□□□□ 0.37
CLN8-204ENST00000519254 UPF3BQ9BZI7 483 aaKnown RBP17.35■□□□□ 0.37
CLN8-204ENST00000519254 RBM8AQ9Y5S9 174 aaKnown RBP17.35■□□□□ 0.37
CLN8-204ENST00000519254 BRCA1P38398 1863 aaKnown RBP17.35■□□□□ 0.37
CLN8-204ENST00000519254 SEMA3EO15041 775 aa17.35■□□□□ 0.37
CLN8-204ENST00000519254 HSP90AA1P07900 732 aaKnown RBP17.35■□□□□ 0.37
CLN8-204ENST00000519254 SEC62Q99442 399 aaKnown RBP17.35■□□□□ 0.37
CLN8-204ENST00000519254 FHDC1Q9C0D6 1143 aaPredicted RBP17.35■□□□□ 0.37
CLN8-204ENST00000519254 CD209Q9NNX6 404 aa17.35■□□□□ 0.37
CLN8-204ENST00000519254 ABCF2Q9UG63 623 aa17.35■□□□□ 0.37
CLN8-204ENST00000519254 BCS1LQ9Y276 419 aa17.35■□□□□ 0.37
CLN8-204ENST00000519254 G3V3G9 751 aa17.34■□□□□ 0.37
CLN8-204ENST00000519254 DOK7Q18PE1 504 aa17.34■□□□□ 0.37
CLN8-204ENST00000519254 MCMDC2Q4G0Z9 681 aa17.34■□□□□ 0.37
CLN8-204ENST00000519254 DCAF8Q5TAQ9 597 aa17.34■□□□□ 0.37
CLN8-204ENST00000519254 CIZ1Q9ULV3 898 aaPredicted RBP17.34■□□□□ 0.37
CLN8-204ENST00000519254 SNED1Q8TER0 1413 aa17.33■□□□□ 0.37
CLN8-204ENST00000519254 MCM2P49736 904 aa17.33■□□□□ 0.37
CLN8-204ENST00000519254 CREB3L3Q68CJ9 461 aa17.33■□□□□ 0.37
CLN8-204ENST00000519254 RTKN2Q8IZC4 609 aa17.33■□□□□ 0.37
CLN8-204ENST00000519254 IL27Q8NEV9 243 aa17.33■□□□□ 0.37
CLN8-204ENST00000519254 TDRD7Q8NHU6 1098 aaKnown RBP17.33■□□□□ 0.37
CLN8-204ENST00000519254 DDX24Q9GZR7 859 aaKnown RBP eCLIP17.33■□□□□ 0.37
CLN8-204ENST00000519254 LRP2BPQ9P2M1 347 aa17.33■□□□□ 0.37
CLN8-204ENST00000519254 RNF113AO15541 343 aaKnown RBP17.33■□□□□ 0.36
CLN8-204ENST00000519254 ZMYM1Q5SVZ6 1142 aa17.33■□□□□ 0.36
CLN8-204ENST00000519254 CCDC129Q6ZRS4 1044 aa17.33■□□□□ 0.36
CLN8-204ENST00000519254 RTFDC1Q9BY42 306 aaPredicted RBP17.33■□□□□ 0.36
CLN8-204ENST00000519254 HELLSQ9NRZ9 838 aa17.33■□□□□ 0.36
CLN8-204ENST00000519254 AOC3Q16853 763 aa17.32■□□□□ 0.36
CLN8-204ENST00000519254 LRRFIP1Q32MZ4 808 aaKnown RBP17.32■□□□□ 0.36
CLN8-204ENST00000519254 SLC9C2Q5TAH2 1124 aa17.32■□□□□ 0.36
CLN8-204ENST00000519254 SOGA3Q5TF21 947 aa17.32■□□□□ 0.36
CLN8-204ENST00000519254 SUPT20HQ8NEM7 779 aa17.32■□□□□ 0.36
CLN8-204ENST00000519254 FBXW7Q969H0 707 aa17.32■□□□□ 0.36
CLN8-204ENST00000519254 TMX3Q96JJ7 454 aa17.32■□□□□ 0.36
CLN8-204ENST00000519254 TTC14Q96N46 770 aa17.32■□□□□ 0.36
CLN8-204ENST00000519254 COA1Q9GZY4 146 aa17.32■□□□□ 0.36
CLN8-204ENST00000519254 DBNDD1Q9H9R9 158 aa17.32■□□□□ 0.36
CLN8-204ENST00000519254 DOCK2Q92608 1830 aa17.31■□□□□ 0.36
CLN8-204ENST00000519254 SLC27A2O14975 620 aa17.31■□□□□ 0.36
CLN8-204ENST00000519254 IL1R1P14778 569 aa17.31■□□□□ 0.36
CLN8-204ENST00000519254 MAP3K12Q12852 859 aa17.31■□□□□ 0.36
CLN8-204ENST00000519254 ADCK5Q3MIX3 580 aa17.31■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 47.1 ms