RNA–Protein interactions for RNA: ENST00000518711.1

SPIDR-208, Transcript of scaffold protein involved in DNA repair, human

TSL 3

Gene SPIDR, Length 621 nt, Biotype retained intron, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SPIDR-208	ENST00000518711	ZBTB48	P10074	688 aa	Predicted RBP	7.36	□□□□□ -1.23
SPIDR-208	ENST00000518711	EIF2S2	P20042	333 aa	Known RBP	7.36	□□□□□ -1.23
SPIDR-208	ENST00000518711	PROSER3	Q2NL68	480 aa		7.36	□□□□□ -1.23
SPIDR-208	ENST00000518711	USP17L1	Q7RTZ2	530 aa		7.36	□□□□□ -1.23
SPIDR-208	ENST00000518711	ARMC9	Q7Z3E5	817 aa		7.36	□□□□□ -1.23
SPIDR-208	ENST00000518711	OGFOD1	Q8N543	542 aa		7.36	□□□□□ -1.23
SPIDR-208	ENST00000518711	ZBTB38	Q8NAP3	1195 aa	Predicted RBP	7.36	□□□□□ -1.23
SPIDR-208	ENST00000518711	USP38	Q8NB14	1042 aa		7.36	□□□□□ -1.23
SPIDR-208	ENST00000518711	IL27	Q8NEV9	243 aa		7.36	□□□□□ -1.23
SPIDR-208	ENST00000518711	PCGF6	Q9BYE7	350 aa		7.36	□□□□□ -1.23
SPIDR-208	ENST00000518711	RTN4	Q9NQC3	1192 aa	Known RBP	7.36	□□□□□ -1.23
SPIDR-208	ENST00000518711	HYPK	Q9NX55	129 aa		7.36	□□□□□ -1.23
SPIDR-208	ENST00000518711	DBF4	Q9UBU7	674 aa	Predicted RBP	7.36	□□□□□ -1.23
SPIDR-208	ENST00000518711	GGA1	Q9UJY5	639 aa		7.36	□□□□□ -1.23
SPIDR-208	ENST00000518711	DDX60	Q8IY21	1712 aa	Known RBP	7.35	□□□□□ -1.23
SPIDR-208	ENST00000518711		G3V3G9	751 aa		7.35	□□□□□ -1.23
SPIDR-208	ENST00000518711	RIMBP2	O15034	1052 aa		7.35	□□□□□ -1.23
SPIDR-208	ENST00000518711	GPR37L1	O60883	481 aa		7.35	□□□□□ -1.23
SPIDR-208	ENST00000518711	ATP2B4	P23634	1241 aa		7.35	□□□□□ -1.23
SPIDR-208	ENST00000518711	DOK7	Q18PE1	504 aa		7.35	□□□□□ -1.23
SPIDR-208	ENST00000518711	DCAF8	Q5TAQ9	597 aa		7.35	□□□□□ -1.23
SPIDR-208	ENST00000518711	STRIP1	Q5VSL9	837 aa		7.35	□□□□□ -1.23
SPIDR-208	ENST00000518711	SPRYD7	Q5W111	196 aa		7.35	□□□□□ -1.23
SPIDR-208	ENST00000518711	MOB2	Q70IA6	237 aa		7.35	□□□□□ -1.23
SPIDR-208	ENST00000518711	IFNL1	Q8IU54	200 aa		7.35	□□□□□ -1.23
SPIDR-208	ENST00000518711	FAM89A	Q96GI7	184 aa		7.35	□□□□□ -1.23
SPIDR-208	ENST00000518711	THUMPD2	Q9BTF0	503 aa	Known RBP	7.35	□□□□□ -1.23
SPIDR-208	ENST00000518711	ANKIB1	Q9P2G1	1089 aa		7.35	□□□□□ -1.23
SPIDR-208	ENST00000518711	SCN9A	Q15858	1988 aa		7.35	□□□□□ -1.23
SPIDR-208	ENST00000518711	XDH	P47989	1333 aa		7.34	□□□□□ -1.23
SPIDR-208	ENST00000518711	MAPK8IP3	Q9UPT6	1336 aa		7.34	□□□□□ -1.23
SPIDR-208	ENST00000518711	LAMB2	P55268	1798 aa		7.34	□□□□□ -1.23
SPIDR-208	ENST00000518711	IRS4	O14654	1257 aa	Predicted RBP	7.34	□□□□□ -1.23
SPIDR-208	ENST00000518711	MRPS5	P82675	430 aa	Known RBP	7.34	□□□□□ -1.23
SPIDR-208	ENST00000518711	CCDC152	Q4G0S7	254 aa		7.34	□□□□□ -1.23
SPIDR-208	ENST00000518711	OTUD7B	Q6GQQ9	843 aa		7.34	□□□□□ -1.23
SPIDR-208	ENST00000518711	APOBEC3F	Q8IUX4	373 aa	Known RBP	7.34	□□□□□ -1.23
SPIDR-208	ENST00000518711	C7orf61	Q8IZ16	206 aa		7.34	□□□□□ -1.23
SPIDR-208	ENST00000518711	CCDC191	Q8NCU4	936 aa		7.34	□□□□□ -1.23
SPIDR-208	ENST00000518711	PPP2R3B	Q9Y5P8	575 aa		7.34	□□□□□ -1.23
SPIDR-208	ENST00000518711	UNC79	Q9P2D8	2635 aa		7.34	□□□□□ -1.23
SPIDR-208	ENST00000518711	DLG5	Q8TDM6	1919 aa		7.34	□□□□□ -1.23
SPIDR-208	ENST00000518711	ASTN2	O75129	1339 aa	Predicted RBP	7.33	□□□□□ -1.24
SPIDR-208	ENST00000518711	COL1A1	P02452	1464 aa	Predicted RBP	7.33	□□□□□ -1.24
SPIDR-208	ENST00000518711	TESPA1	A2RU30	521 aa	Predicted RBP	7.33	□□□□□ -1.24
SPIDR-208	ENST00000518711	WNT10B	O00744	389 aa		7.33	□□□□□ -1.24
SPIDR-208	ENST00000518711	UFL1	O94874	794 aa		7.33	□□□□□ -1.24
SPIDR-208	ENST00000518711	PCCA	P05165	728 aa	Predicted RBP	7.33	□□□□□ -1.24
SPIDR-208	ENST00000518711	SYN1	P17600	705 aa		7.33	□□□□□ -1.24
SPIDR-208	ENST00000518711	CAPN2	P17655	700 aa		7.33	□□□□□ -1.24
SPIDR-208	ENST00000518711	RIPK4	P57078	832 aa		7.33	□□□□□ -1.24
SPIDR-208	ENST00000518711	PTPN12	Q05209	780 aa	Known RBP	7.33	□□□□□ -1.24
SPIDR-208	ENST00000518711	AIMP1	Q12904	312 aa	Known RBP	7.33	□□□□□ -1.24
SPIDR-208	ENST00000518711	CRHR2	Q13324	411 aa		7.33	□□□□□ -1.24
SPIDR-208	ENST00000518711	COL9A2	Q14055	689 aa	Predicted RBP	7.33	□□□□□ -1.24
SPIDR-208	ENST00000518711	MTMR14	Q8NCE2	650 aa		7.33	□□□□□ -1.24
SPIDR-208	ENST00000518711	ZBED3	Q96IU2	234 aa	Predicted RBP	7.33	□□□□□ -1.24
SPIDR-208	ENST00000518711	NECAB3	Q96P71	396 aa	Predicted RBP	7.33	□□□□□ -1.24
SPIDR-208	ENST00000518711	COA1	Q9GZY4	146 aa		7.33	□□□□□ -1.24
SPIDR-208	ENST00000518711	BSDC1	Q9NW68	430 aa	Predicted RBP	7.33	□□□□□ -1.24
SPIDR-208	ENST00000518711	PSME4	Q14997	1843 aa		7.33	□□□□□ -1.24
SPIDR-208	ENST00000518711	SMIM22	K7EJ46	135 aa		7.32	□□□□□ -1.24
SPIDR-208	ENST00000518711	PPP1R12B	O60237	982 aa	Predicted RBP	7.32	□□□□□ -1.24
SPIDR-208	ENST00000518711	PDE8A	O60658	829 aa		7.32	□□□□□ -1.24
SPIDR-208	ENST00000518711	NBPF9	Q3BBW0	867 aa		7.32	□□□□□ -1.24
SPIDR-208	ENST00000518711	SUPT20HL1	Q3ZLR7	823 aa		7.32	□□□□□ -1.24
SPIDR-208	ENST00000518711	DACT2	Q5SW24	774 aa		7.32	□□□□□ -1.24
SPIDR-208	ENST00000518711	CCER1	Q8TC90	406 aa	Predicted RBP	7.32	□□□□□ -1.24
SPIDR-208	ENST00000518711	U2AF1L4	Q8WU68	220 aa	Known RBP	7.32	□□□□□ -1.24
SPIDR-208	ENST00000518711	SLC10A4	Q96EP9	437 aa		7.32	□□□□□ -1.24
SPIDR-208	ENST00000518711	CDC5L	Q99459	802 aa	Known RBP	7.32	□□□□□ -1.24
SPIDR-208	ENST00000518711	RNF208	Q9H0X6	261 aa		7.32	□□□□□ -1.24
SPIDR-208	ENST00000518711	C11orf16	Q9NQ32	467 aa		7.32	□□□□□ -1.24
SPIDR-208	ENST00000518711	THEG	Q9P2T0	379 aa		7.32	□□□□□ -1.24
SPIDR-208	ENST00000518711	LEMD3	Q9Y2U8	911 aa		7.32	□□□□□ -1.24
SPIDR-208	ENST00000518711	TAF1	P21675	1872 aa		7.32	□□□□□ -1.24
SPIDR-208	ENST00000518711	MED23	Q9ULK4	1368 aa		7.32	□□□□□ -1.24
SPIDR-208	ENST00000518711	COL2A1	P02458	1487 aa	Predicted RBP	7.31	□□□□□ -1.24
SPIDR-208	ENST00000518711	IGF2BP3	O00425	579 aa	Known RBP eCLIP	7.31	□□□□□ -1.24
SPIDR-208	ENST00000518711	GNRH1	P01148	92 aa		7.31	□□□□□ -1.24
SPIDR-208	ENST00000518711	ANXA1	P04083	346 aa		7.31	□□□□□ -1.24
SPIDR-208	ENST00000518711	CCL5	P13501	91 aa		7.31	□□□□□ -1.24
SPIDR-208	ENST00000518711	TMPO	P42166	694 aa	Known RBP	7.31	□□□□□ -1.24
SPIDR-208	ENST00000518711	ATRX	P46100	2492 aa		7.31	□□□□□ -1.24
SPIDR-208	ENST00000518711	TTLL12	Q14166	644 aa	Predicted RBP	7.31	□□□□□ -1.24
SPIDR-208	ENST00000518711	HDGFL1	Q5TGJ6	251 aa		7.31	□□□□□ -1.24
SPIDR-208	ENST00000518711	ERMP1	Q7Z2K6	904 aa		7.31	□□□□□ -1.24
SPIDR-208	ENST00000518711	ANKRD18A	Q8IVF6	992 aa		7.31	□□□□□ -1.24
SPIDR-208	ENST00000518711	CHPF2	Q9P2E5	772 aa		7.31	□□□□□ -1.24
SPIDR-208	ENST00000518711	FAM86C2P	A6NEL3	165 aa		7.3	□□□□□ -1.24
SPIDR-208	ENST00000518711	ATP5J2-PTCD1	G3V325	749 aa		7.3	□□□□□ -1.24
SPIDR-208	ENST00000518711	ITGB8	P26012	769 aa		7.3	□□□□□ -1.24
SPIDR-208	ENST00000518711	FKBP1A	P62942	108 aa	Known RBP	7.3	□□□□□ -1.24
SPIDR-208	ENST00000518711	TTLL5	Q6EMB2	1281 aa		7.3	□□□□□ -1.24
SPIDR-208	ENST00000518711	C15orf52	Q6ZUT6	534 aa	Known RBP	7.3	□□□□□ -1.24
SPIDR-208	ENST00000518711	DEFB129	Q9H1M3	183 aa		7.3	□□□□□ -1.24
SPIDR-208	ENST00000518711	TTYH1	Q9H313	450 aa	Predicted RBP	7.3	□□□□□ -1.24
SPIDR-208	ENST00000518711	ZCCHC17	Q9NP64	241 aa	Known RBP	7.3	□□□□□ -1.24
SPIDR-208	ENST00000518711	SEC31B	Q9NQW1	1179 aa		7.3	□□□□□ -1.24
SPIDR-208	ENST00000518711	MINPP1	Q9UNW1	487 aa		7.3	□□□□□ -1.24

Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms