RNA–Protein interactions for RNA: ENST00000519113.5

CTNNA1-213, Transcript of catenin alpha 1, humanhuman

TSL 3

Gene CTNNA1, Length 859 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-213ENST00000519113 OTOP1Q7RTM1 612 aa24.22■■□□□ 1.47
CTNNA1-213ENST00000519113 TSR2Q969E8 191 aaKnown RBP24.22■■□□□ 1.47
CTNNA1-213ENST00000519113 ZBTB4Q9P1Z0 1013 aaPredicted RBP24.22■■□□□ 1.47
CTNNA1-213ENST00000519113 MKI67P46013 3256 aaKnown RBP24.21■■□□□ 1.47
CTNNA1-213ENST00000519113 ANKRD18BA2A2Z9 1011 aa24.21■■□□□ 1.47
CTNNA1-213ENST00000519113 TWISTNBQ3B726 338 aaPredicted RBP24.21■■□□□ 1.47
CTNNA1-213ENST00000519113 C15orf52Q6ZUT6 534 aaKnown RBP24.21■■□□□ 1.47
CTNNA1-213ENST00000519113 G2E3Q7L622 706 aa24.21■■□□□ 1.47
CTNNA1-213ENST00000519113 CLMNQ96JQ2 1002 aa24.21■■□□□ 1.47
CTNNA1-213ENST00000519113 SPEF2Q9C093 1822 aa24.21■■□□□ 1.47
CTNNA1-213ENST00000519113 ANP32CO43423 234 aa24.2■■□□□ 1.46
CTNNA1-213ENST00000519113 IREB2P48200 963 aaKnown RBP24.2■■□□□ 1.46
CTNNA1-213ENST00000519113 CASP7P55210 303 aa24.2■■□□□ 1.46
CTNNA1-213ENST00000519113 CERS5Q8N5B7 392 aa24.2■■□□□ 1.46
CTNNA1-213ENST00000519113 ERO1AQ96HE7 468 aa24.2■■□□□ 1.46
CTNNA1-213ENST00000519113 IGF2BP3O00425 579 aaKnown RBP eCLIP24.19■■□□□ 1.46
CTNNA1-213ENST00000519113 ZNF804AQ7Z570 1209 aa24.19■■□□□ 1.46
CTNNA1-213ENST00000519113 SPDYE2BA6NHP3 402 aa24.18■■□□□ 1.46
CTNNA1-213ENST00000519113 SPDYE6P0CI01 402 aa24.18■■□□□ 1.46
CTNNA1-213ENST00000519113 FKBP1AP62942 108 aaKnown RBP24.18■■□□□ 1.46
CTNNA1-213ENST00000519113 FLIIQ13045 1269 aa24.18■■□□□ 1.46
CTNNA1-213ENST00000519113 CFAP100Q494V2 611 aa24.18■■□□□ 1.46
CTNNA1-213ENST00000519113 LINS1Q8NG48 757 aa24.18■■□□□ 1.46
CTNNA1-213ENST00000519113 CENPFP49454 3210 aa24.18■■□□□ 1.46
CTNNA1-213ENST00000519113 CLRN2A0PK11 232 aa24.17■■□□□ 1.46
CTNNA1-213ENST00000519113 F8W031 263 aaPredicted RBP24.17■■□□□ 1.46
CTNNA1-213ENST00000519113 TAF5LO75529 589 aa24.17■■□□□ 1.46
CTNNA1-213ENST00000519113 IL1R1P14778 569 aa24.17■■□□□ 1.46
CTNNA1-213ENST00000519113 DNAAF4Q8WXU2 420 aa24.17■■□□□ 1.46
CTNNA1-213ENST00000519113 VEZTQ9HBM0 779 aa24.17■■□□□ 1.46
CTNNA1-213ENST00000519113 IRS2Q9Y4H2 1338 aa24.16■■□□□ 1.46
CTNNA1-213ENST00000519113 SNAP23O00161 211 aa24.16■■□□□ 1.46
CTNNA1-213ENST00000519113 IFIT5Q13325 482 aaKnown RBP24.16■■□□□ 1.46
CTNNA1-213ENST00000519113 FKBP5Q13451 457 aaPredicted RBP24.16■■□□□ 1.46
CTNNA1-213ENST00000519113 NBPF12Q5TAG4 269 aaPredicted RBP24.16■■□□□ 1.46
CTNNA1-213ENST00000519113 ANKRD13AQ8IZ07 590 aa24.16■■□□□ 1.46
CTNNA1-213ENST00000519113 HELBQ8NG08 1087 aaPredicted RBP24.16■■□□□ 1.46
CTNNA1-213ENST00000519113 PRMT6Q96LA8 375 aaPredicted RBP24.16■■□□□ 1.46
CTNNA1-213ENST00000519113 PTPN22Q9Y2R2 807 aa24.16■■□□□ 1.46
CTNNA1-213ENST00000519113 PCDHAC2Q9Y5I4 1007 aa24.16■■□□□ 1.46
CTNNA1-213ENST00000519113 SSC5DA1L4H1 1573 aa24.16■■□□□ 1.46
CTNNA1-213ENST00000519113 POTEFA5A3E0 1075 aa24.15■■□□□ 1.46
CTNNA1-213ENST00000519113 RBM5P52756 815 aaKnown RBP eCLIP24.15■■□□□ 1.46
CTNNA1-213ENST00000519113 CRHR2Q13324 411 aa24.15■■□□□ 1.46
CTNNA1-213ENST00000519113 CCDC27Q2M243 656 aa24.15■■□□□ 1.46
CTNNA1-213ENST00000519113 EFCC1Q9HA90 598 aa24.15■■□□□ 1.46
CTNNA1-213ENST00000519113 USP2O75604 605 aaPredicted RBP24.14■■□□□ 1.45
CTNNA1-213ENST00000519113 CD99L2Q8TCZ2 262 aa24.14■■□□□ 1.45
CTNNA1-213ENST00000519113 SP3Q02447 781 aa24.13■■□□□ 1.45
CTNNA1-213ENST00000519113 TNFAIP1Q13829 316 aa24.13■■□□□ 1.45
CTNNA1-213ENST00000519113 RASA3Q14644 834 aa24.13■■□□□ 1.45
CTNNA1-213ENST00000519113 HABP4Q5JVS0 413 aaKnown RBP24.13■■□□□ 1.45
CTNNA1-213ENST00000519113 ARMC5Q96C12 935 aa24.13■■□□□ 1.45
CTNNA1-213ENST00000519113 CHMP3Q9Y3E7 222 aa24.13■■□□□ 1.45
CTNNA1-213ENST00000519113 TESPA1A2RU30 521 aaPredicted RBP24.12■■□□□ 1.45
CTNNA1-213ENST00000519113 GJA5P36382 358 aa24.12■■□□□ 1.45
CTNNA1-213ENST00000519113 WWC1Q8IX03 1113 aa24.12■■□□□ 1.45
CTNNA1-213ENST00000519113 FOXO4P98177 505 aa24.11■■□□□ 1.45
CTNNA1-213ENST00000519113 IL16Q14005 1332 aa24.1■■□□□ 1.45
CTNNA1-213ENST00000519113 ARHGEF6Q15052 776 aa24.1■■□□□ 1.45
CTNNA1-213ENST00000519113 PTPN18Q99952 460 aa24.1■■□□□ 1.45
CTNNA1-213ENST00000519113 TAF7LQ5H9L4 462 aa24.09■■□□□ 1.45
CTNNA1-213ENST00000519113 JAG2Q9Y219 1238 aa24.09■■□□□ 1.45
CTNNA1-213ENST00000519113 AOX1Q06278 1338 aa24.09■■□□□ 1.45
CTNNA1-213ENST00000519113 PLIN1O60240 522 aa24.08■■□□□ 1.45
CTNNA1-213ENST00000519113 CCDC57Q2TAC2 916 aa24.08■■□□□ 1.45
CTNNA1-213ENST00000519113 LDHAL6AQ6ZMR3 332 aa24.08■■□□□ 1.45
CTNNA1-213ENST00000519113 OPTNQ96CV9 577 aa24.08■■□□□ 1.45
CTNNA1-213ENST00000519113 TMEM106CQ9BVX2 250 aa24.08■■□□□ 1.45
CTNNA1-213ENST00000519113 ELP3Q9H9T3 547 aa24.08■■□□□ 1.45
CTNNA1-213ENST00000519113 ZNF70Q9UC06 446 aaPredicted RBP24.08■■□□□ 1.45
CTNNA1-213ENST00000519113 SERPINA10Q9UK55 444 aa24.08■■□□□ 1.45
CTNNA1-213ENST00000519113 FAM205AQ6ZU69 1335 aa24.08■■□□□ 1.44
CTNNA1-213ENST00000519113 BRCA2P51587 3418 aa24.07■■□□□ 1.44
CTNNA1-213ENST00000519113 EN2P19622 333 aaPredicted RBP24.07■■□□□ 1.44
CTNNA1-213ENST00000519113 SPDYE2Q495Y8 402 aa24.07■■□□□ 1.44
CTNNA1-213ENST00000519113 LMBR1LQ6UX01 489 aa24.07■■□□□ 1.44
CTNNA1-213ENST00000519113 CNNM1Q9NRU3 951 aa24.07■■□□□ 1.44
CTNNA1-213ENST00000519113 MFSD14BQ5SR56 506 aa24.06■■□□□ 1.44
CTNNA1-213ENST00000519113 NBPF11Q86T75 865 aa24.06■■□□□ 1.44
CTNNA1-213ENST00000519113 MS4A4AQ96JQ5 239 aa24.06■■□□□ 1.44
CTNNA1-213ENST00000519113 TTF2Q9UNY4 1162 aaKnown RBP24.06■■□□□ 1.44
CTNNA1-213ENST00000519113 NCBP3Q53F19 620 aaKnown RBP24.05■■□□□ 1.44
CTNNA1-213ENST00000519113 ZFYVE28Q9HCC9 887 aa24.05■■□□□ 1.44
CTNNA1-213ENST00000519113 ECM29Q5VYK3 1845 aa24.05■■□□□ 1.44
CTNNA1-213ENST00000519113 KIAA0100Q14667 2235 aaKnown RBP24.04■■□□□ 1.44
CTNNA1-213ENST00000519113 LAMB1P07942 1786 aa24.04■■□□□ 1.44
CTNNA1-213ENST00000519113 GTF2A2P52657 109 aa24.04■■□□□ 1.44
CTNNA1-213ENST00000519113 UBE4AQ14139 1066 aa24.04■■□□□ 1.44
CTNNA1-213ENST00000519113 BEND3Q5T5X7 828 aa24.04■■□□□ 1.44
CTNNA1-213ENST00000519113 TDRD7Q8NHU6 1098 aaKnown RBP24.04■■□□□ 1.44
CTNNA1-213ENST00000519113 ZNF594Q96JF6 807 aaPredicted RBP24.04■■□□□ 1.44
CTNNA1-213ENST00000519113 TDRD3Q9H7E2 651 aaKnown RBP24.04■■□□□ 1.44
CTNNA1-213ENST00000519113 CCER2I3L3R5 266 aa24.03■■□□□ 1.44
CTNNA1-213ENST00000519113 VAMP4O75379 141 aa24.03■■□□□ 1.44
CTNNA1-213ENST00000519113 HIBADHP31937 336 aaKnown RBP24.03■■□□□ 1.44
CTNNA1-213ENST00000519113 TNNI2P48788 182 aa24.03■■□□□ 1.44
CTNNA1-213ENST00000519113 MAP3K9P80192 1104 aa24.03■■□□□ 1.44
CTNNA1-213ENST00000519113 TAF1CQ15572 869 aaPredicted RBP24.03■■□□□ 1.44
CTNNA1-213ENST00000519113 PPP1R3FQ6ZSY5 799 aaPredicted RBP24.03■■□□□ 1.44
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms