RNA–Protein interactions for RNA: ENST00000516672.1

SCARNA13-201, small Cajal body-specific RNA 13, humanhuman

BASIC

Gene SCARNA13, Length 275 nt, Biotype scaRNA, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARNA13-201ENST00000516672 CRKLP46109 303 aaKnown RBP4.91□□□□□ -1.62
SCARNA13-201ENST00000516672 SLAIN1Q8ND83 568 aa4.91□□□□□ -1.62
SCARNA13-201ENST00000516672 BCL2L12Q9HB09 334 aa4.91□□□□□ -1.62
SCARNA13-201ENST00000516672 ZFYVE28Q9HCC9 887 aa4.91□□□□□ -1.62
SCARNA13-201ENST00000516672 CACNA2D2Q9NY47 1150 aa4.91□□□□□ -1.62
SCARNA13-201ENST00000516672 PRKAG2Q9UGJ0 569 aa4.91□□□□□ -1.62
SCARNA13-201ENST00000516672 ANGPTL2Q9UKU9 493 aa4.91□□□□□ -1.62
SCARNA13-201ENST00000516672 GAKO14976 1311 aa4.91□□□□□ -1.62
SCARNA13-201ENST00000516672 MAP3K19Q56UN5 1328 aa4.91□□□□□ -1.62
SCARNA13-201ENST00000516672 LOC400499M0QZD8 3231 aa4.9□□□□□ -1.62
SCARNA13-201ENST00000516672 DCDC2BA2VCK2 349 aa4.9□□□□□ -1.63
SCARNA13-201ENST00000516672 RAD17O75943 681 aa4.9□□□□□ -1.63
SCARNA13-201ENST00000516672 ZBTB48P10074 688 aaPredicted RBP4.9□□□□□ -1.63
SCARNA13-201ENST00000516672 IL9P15248 144 aa4.9□□□□□ -1.63
SCARNA13-201ENST00000516672 HOXD10P28358 340 aa4.9□□□□□ -1.63
SCARNA13-201ENST00000516672 RBM25P49756 843 aaKnown RBP4.9□□□□□ -1.63
SCARNA13-201ENST00000516672 TAF1CQ15572 869 aaPredicted RBP4.9□□□□□ -1.63
SCARNA13-201ENST00000516672 NBPF10Q6P3W6 841 aaKnown RBP4.9□□□□□ -1.63
SCARNA13-201ENST00000516672 PODNQ7Z5L7 613 aa4.9□□□□□ -1.63
SCARNA13-201ENST00000516672 TMOD3Q9NYL9 352 aa4.9□□□□□ -1.63
SCARNA13-201ENST00000516672 ZNRF3Q9ULT6 936 aa4.9□□□□□ -1.63
SCARNA13-201ENST00000516672 CCDC61Q9Y6R9 512 aa4.9□□□□□ -1.63
SCARNA13-201ENST00000516672 SH3TC1Q8TE82 1336 aa4.9□□□□□ -1.63
SCARNA13-201ENST00000516672 PCDH11XQ9BZA7 1347 aa4.9□□□□□ -1.63
SCARNA13-201ENST00000516672 PCDH11YQ9BZA8 1340 aa4.9□□□□□ -1.63
SCARNA13-201ENST00000516672 CACNA1HO95180 2353 aa4.9□□□□□ -1.63
SCARNA13-201ENST00000516672 ZNF831Q5JPB2 1677 aa4.89□□□□□ -1.63
SCARNA13-201ENST00000516672 CFAP46Q8IYW2 2715 aa4.89□□□□□ -1.63
SCARNA13-201ENST00000516672 PIEZO2Q9H5I5 2752 aa4.89□□□□□ -1.63
SCARNA13-201ENST00000516672 CD163L1Q9NR16 1453 aa4.89□□□□□ -1.63
SCARNA13-201ENST00000516672 LAMB1P07942 1786 aa4.89□□□□□ -1.63
SCARNA13-201ENST00000516672 PRAMEF22A3QJZ6 481 aa4.89□□□□□ -1.63
SCARNA13-201ENST00000516672 PPIP5K2O43314 1243 aa4.89□□□□□ -1.63
SCARNA13-201ENST00000516672 AVPR2P30518 371 aa4.89□□□□□ -1.63
SCARNA13-201ENST00000516672 TNIP1Q15025 636 aa4.89□□□□□ -1.63
SCARNA13-201ENST00000516672 AOC3Q16853 763 aa4.89□□□□□ -1.63
SCARNA13-201ENST00000516672 PRAMEF18Q5VWM3 479 aa4.89□□□□□ -1.63
SCARNA13-201ENST00000516672 BADQ92934 168 aa4.89□□□□□ -1.63
SCARNA13-201ENST00000516672 LTV1Q96GA3 475 aaPredicted RBP4.89□□□□□ -1.63
SCARNA13-201ENST00000516672 WNK4Q96J92 1243 aa4.89□□□□□ -1.63
SCARNA13-201ENST00000516672 PBX4Q9BYU1 374 aa4.89□□□□□ -1.63
SCARNA13-201ENST00000516672 NUP155O75694 1391 aa4.89□□□□□ -1.63
SCARNA13-201ENST00000516672 SPTBN2O15020 2390 aa4.89□□□□□ -1.63
SCARNA13-201ENST00000516672 SRRM3A6NNA2 597 aaPredicted RBP4.88□□□□□ -1.63
SCARNA13-201ENST00000516672 GALR2O43603 387 aaPredicted RBP4.88□□□□□ -1.63
SCARNA13-201ENST00000516672 PLA2G2AP14555 144 aa4.88□□□□□ -1.63
SCARNA13-201ENST00000516672 ELNP15502 786 aa4.88□□□□□ -1.63
SCARNA13-201ENST00000516672 NPR1P16066 1061 aa4.88□□□□□ -1.63
SCARNA13-201ENST00000516672 PSMC4P43686 418 aa4.88□□□□□ -1.63
SCARNA13-201ENST00000516672 PRKCZQ05513 592 aa4.88□□□□□ -1.63
SCARNA13-201ENST00000516672 NBPF9Q3BBW0 867 aa4.88□□□□□ -1.63
SCARNA13-201ENST00000516672 ANGEL2Q5VTE6 544 aaKnown RBP4.88□□□□□ -1.63
SCARNA13-201ENST00000516672 CCDC129Q6ZRS4 1044 aa4.88□□□□□ -1.63
SCARNA13-201ENST00000516672 CRIPAKQ8N1N5 446 aa4.88□□□□□ -1.63
SCARNA13-201ENST00000516672 KIF12Q96FN5 646 aa4.88□□□□□ -1.63
SCARNA13-201ENST00000516672 XRN2Q9H0D6 950 aaKnown RBP eCLIP4.88□□□□□ -1.63
SCARNA13-201ENST00000516672 NARFQ9UHQ1 456 aa4.88□□□□□ -1.63
SCARNA13-201ENST00000516672 MUTYHQ9UIF7 546 aa4.88□□□□□ -1.63
SCARNA13-201ENST00000516672 SCAF8Q9UPN6 1271 aaKnown RBP4.88□□□□□ -1.63
SCARNA13-201ENST00000516672 C2CD3Q4AC94 2353 aa4.87□□□□□ -1.63
SCARNA13-201ENST00000516672 CHD9Q3L8U1 2897 aa4.87□□□□□ -1.63
SCARNA13-201ENST00000516672 KALRNO60229 2985 aa4.87□□□□□ -1.63
SCARNA13-201ENST00000516672 TESPA1A2RU30 521 aaPredicted RBP4.87□□□□□ -1.63
SCARNA13-201ENST00000516672 CYP27B1O15528 508 aa4.87□□□□□ -1.63
SCARNA13-201ENST00000516672 ADCY3O60266 1144 aa4.87□□□□□ -1.63
SCARNA13-201ENST00000516672 COL6A1P12109 1028 aa4.87□□□□□ -1.63
SCARNA13-201ENST00000516672 SDHBP21912 280 aa4.87□□□□□ -1.63
SCARNA13-201ENST00000516672 KIF4BQ2VIQ3 1234 aa4.87□□□□□ -1.63
SCARNA13-201ENST00000516672 NBPF20Q3BBV1 942 aa4.87□□□□□ -1.63
SCARNA13-201ENST00000516672 KRTAP21-3Q3LHN1 58 aa4.87□□□□□ -1.63
SCARNA13-201ENST00000516672 TRIM67Q6ZTA4 783 aa4.87□□□□□ -1.63
SCARNA13-201ENST00000516672 ARMC9Q7Z3E5 817 aa4.87□□□□□ -1.63
SCARNA13-201ENST00000516672 KCNG4Q8TDN1 519 aa4.87□□□□□ -1.63
SCARNA13-201ENST00000516672 EDAQ92838 391 aa4.87□□□□□ -1.63
SCARNA13-201ENST00000516672 SLC10A4Q96EP9 437 aa4.87□□□□□ -1.63
SCARNA13-201ENST00000516672 BBC3Q96PG8 261 aaPredicted RBP4.87□□□□□ -1.63
SCARNA13-201ENST00000516672 MTCH2Q9Y6C9 303 aa4.87□□□□□ -1.63
SCARNA13-201ENST00000516672 TAF1P21675 1872 aa4.87□□□□□ -1.63
SCARNA13-201ENST00000516672 TECTAO75443 2155 aa4.87□□□□□ -1.63
SCARNA13-201ENST00000516672 GRXCR1A8MXD5 290 aa4.86□□□□□ -1.63
SCARNA13-201ENST00000516672 C1QTNF9BB2RNN3 333 aa4.86□□□□□ -1.63
SCARNA13-201ENST00000516672 NPHP1O15259 732 aa4.86□□□□□ -1.63
SCARNA13-201ENST00000516672 C1QTNF9P0C862 333 aa4.86□□□□□ -1.63
SCARNA13-201ENST00000516672 NUBP1P53384 320 aa4.86□□□□□ -1.63
SCARNA13-201ENST00000516672 ST5P78524 1137 aa4.86□□□□□ -1.63
SCARNA13-201ENST00000516672 C19orf57Q0VDD7 668 aa4.86□□□□□ -1.63
SCARNA13-201ENST00000516672 HERC4Q5GLZ8 1057 aaPredicted RBP4.86□□□□□ -1.63
SCARNA13-201ENST00000516672 PPM1JQ5JR12 505 aa4.86□□□□□ -1.63
SCARNA13-201ENST00000516672 LDLRAD1Q5T700 205 aa4.86□□□□□ -1.63
SCARNA13-201ENST00000516672 KDF1Q8NAX2 398 aaPredicted RBP4.86□□□□□ -1.63
SCARNA13-201ENST00000516672 DPF2Q92785 391 aa4.86□□□□□ -1.63
SCARNA13-201ENST00000516672 HINFPQ9BQA5 517 aa4.86□□□□□ -1.63
SCARNA13-201ENST00000516672 TRAK1Q9UPV9 953 aa4.86□□□□□ -1.63
SCARNA13-201ENST00000516672 TRIOO75962 3097 aa4.86□□□□□ -1.63
SCARNA13-201ENST00000516672 CGNL1Q0VF96 1302 aa4.86□□□□□ -1.63
SCARNA13-201ENST00000516672 CNOT1A5YKK6 2376 aaKnown RBP4.86□□□□□ -1.63
SCARNA13-201ENST00000516672 MAST2Q6P0Q8 1798 aa4.86□□□□□ -1.63
SCARNA13-201ENST00000516672 PLXNA1Q9UIW2 1896 aa4.86□□□□□ -1.63
SCARNA13-201ENST00000516672 GTPBP6O43824 516 aaPredicted RBP4.85□□□□□ -1.63
SCARNA13-201ENST00000516672 TLR2O60603 784 aa4.85□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms