RNA–Protein interactions for RNA: ENST00000518371.2

MRPS28-203, Transcript of mitochondrial ribosomal protein S28, humanhuman

TSL 3

Gene MRPS28, Length 783 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPS28-203ENST00000518371 WWC1Q8IX03 1113 aa7.9□□□□□ -1.14
MRPS28-203ENST00000518371 MBIPQ9NS73 344 aa7.9□□□□□ -1.14
MRPS28-203ENST00000518371 IFT57Q9NWB7 429 aa7.9□□□□□ -1.14
MRPS28-203ENST00000518371 CD2APQ9Y5K6 639 aa7.9□□□□□ -1.14
MRPS28-203ENST00000518371 ZNF831Q5JPB2 1677 aa7.89□□□□□ -1.15
MRPS28-203ENST00000518371 ELL2O00472 640 aaPredicted RBP7.89□□□□□ -1.15
MRPS28-203ENST00000518371 ZNF853P0CG23 659 aa7.89□□□□□ -1.15
MRPS28-203ENST00000518371 TM4SF1P30408 202 aa7.89□□□□□ -1.15
MRPS28-203ENST00000518371 KRT76Q01546 638 aa7.89□□□□□ -1.15
MRPS28-203ENST00000518371 GPR162Q16538 588 aa7.89□□□□□ -1.15
MRPS28-203ENST00000518371 CCDC27Q2M243 656 aa7.89□□□□□ -1.15
MRPS28-203ENST00000518371 KRT24Q2M2I5 525 aa7.89□□□□□ -1.15
MRPS28-203ENST00000518371 NBPF10Q6P3W6 841 aaKnown RBP7.89□□□□□ -1.15
MRPS28-203ENST00000518371 NBPF15Q8N660 670 aa7.89□□□□□ -1.15
MRPS28-203ENST00000518371 KDM4CQ9H3R0 1056 aa7.89□□□□□ -1.15
MRPS28-203ENST00000518371 NPHP1O15259 732 aa7.88□□□□□ -1.15
MRPS28-203ENST00000518371 MAN1A2O60476 641 aa7.88□□□□□ -1.15
MRPS28-203ENST00000518371 CAMTA2O94983 1202 aa7.88□□□□□ -1.15
MRPS28-203ENST00000518371 SERPINB2P05120 415 aa7.88□□□□□ -1.15
MRPS28-203ENST00000518371 IRS1P35568 1242 aa7.88□□□□□ -1.15
MRPS28-203ENST00000518371 FOXK2Q01167 660 aa7.88□□□□□ -1.15
MRPS28-203ENST00000518371 NNTQ13423 1086 aa7.88□□□□□ -1.15
MRPS28-203ENST00000518371 NFIXQ14938 502 aa7.88□□□□□ -1.15
MRPS28-203ENST00000518371 SKIV2LQ15477 1246 aaKnown RBP7.88□□□□□ -1.15
MRPS28-203ENST00000518371 DUSP27Q5VZP5 1158 aa7.88□□□□□ -1.15
MRPS28-203ENST00000518371 WDR63Q8IWG1 891 aa7.88□□□□□ -1.15
MRPS28-203ENST00000518371 NLGN2Q8NFZ4 835 aa7.88□□□□□ -1.15
MRPS28-203ENST00000518371 SETDB2Q96T68 719 aa7.88□□□□□ -1.15
MRPS28-203ENST00000518371 FAM117AQ9C073 453 aa7.88□□□□□ -1.15
MRPS28-203ENST00000518371 ZNF652Q9Y2D9 606 aa7.88□□□□□ -1.15
MRPS28-203ENST00000518371 MYH14Q7Z406 1995 aaKnown RBP7.88□□□□□ -1.15
MRPS28-203ENST00000518371 UBR3Q6ZT12 1888 aa7.87□□□□□ -1.15
MRPS28-203ENST00000518371 TJP1Q07157 1748 aa7.87□□□□□ -1.15
MRPS28-203ENST00000518371 QSER1Q2KHR3 1735 aa7.87□□□□□ -1.15
MRPS28-203ENST00000518371 POLRMTO00411 1230 aaKnown RBP7.87□□□□□ -1.15
MRPS28-203ENST00000518371 ANXA1P04083 346 aa7.87□□□□□ -1.15
MRPS28-203ENST00000518371 HOXB7P09629 217 aa7.87□□□□□ -1.15
MRPS28-203ENST00000518371 TIMP2P16035 220 aa7.87□□□□□ -1.15
MRPS28-203ENST00000518371 DDR1Q08345 913 aa7.87□□□□□ -1.15
MRPS28-203ENST00000518371 AIMP1Q12904 312 aaKnown RBP7.87□□□□□ -1.15
MRPS28-203ENST00000518371 HDGFL1Q5TGJ6 251 aa7.87□□□□□ -1.15
MRPS28-203ENST00000518371 TBC1D9BQ66K14 1250 aa7.87□□□□□ -1.15
MRPS28-203ENST00000518371 CLEC4GQ6UXB4 293 aa7.87□□□□□ -1.15
MRPS28-203ENST00000518371 KIF6Q6ZMV9 814 aa7.87□□□□□ -1.15
MRPS28-203ENST00000518371 TSR2Q969E8 191 aaKnown RBP7.87□□□□□ -1.15
MRPS28-203ENST00000518371 CNTNAP3BQ96NU0 1288 aa7.87□□□□□ -1.15
MRPS28-203ENST00000518371 CHMP4AQ9BY43 222 aa7.87□□□□□ -1.15
MRPS28-203ENST00000518371 CNTNAP3Q9BZ76 1288 aa7.87□□□□□ -1.15
MRPS28-203ENST00000518371 DLG5Q8TDM6 1919 aa7.87□□□□□ -1.15
MRPS28-203ENST00000518371 VIRMAQ69YN4 1812 aaKnown RBP7.87□□□□□ -1.15
MRPS28-203ENST00000518371 TUBGCP6Q96RT7 1819 aa7.87□□□□□ -1.15
MRPS28-203ENST00000518371 SIPA1L3O60292 1781 aaPredicted RBP7.87□□□□□ -1.15
MRPS28-203ENST00000518371 COL5A3P25940 1745 aaPredicted RBP7.86□□□□□ -1.15
MRPS28-203ENST00000518371 IL16Q14005 1332 aa7.86□□□□□ -1.15
MRPS28-203ENST00000518371 A0A0G2JLW4 131 aa7.86□□□□□ -1.15
MRPS28-203ENST00000518371 FAM177BA6PVY3 158 aa7.86□□□□□ -1.15
MRPS28-203ENST00000518371 ERVV-1B6SEH8 477 aa7.86□□□□□ -1.15
MRPS28-203ENST00000518371 GTF2E1P29083 439 aaPredicted RBP7.86□□□□□ -1.15
MRPS28-203ENST00000518371 WDR4P57081 412 aaKnown RBP7.86□□□□□ -1.15
MRPS28-203ENST00000518371 TGFB2P61812 414 aa7.86□□□□□ -1.15
MRPS28-203ENST00000518371 CTDSPL2Q05D32 466 aa7.86□□□□□ -1.15
MRPS28-203ENST00000518371 TTLL7Q6ZT98 887 aa7.86□□□□□ -1.15
MRPS28-203ENST00000518371 GPR161Q8N6U8 529 aaKnown RBP7.86□□□□□ -1.15
MRPS28-203ENST00000518371 C8orf58Q8NAV2 365 aa7.86□□□□□ -1.15
MRPS28-203ENST00000518371 PROCA1Q8NCQ7 364 aaPredicted RBP7.86□□□□□ -1.15
MRPS28-203ENST00000518371 CDK15Q96Q40 435 aa7.86□□□□□ -1.15
MRPS28-203ENST00000518371 DDX21Q9NR30 783 aaKnown RBP eCLIP7.86□□□□□ -1.15
MRPS28-203ENST00000518371 DBF4Q9UBU7 674 aaPredicted RBP7.86□□□□□ -1.15
MRPS28-203ENST00000518371 WWC3Q9ULE0 1092 aa7.86□□□□□ -1.15
MRPS28-203ENST00000518371 NIP7Q9Y221 180 aaKnown RBP eCLIP7.86□□□□□ -1.15
MRPS28-203ENST00000518371 UBR2Q8IWV8 1755 aa7.86□□□□□ -1.15
MRPS28-203ENST00000518371 MAP3K15Q6ZN16 1313 aa7.85□□□□□ -1.15
MRPS28-203ENST00000518371 DPEP1P16444 411 aa7.85□□□□□ -1.15
MRPS28-203ENST00000518371 ARID5BQ14865 1188 aa7.85□□□□□ -1.15
MRPS28-203ENST00000518371 HLFQ16534 295 aa7.85□□□□□ -1.15
MRPS28-203ENST00000518371 PROSER3Q2NL68 480 aa7.85□□□□□ -1.15
MRPS28-203ENST00000518371 TPTE2Q6XPS3 522 aa7.85□□□□□ -1.15
MRPS28-203ENST00000518371 COPS6Q7L5N1 327 aa7.85□□□□□ -1.15
MRPS28-203ENST00000518371 NBPF5PQ86XG9 351 aaPredicted RBP7.85□□□□□ -1.15
MRPS28-203ENST00000518371 FAM174AQ8TBP5 190 aa7.85□□□□□ -1.15
MRPS28-203ENST00000518371 XAGE3Q8WTP9 111 aa7.85□□□□□ -1.15
MRPS28-203ENST00000518371 GNL3Q9BVP2 549 aaKnown RBP eCLIP7.85□□□□□ -1.15
MRPS28-203ENST00000518371 KLF16Q9BXK1 252 aaPredicted RBP7.85□□□□□ -1.15
MRPS28-203ENST00000518371 CHPF2Q9P2E5 772 aa7.85□□□□□ -1.15
MRPS28-203ENST00000518371 CICQ96RK0 1608 aaPredicted RBP7.85□□□□□ -1.15
MRPS28-203ENST00000518371 GRIN3BO60391 1043 aa7.84□□□□□ -1.15
MRPS28-203ENST00000518371 ADH1CP00326 375 aa7.84□□□□□ -1.15
MRPS28-203ENST00000518371 NR3C2P08235 984 aa7.84□□□□□ -1.15
MRPS28-203ENST00000518371 ST5P78524 1137 aa7.84□□□□□ -1.15
MRPS28-203ENST00000518371 AGERQ15109 404 aa7.84□□□□□ -1.15
MRPS28-203ENST00000518371 TWISTNBQ3B726 338 aaPredicted RBP7.84□□□□□ -1.15
MRPS28-203ENST00000518371 SH3D19Q5HYK7 790 aa7.84□□□□□ -1.15
MRPS28-203ENST00000518371 CCDC30Q5VVM6 783 aa7.84□□□□□ -1.15
MRPS28-203ENST00000518371 ZNF385CQ66K41 422 aaPredicted RBP7.84□□□□□ -1.15
MRPS28-203ENST00000518371 TSPYL6Q8N831 410 aa7.84□□□□□ -1.15
MRPS28-203ENST00000518371 CNBD1Q8NA66 436 aa7.84□□□□□ -1.15
MRPS28-203ENST00000518371 HELBQ8NG08 1087 aaPredicted RBP7.84□□□□□ -1.15
MRPS28-203ENST00000518371 DDRGK1Q96HY6 314 aa7.84□□□□□ -1.15
MRPS28-203ENST00000518371 STK31Q9BXU1 1019 aa7.84□□□□□ -1.15
MRPS28-203ENST00000518371 MYH16Q9H6N6 1097 aa7.84□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms