RNA–Protein interactions for RNA: ENST00000517533.5

CTNNA1-202, Transcript of catenin alpha 1, humanhuman

TSL 3

Gene CTNNA1, Length 579 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-202ENST00000517533 TRIM33Q9UPN9 1127 aa8.28□□□□□ -1.08
CTNNA1-202ENST00000517533 FGRP09769 529 aa8.27□□□□□ -1.09
CTNNA1-202ENST00000517533 GBP2P32456 591 aaPredicted RBP8.27□□□□□ -1.09
CTNNA1-202ENST00000517533 LIG3P49916 1009 aa8.27□□□□□ -1.09
CTNNA1-202ENST00000517533 ZNF423Q2M1K9 1284 aa8.27□□□□□ -1.09
CTNNA1-202ENST00000517533 CEP135Q66GS9 1140 aa8.27□□□□□ -1.09
CTNNA1-202ENST00000517533 FBXL19Q6PCT2 694 aa8.27□□□□□ -1.09
CTNNA1-202ENST00000517533 FOXR1Q6PIV2 292 aa8.27□□□□□ -1.09
CTNNA1-202ENST00000517533 ZNF662Q6ZS27 426 aa8.27□□□□□ -1.09
CTNNA1-202ENST00000517533 SV2BQ7L1I2 683 aa8.27□□□□□ -1.09
CTNNA1-202ENST00000517533 DPH6Q7L8W6 267 aa8.27□□□□□ -1.09
CTNNA1-202ENST00000517533 STK35Q8TDR2 534 aa8.27□□□□□ -1.09
CTNNA1-202ENST00000517533 PLD4Q96BZ4 506 aa8.27□□□□□ -1.09
CTNNA1-202ENST00000517533 HIRIP3Q9BW71 556 aaPredicted RBP8.27□□□□□ -1.09
CTNNA1-202ENST00000517533 SOX13Q9UN79 622 aa8.27□□□□□ -1.09
CTNNA1-202ENST00000517533 TFE3P19532 575 aaPredicted RBP8.26□□□□□ -1.09
CTNNA1-202ENST00000517533 MX2P20592 715 aa8.26□□□□□ -1.09
CTNNA1-202ENST00000517533 ADH7P40394 386 aa8.26□□□□□ -1.09
CTNNA1-202ENST00000517533 FAM160A1Q05DH4 1040 aa8.26□□□□□ -1.09
CTNNA1-202ENST00000517533 NEUROD1Q13562 356 aa8.26□□□□□ -1.09
CTNNA1-202ENST00000517533 GPRASP2Q96D09 838 aa8.26□□□□□ -1.09
CTNNA1-202ENST00000517533 DNAJC2Q99543 621 aaKnown RBP8.26□□□□□ -1.09
CTNNA1-202ENST00000517533 KCNQ5Q9NR82 932 aa8.26□□□□□ -1.09
CTNNA1-202ENST00000517533 NEURL1BA8MQ27 555 aa8.25□□□□□ -1.09
CTNNA1-202ENST00000517533 ADARB2-AS1A8MUL3 147 aa8.25□□□□□ -1.09
CTNNA1-202ENST00000517533 GHRHP01286 108 aa8.25□□□□□ -1.09
CTNNA1-202ENST00000517533 PF4P02776 101 aa8.25□□□□□ -1.09
CTNNA1-202ENST00000517533 ATF4P18848 351 aaPredicted RBP8.25□□□□□ -1.09
CTNNA1-202ENST00000517533 EIF4A3P38919 411 aaKnown RBP8.25□□□□□ -1.09
CTNNA1-202ENST00000517533 HGSNATQ68CP4 663 aa8.25□□□□□ -1.09
CTNNA1-202ENST00000517533 RASGRP4Q8TDF6 673 aa8.25□□□□□ -1.09
CTNNA1-202ENST00000517533 ZNF296Q8WUU4 475 aaPredicted RBP8.25□□□□□ -1.09
CTNNA1-202ENST00000517533 SPON2Q9BUD6 331 aa8.25□□□□□ -1.09
CTNNA1-202ENST00000517533 SMG9Q9H0W8 520 aaKnown RBP8.25□□□□□ -1.09
CTNNA1-202ENST00000517533 SH2B1Q9NRF2 756 aaPredicted RBP8.25□□□□□ -1.09
CTNNA1-202ENST00000517533 STARD13Q9Y3M8 1113 aa8.25□□□□□ -1.09
CTNNA1-202ENST00000517533 ARAFP10398 606 aa8.24□□□□□ -1.09
CTNNA1-202ENST00000517533 CRKP46108 304 aa8.24□□□□□ -1.09
CTNNA1-202ENST00000517533 KRT76Q01546 638 aa8.24□□□□□ -1.09
CTNNA1-202ENST00000517533 ARID5AQ03989 594 aa8.24□□□□□ -1.09
CTNNA1-202ENST00000517533 C1orf229Q6ZS94 237 aaPredicted RBP8.24□□□□□ -1.09
CTNNA1-202ENST00000517533 RELL1Q8IUW5 271 aa8.24□□□□□ -1.09
CTNNA1-202ENST00000517533 KIAA0825Q8IV33 1275 aa8.24□□□□□ -1.09
CTNNA1-202ENST00000517533 LACRTQ9GZZ8 138 aa8.24□□□□□ -1.09
CTNNA1-202ENST00000517533 AVENQ9NQS1 362 aaPredicted RBP8.24□□□□□ -1.09
CTNNA1-202ENST00000517533 NXF1Q9UBU9 619 aaKnown RBP8.24□□□□□ -1.09
CTNNA1-202ENST00000517533 PCDHB5Q9Y5E4 795 aa8.24□□□□□ -1.09
CTNNA1-202ENST00000517533 H3BM21 787 aa8.23□□□□□ -1.09
CTNNA1-202ENST00000517533 GREM1O60565 184 aa8.23□□□□□ -1.09
CTNNA1-202ENST00000517533 BMP6P22004 513 aa8.23□□□□□ -1.09
CTNNA1-202ENST00000517533 GRIK5Q16478 980 aa8.23□□□□□ -1.09
CTNNA1-202ENST00000517533 RPS26P11Q5JNZ5 115 aaPredicted RBP8.23□□□□□ -1.09
CTNNA1-202ENST00000517533 TTBK2Q6IQ55 1244 aa8.23□□□□□ -1.09
CTNNA1-202ENST00000517533 AGMOQ6ZNB7 445 aa8.23□□□□□ -1.09
CTNNA1-202ENST00000517533 BSNDQ8WZ55 320 aa8.23□□□□□ -1.09
CTNNA1-202ENST00000517533 ADAM19Q9H013 955 aa8.23□□□□□ -1.09
CTNNA1-202ENST00000517533 GGA1Q9UJY5 639 aa8.23□□□□□ -1.09
CTNNA1-202ENST00000517533 ERBB4Q15303 1308 aa8.23□□□□□ -1.09
CTNNA1-202ENST00000517533 B3GALT4O96024 378 aa8.22□□□□□ -1.09
CTNNA1-202ENST00000517533 EPHA1P21709 976 aa8.22□□□□□ -1.09
CTNNA1-202ENST00000517533 ADH6P28332 368 aa8.22□□□□□ -1.09
CTNNA1-202ENST00000517533 GTF2F1P35269 517 aaKnown RBP eCLIP8.22□□□□□ -1.09
CTNNA1-202ENST00000517533 PCDH1Q08174 1060 aa8.22□□□□□ -1.09
CTNNA1-202ENST00000517533 CAMK2GQ13555 558 aaPredicted RBP8.22□□□□□ -1.09
CTNNA1-202ENST00000517533 GNL2Q13823 731 aaKnown RBP8.22□□□□□ -1.09
CTNNA1-202ENST00000517533 PCNX4Q63HM2 1172 aa8.22□□□□□ -1.09
CTNNA1-202ENST00000517533 PSAPL1Q6NUJ1 521 aa8.22□□□□□ -1.09
CTNNA1-202ENST00000517533 CEP44Q9C0F1 390 aa8.22□□□□□ -1.09
CTNNA1-202ENST00000517533 CLEC4MQ9H2X3 399 aaPredicted RBP8.22□□□□□ -1.09
CTNNA1-202ENST00000517533 MBIPQ9NS73 344 aa8.22□□□□□ -1.09
CTNNA1-202ENST00000517533 UBP1Q9NZI7 540 aa8.22□□□□□ -1.09
CTNNA1-202ENST00000517533 GPN3Q9UHW5 284 aaPredicted RBP8.22□□□□□ -1.09
CTNNA1-202ENST00000517533 IGF1RP08069 1367 aa8.22□□□□□ -1.09
CTNNA1-202ENST00000517533 SMNDC1O75940 238 aaKnown RBP eCLIP8.21□□□□□ -1.1
CTNNA1-202ENST00000517533 ATP2B1P20020 1258 aa8.21□□□□□ -1.1
CTNNA1-202ENST00000517533 BAG6P46379 1132 aa8.21□□□□□ -1.1
CTNNA1-202ENST00000517533 ELMSAN1Q6PJG2 1045 aa8.21□□□□□ -1.1
CTNNA1-202ENST00000517533 MPRIPQ6WCQ1 1025 aa8.21□□□□□ -1.1
CTNNA1-202ENST00000517533 BNC2Q6ZN30 1099 aaPredicted RBP8.21□□□□□ -1.1
CTNNA1-202ENST00000517533 FBXO27Q8NI29 283 aa8.21□□□□□ -1.1
CTNNA1-202ENST00000517533 GRIN3AQ8TCU5 1115 aa8.21□□□□□ -1.1
CTNNA1-202ENST00000517533 COL25A1Q9BXS0 654 aaPredicted RBP8.21□□□□□ -1.1
CTNNA1-202ENST00000517533 LNPKQ9C0E8 428 aa8.21□□□□□ -1.1
CTNNA1-202ENST00000517533 GINM1Q9NU53 330 aa8.21□□□□□ -1.1
CTNNA1-202ENST00000517533 VSIG8P0DPA2 414 aa8.2□□□□□ -1.1
CTNNA1-202ENST00000517533 ESRRAP11474 423 aaPredicted RBP8.2□□□□□ -1.1
CTNNA1-202ENST00000517533 LMNB2Q03252 620 aa8.2□□□□□ -1.1
CTNNA1-202ENST00000517533 PTPN11Q06124 597 aaPredicted RBP8.2□□□□□ -1.1
CTNNA1-202ENST00000517533 PWP1Q13610 501 aa8.2□□□□□ -1.1
CTNNA1-202ENST00000517533 PCSK7Q16549 785 aa8.2□□□□□ -1.1
CTNNA1-202ENST00000517533 KANK3Q6NY19 840 aa8.2□□□□□ -1.1
CTNNA1-202ENST00000517533 C20orf204Q6ZNR8 217 aa8.2□□□□□ -1.1
CTNNA1-202ENST00000517533 GOLM1Q8NBJ4 401 aa8.2□□□□□ -1.1
CTNNA1-202ENST00000517533 NUDT8Q8WV74 236 aa8.2□□□□□ -1.1
CTNNA1-202ENST00000517533 TMEM39AQ9NV64 488 aa8.2□□□□□ -1.1
CTNNA1-202ENST00000517533 ELOA3CA0A087WX78 387 aaPredicted RBP8.19□□□□□ -1.1
CTNNA1-202ENST00000517533 ELOA3DA6NLF2 546 aaPredicted RBP8.19□□□□□ -1.1
CTNNA1-202ENST00000517533 SOX1O00570 391 aaPredicted RBP8.19□□□□□ -1.1
CTNNA1-202ENST00000517533 PTPRAP18433 802 aa8.19□□□□□ -1.1
CTNNA1-202ENST00000517533 RBL2Q08999 1139 aa8.19□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 12.6 ms