RNA–Protein interactions for RNA: ENST00000517352.1

TNFRSF11B-202, Transcript of TNF receptor superfamily member 11b, humanhuman

TSL 1 (best)

Gene TNFRSF11B, Length 1,144 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF11B-202ENST00000517352 PIP4P2Q8N4L2 257 aa9.34□□□□□ -0.91
TNFRSF11B-202ENST00000517352 LINS1Q8NG48 757 aa9.34□□□□□ -0.91
TNFRSF11B-202ENST00000517352 INHBEP58166 350 aa9.33□□□□□ -0.92
TNFRSF11B-202ENST00000517352 CHRNDQ07001 517 aa9.33□□□□□ -0.92
TNFRSF11B-202ENST00000517352 SLC4A10Q6U841 1118 aa9.33□□□□□ -0.92
TNFRSF11B-202ENST00000517352 WWC1Q8IX03 1113 aa9.33□□□□□ -0.92
TNFRSF11B-202ENST00000517352 MANSC4A6NHS7 340 aaPredicted RBP9.32□□□□□ -0.92
TNFRSF11B-202ENST00000517352 H7C1W4 665 aa9.32□□□□□ -0.92
TNFRSF11B-202ENST00000517352 FKTNO75072 461 aa9.32□□□□□ -0.92
TNFRSF11B-202ENST00000517352 TAF5LO75529 589 aa9.32□□□□□ -0.92
TNFRSF11B-202ENST00000517352 CCDC27Q2M243 656 aa9.32□□□□□ -0.92
TNFRSF11B-202ENST00000517352 LDHAL6AQ6ZMR3 332 aa9.32□□□□□ -0.92
TNFRSF11B-202ENST00000517352 G2E3Q7L622 706 aa9.32□□□□□ -0.92
TNFRSF11B-202ENST00000517352 HELBQ8NG08 1087 aaPredicted RBP9.32□□□□□ -0.92
TNFRSF11B-202ENST00000517352 ZNF296Q8WUU4 475 aaPredicted RBP9.32□□□□□ -0.92
TNFRSF11B-202ENST00000517352 GMLQ99445 158 aa9.32□□□□□ -0.92
TNFRSF11B-202ENST00000517352 DEFB129Q9H1M3 183 aa9.32□□□□□ -0.92
TNFRSF11B-202ENST00000517352 HPS5Q9UPZ3 1129 aa9.32□□□□□ -0.92
TNFRSF11B-202ENST00000517352 SSUH2Q9Y2M2 353 aa9.32□□□□□ -0.92
TNFRSF11B-202ENST00000517352 ANKRD36CQ5JPF3 1778 aa9.32□□□□□ -0.92
TNFRSF11B-202ENST00000517352 TRPM7Q96QT4 1865 aa9.32□□□□□ -0.92
TNFRSF11B-202ENST00000517352 CLRN2A0PK11 232 aa9.31□□□□□ -0.92
TNFRSF11B-202ENST00000517352 WTIPA6NIX2 430 aaPredicted RBP9.31□□□□□ -0.92
TNFRSF11B-202ENST00000517352 GPR25O00155 361 aa9.31□□□□□ -0.92
TNFRSF11B-202ENST00000517352 IREB2P48200 963 aaKnown RBP9.31□□□□□ -0.92
TNFRSF11B-202ENST00000517352 TNNI2P48788 182 aa9.31□□□□□ -0.92
TNFRSF11B-202ENST00000517352 TNFAIP1Q13829 316 aa9.31□□□□□ -0.92
TNFRSF11B-202ENST00000517352 ARHGEF6Q15052 776 aa9.31□□□□□ -0.92
TNFRSF11B-202ENST00000517352 SPDYE1Q8NFV5 336 aaPredicted RBP9.31□□□□□ -0.92
TNFRSF11B-202ENST00000517352 CD209Q9NNX6 404 aa9.31□□□□□ -0.92
TNFRSF11B-202ENST00000517352 JAG2Q9Y219 1238 aa9.31□□□□□ -0.92
TNFRSF11B-202ENST00000517352 DUOX1Q9NRD9 1551 aa9.31□□□□□ -0.92
TNFRSF11B-202ENST00000517352 IL16Q14005 1332 aa9.31□□□□□ -0.92
TNFRSF11B-202ENST00000517352 ZEB1P37275 1124 aaPredicted RBP9.3□□□□□ -0.92
TNFRSF11B-202ENST00000517352 TM4SF4P48230 202 aa9.3□□□□□ -0.92
TNFRSF11B-202ENST00000517352 FXR2P51116 673 aaKnown RBP eCLIP9.3□□□□□ -0.92
TNFRSF11B-202ENST00000517352 PTPN12Q05209 780 aaKnown RBP9.3□□□□□ -0.92
TNFRSF11B-202ENST00000517352 CFAP100Q494V2 611 aa9.3□□□□□ -0.92
TNFRSF11B-202ENST00000517352 LMBR1LQ6UX01 489 aa9.3□□□□□ -0.92
TNFRSF11B-202ENST00000517352 WDR63Q8IWG1 891 aa9.3□□□□□ -0.92
TNFRSF11B-202ENST00000517352 PLA2G12BQ9BX93 195 aa9.3□□□□□ -0.92
TNFRSF11B-202ENST00000517352 PPP2R3BQ9Y5P8 575 aa9.3□□□□□ -0.92
TNFRSF11B-202ENST00000517352 CSF1RP07333 972 aa9.29□□□□□ -0.92
TNFRSF11B-202ENST00000517352 KLRK1P26718 216 aa9.29□□□□□ -0.92
TNFRSF11B-202ENST00000517352 EXOSC9Q06265 439 aaKnown RBP9.29□□□□□ -0.92
TNFRSF11B-202ENST00000517352 CAVIN4Q5BKX8 364 aa9.29□□□□□ -0.92
TNFRSF11B-202ENST00000517352 SPRYD7Q5W111 196 aa9.29□□□□□ -0.92
TNFRSF11B-202ENST00000517352 FBXO46Q6PJ61 603 aaPredicted RBP9.29□□□□□ -0.92
TNFRSF11B-202ENST00000517352 TXNRD3Q86VQ6 643 aa9.29□□□□□ -0.92
TNFRSF11B-202ENST00000517352 FAM9BQ8IZU0 186 aa9.29□□□□□ -0.92
TNFRSF11B-202ENST00000517352 TMOD2Q9NZR1 351 aa9.29□□□□□ -0.92
TNFRSF11B-202ENST00000517352 TRIM17Q9Y577 477 aa9.29□□□□□ -0.92
TNFRSF11B-202ENST00000517352 FANCIQ9NVI1 1328 aa9.29□□□□□ -0.92
TNFRSF11B-202ENST00000517352 F6X3S4 739 aa9.28□□□□□ -0.92
TNFRSF11B-202ENST00000517352 GRM8O00222 908 aa9.28□□□□□ -0.92
TNFRSF11B-202ENST00000517352 ZBTB48P10074 688 aaPredicted RBP9.28□□□□□ -0.92
TNFRSF11B-202ENST00000517352 HIBADHP31937 336 aaKnown RBP9.28□□□□□ -0.92
TNFRSF11B-202ENST00000517352 MFSD14BQ5SR56 506 aa9.28□□□□□ -0.92
TNFRSF11B-202ENST00000517352 ANKRD13AQ8IZ07 590 aa9.28□□□□□ -0.92
TNFRSF11B-202ENST00000517352 ERO1AQ96HE7 468 aa9.28□□□□□ -0.92
TNFRSF11B-202ENST00000517352 SRCIN1Q9C0H9 1055 aa9.28□□□□□ -0.92
TNFRSF11B-202ENST00000517352 TTF2Q9UNY4 1162 aaKnown RBP9.28□□□□□ -0.92
TNFRSF11B-202ENST00000517352 CSADQ9Y600 493 aa9.28□□□□□ -0.92
TNFRSF11B-202ENST00000517352 TAF1P21675 1872 aa9.28□□□□□ -0.92
TNFRSF11B-202ENST00000517352 THSD7BQ9C0I4 1608 aa9.27□□□□□ -0.92
TNFRSF11B-202ENST00000517352 LAMB2P55268 1798 aa9.27□□□□□ -0.92
TNFRSF11B-202ENST00000517352 SLC34A2O95436 690 aa9.27□□□□□ -0.93
TNFRSF11B-202ENST00000517352 CHAF1AQ13111 956 aaPredicted RBP9.27□□□□□ -0.93
TNFRSF11B-202ENST00000517352 RASA3Q14644 834 aa9.27□□□□□ -0.93
TNFRSF11B-202ENST00000517352 INTS3Q68E01 1043 aaKnown RBP9.27□□□□□ -0.93
TNFRSF11B-202ENST00000517352 IFNL1Q8IU54 200 aa9.27□□□□□ -0.93
TNFRSF11B-202ENST00000517352 HOOK2Q96ED9 719 aa9.27□□□□□ -0.93
TNFRSF11B-202ENST00000517352 ZNF594Q96JF6 807 aaPredicted RBP9.27□□□□□ -0.93
TNFRSF11B-202ENST00000517352 TMEM106CQ9BVX2 250 aa9.27□□□□□ -0.93
TNFRSF11B-202ENST00000517352 FZD1Q9UP38 647 aa9.27□□□□□ -0.93
TNFRSF11B-202ENST00000517352 ZNF609O15014 1411 aa9.27□□□□□ -0.93
TNFRSF11B-202ENST00000517352 LRRC37AA6NMS7 1700 aa9.27□□□□□ -0.93
TNFRSF11B-202ENST00000517352 DDX60Q8IY21 1712 aaKnown RBP9.27□□□□□ -0.93
TNFRSF11B-202ENST00000517352 CASP8AP2Q9UKL3 1982 aa9.26□□□□□ -0.93
TNFRSF11B-202ENST00000517352 UNCXA6NJT0 531 aa9.26□□□□□ -0.93
TNFRSF11B-202ENST00000517352 TCP10L2B9ZVM9 353 aa9.26□□□□□ -0.93
TNFRSF11B-202ENST00000517352 SNAP23O00161 211 aa9.26□□□□□ -0.93
TNFRSF11B-202ENST00000517352 VAMP4O75379 141 aa9.26□□□□□ -0.93
TNFRSF11B-202ENST00000517352 FKBP1AP62942 108 aaKnown RBP9.26□□□□□ -0.93
TNFRSF11B-202ENST00000517352 KIF22Q14807 665 aa9.26□□□□□ -0.93
TNFRSF11B-202ENST00000517352 METTL24Q5JXM2 366 aa9.26□□□□□ -0.93
TNFRSF11B-202ENST00000517352 LDLRAD1Q5T700 205 aa9.26□□□□□ -0.93
TNFRSF11B-202ENST00000517352 PRPF38BQ5VTL8 546 aaKnown RBP9.26□□□□□ -0.93
TNFRSF11B-202ENST00000517352 NBPF11Q86T75 865 aa9.26□□□□□ -0.93
TNFRSF11B-202ENST00000517352 PRMT6Q96LA8 375 aaPredicted RBP9.26□□□□□ -0.93
TNFRSF11B-202ENST00000517352 ELP3Q9H9T3 547 aa9.26□□□□□ -0.93
TNFRSF11B-202ENST00000517352 EFCC1Q9HA90 598 aa9.26□□□□□ -0.93
TNFRSF11B-202ENST00000517352 FBXO3Q9UK99 471 aa9.26□□□□□ -0.93
TNFRSF11B-202ENST00000517352 PAPPA2Q9BXP8 1791 aa9.25□□□□□ -0.93
TNFRSF11B-202ENST00000517352 ALDH1L1O75891 902 aa9.25□□□□□ -0.93
TNFRSF11B-202ENST00000517352 IL1R1P14778 569 aa9.25□□□□□ -0.93
TNFRSF11B-202ENST00000517352 GYG1P46976 350 aa9.25□□□□□ -0.93
TNFRSF11B-202ENST00000517352 FOXO4P98177 505 aa9.25□□□□□ -0.93
TNFRSF11B-202ENST00000517352 UBE4AQ14139 1066 aa9.25□□□□□ -0.93
TNFRSF11B-202ENST00000517352 NOM1Q5C9Z4 860 aaKnown RBP9.25□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms