RNA–Protein interactions for RNA: ENST00000517554.1

MTCL1-204, Transcript of microtubule crosslinking factor 1, humanhuman

TSL 1 (best)

Gene MTCL1, Length 1,554 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MTCL1-204ENST00000517554 FMR1Q06787 632 aaKnown RBP eCLIP26.2■■□□□ 1.79
MTCL1-204ENST00000517554 CAVIN4Q5BKX8 364 aa26.2■■□□□ 1.79
MTCL1-204ENST00000517554 ADORA1P30542 326 aa26.2■■□□□ 1.78
MTCL1-204ENST00000517554 RRP1P56182 461 aaKnown RBP26.2■■□□□ 1.78
MTCL1-204ENST00000517554 TIMM10P62072 90 aa26.2■■□□□ 1.78
MTCL1-204ENST00000517554 KIF4BQ2VIQ3 1234 aa26.2■■□□□ 1.78
MTCL1-204ENST00000517554 KIAA0825Q8IV33 1275 aa26.2■■□□□ 1.78
MTCL1-204ENST00000517554 CEP350Q5VT06 3117 aa26.2■■□□□ 1.78
MTCL1-204ENST00000517554 SIRT2Q8IXJ6 389 aa26.19■■□□□ 1.78
MTCL1-204ENST00000517554 ZC3H15Q8WU90 426 aaKnown RBP26.19■■□□□ 1.78
MTCL1-204ENST00000517554 MYOZ2Q9NPC6 264 aa26.19■■□□□ 1.78
MTCL1-204ENST00000517554 APLP1P51693 650 aa26.18■■□□□ 1.78
MTCL1-204ENST00000517554 G3BP1Q13283 466 aaKnown RBP eCLIP26.18■■□□□ 1.78
MTCL1-204ENST00000517554 VPS37DQ86XT2 251 aa26.18■■□□□ 1.78
MTCL1-204ENST00000517554 NOP58Q9Y2X3 529 aaKnown RBP26.18■■□□□ 1.78
MTCL1-204ENST00000517554 FKBP1AP62942 108 aaKnown RBP26.17■■□□□ 1.78
MTCL1-204ENST00000517554 TRAF5O00463 557 aa26.16■■□□□ 1.78
MTCL1-204ENST00000517554 SURF6O75683 361 aaKnown RBP26.16■■□□□ 1.78
MTCL1-204ENST00000517554 GRIK5Q16478 980 aa26.16■■□□□ 1.78
MTCL1-204ENST00000517554 COL1A1P02452 1464 aaPredicted RBP26.16■■□□□ 1.78
MTCL1-204ENST00000517554 A0A1B0GUL7 405 aa26.16■■□□□ 1.78
MTCL1-204ENST00000517554 DLK2Q6UY11 383 aa26.16■■□□□ 1.78
MTCL1-204ENST00000517554 GLIS2Q9BZE0 524 aaPredicted RBP26.16■■□□□ 1.78
MTCL1-204ENST00000517554 PHKA1P46020 1223 aa26.15■■□□□ 1.78
MTCL1-204ENST00000517554 SCARF1Q14162 830 aa26.15■■□□□ 1.78
MTCL1-204ENST00000517554 MFSD14BQ5SR56 506 aa26.15■■□□□ 1.78
MTCL1-204ENST00000517554 ARAP2Q8WZ64 1704 aa26.14■■□□□ 1.78
MTCL1-204ENST00000517554 F8W031 263 aaPredicted RBP26.14■■□□□ 1.78
MTCL1-204ENST00000517554 CHAF1AQ13111 956 aaPredicted RBP26.14■■□□□ 1.78
MTCL1-204ENST00000517554 NBPF9Q3BBW0 867 aa26.14■■□□□ 1.78
MTCL1-204ENST00000517554 OGFOD1Q8N543 542 aa26.14■■□□□ 1.78
MTCL1-204ENST00000517554 PCDHAC2Q9Y5I4 1007 aa26.14■■□□□ 1.78
MTCL1-204ENST00000517554 RPAP2Q8IXW5 612 aaPredicted RBP26.13■■□□□ 1.77
MTCL1-204ENST00000517554 XAGE2Q96GT9 111 aa26.13■■□□□ 1.77
MTCL1-204ENST00000517554 ZBED3Q96IU2 234 aaPredicted RBP26.13■■□□□ 1.77
MTCL1-204ENST00000517554 AKAP2Q9Y2D5 859 aa26.13■■□□□ 1.77
MTCL1-204ENST00000517554 WNT10BO00744 389 aa26.12■■□□□ 1.77
MTCL1-204ENST00000517554 CCDC102BQ68D86 513 aa26.12■■□□□ 1.77
MTCL1-204ENST00000517554 GGA3Q9NZ52 723 aa26.12■■□□□ 1.77
MTCL1-204ENST00000517554 FRAT2O75474 233 aaPredicted RBP26.12■■□□□ 1.77
MTCL1-204ENST00000517554 EXOC6BQ9Y2D4 811 aa26.12■■□□□ 1.77
MTCL1-204ENST00000517554 USP48Q86UV5 1035 aa26.11■■□□□ 1.77
MTCL1-204ENST00000517554 DNAJC5GQ8N7S2 189 aa26.11■■□□□ 1.77
MTCL1-204ENST00000517554 CHMP4BQ9H444 224 aaKnown RBP26.11■■□□□ 1.77
MTCL1-204ENST00000517554 MMP14P50281 582 aa26.1■■□□□ 1.77
MTCL1-204ENST00000517554 ANGEL2Q5VTE6 544 aaKnown RBP26.1■■□□□ 1.77
MTCL1-204ENST00000517554 CDC37L1Q7L3B6 337 aa26.1■■□□□ 1.77
MTCL1-204ENST00000517554 NEUROD6Q96NK8 337 aa26.1■■□□□ 1.77
MTCL1-204ENST00000517554 HDAC9Q9UKV0 1011 aa26.1■■□□□ 1.77
MTCL1-204ENST00000517554 AOX1Q06278 1338 aa26.1■■□□□ 1.77
MTCL1-204ENST00000517554 OS9Q13438 667 aaPredicted RBP26.09■■□□□ 1.77
MTCL1-204ENST00000517554 CST9Q5W186 159 aa26.09■■□□□ 1.77
MTCL1-204ENST00000517554 GPR108Q9NPR9 543 aa26.09■■□□□ 1.77
MTCL1-204ENST00000517554 SCAF8Q9UPN6 1271 aaKnown RBP26.09■■□□□ 1.77
MTCL1-204ENST00000517554 ADM5C9JUS6 153 aa26.08■■□□□ 1.77
MTCL1-204ENST00000517554 TNNI3KQ59H18 835 aa26.08■■□□□ 1.77
MTCL1-204ENST00000517554 FPGT-TNNI3KV9GXZ4 949 aa26.08■■□□□ 1.77
MTCL1-204ENST00000517554 ZBTB22O15209 634 aa26.07■■□□□ 1.76
MTCL1-204ENST00000517554 KRT26Q7Z3Y9 468 aa26.07■■□□□ 1.76
MTCL1-204ENST00000517554 MTMR14Q8NCE2 650 aa26.07■■□□□ 1.76
MTCL1-204ENST00000517554 DCPSQ96C86 337 aaKnown RBP26.07■■□□□ 1.76
MTCL1-204ENST00000517554 CREBZFQ9NS37 354 aa26.07■■□□□ 1.76
MTCL1-204ENST00000517554 TTF2Q9UNY4 1162 aaKnown RBP26.07■■□□□ 1.76
MTCL1-204ENST00000517554 CFAP100Q494V2 611 aa26.07■■□□□ 1.76
MTCL1-204ENST00000517554 TBC1D22AQ8WUA7 517 aa26.07■■□□□ 1.76
MTCL1-204ENST00000517554 POLR2AP24928 1970 aaKnown RBP26.06■■□□□ 1.76
MTCL1-204ENST00000517554 TMEM88BA6NKF7 163 aa26.06■■□□□ 1.76
MTCL1-204ENST00000517554 RASGRF1Q13972 1273 aa26.06■■□□□ 1.76
MTCL1-204ENST00000517554 PRMT6Q96LA8 375 aaPredicted RBP26.06■■□□□ 1.76
MTCL1-204ENST00000517554 GNL3LQ9NVN8 582 aaKnown RBP26.06■■□□□ 1.76
MTCL1-204ENST00000517554 EAF2Q96CJ1 260 aaPredicted RBP26.05■■□□□ 1.76
MTCL1-204ENST00000517554 CRBNQ96SW2 442 aa26.05■■□□□ 1.76
MTCL1-204ENST00000517554 DBNDD2Q9BQY9 259 aa26.05■■□□□ 1.76
MTCL1-204ENST00000517554 SPDYE2BA6NHP3 402 aa26.04■■□□□ 1.76
MTCL1-204ENST00000517554 SPDYE6P0CI01 402 aa26.04■■□□□ 1.76
MTCL1-204ENST00000517554 DLGAP5Q15398 846 aa26.04■■□□□ 1.76
MTCL1-204ENST00000517554 WDR66Q8TBY9 1149 aa26.04■■□□□ 1.76
MTCL1-204ENST00000517554 DENND2AQ9ULE3 1009 aa26.04■■□□□ 1.76
MTCL1-204ENST00000517554 PITPNM2Q9BZ72 1349 aa26.04■■□□□ 1.76
MTCL1-204ENST00000517554 SEMA3EO15041 775 aa26.03■■□□□ 1.76
MTCL1-204ENST00000517554 TLR7Q9NYK1 1049 aaKnown RBP26.03■■□□□ 1.76
MTCL1-204ENST00000517554 HMMRO75330 724 aa26.03■■□□□ 1.76
MTCL1-204ENST00000517554 PI16Q6UXB8 463 aa26.03■■□□□ 1.76
MTCL1-204ENST00000517554 DBNLQ9UJU6 430 aaKnown RBP26.03■■□□□ 1.76
MTCL1-204ENST00000517554 SERPINA10Q9UK55 444 aa26.03■■□□□ 1.76
MTCL1-204ENST00000517554 MYH13Q9UKX3 1938 aa26.03■■□□□ 1.76
MTCL1-204ENST00000517554 CELF2O95319 508 aaKnown RBP26.02■■□□□ 1.76
MTCL1-204ENST00000517554 PRDX5P30044 214 aa26.02■■□□□ 1.76
MTCL1-204ENST00000517554 SULF1Q8IWU6 871 aa26.02■■□□□ 1.76
MTCL1-204ENST00000517554 RHPN1Q8TCX5 695 aa26.02■■□□□ 1.76
MTCL1-204ENST00000517554 PCDHB15Q9Y5E8 787 aa26.02■■□□□ 1.76
MTCL1-204ENST00000517554 ARID4AP29374 1257 aaPredicted RBP26.01■■□□□ 1.75
MTCL1-204ENST00000517554 CRKP46108 304 aa26.01■■□□□ 1.75
MTCL1-204ENST00000517554 CCDC8Q9H0W5 538 aaPredicted RBP26.01■■□□□ 1.75
MTCL1-204ENST00000517554 SALL1Q9NSC2 1324 aa26.01■■□□□ 1.75
MTCL1-204ENST00000517554 HMG20BQ9P0W2 317 aa26.01■■□□□ 1.75
MTCL1-204ENST00000517554 SUGT1Q9Y2Z0 365 aa26.01■■□□□ 1.75
MTCL1-204ENST00000517554 GORABQ5T7V8 394 aa26■■□□□ 1.75
MTCL1-204ENST00000517554 ERC1Q8IUD2 1116 aa26■■□□□ 1.75
MTCL1-204ENST00000517554 IL1RAPL2Q9NP60 686 aa26■■□□□ 1.75
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms