RNA–Protein interactions for RNA: ENST00000516595.1

SCARNA16.3-201, small Cajal body-specific RNA 16, humanhuman

BASIC

Gene SCARNA16, Length 184 nt, Biotype scaRNA, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARNA16.3-201ENST00000516595 SSFA2P28290 1259 aa2.9□□□□□ -1.95
SCARNA16.3-201ENST00000516595 TNNT2P45379 298 aaPredicted RBP2.9□□□□□ -1.95
SCARNA16.3-201ENST00000516595 SCNN1DP51172 638 aa2.9□□□□□ -1.95
SCARNA16.3-201ENST00000516595 RBM6P78332 1123 aaKnown RBP2.9□□□□□ -1.95
SCARNA16.3-201ENST00000516595 KCNA1Q09470 495 aa2.9□□□□□ -1.95
SCARNA16.3-201ENST00000516595 CLN3Q13286 438 aa2.9□□□□□ -1.95
SCARNA16.3-201ENST00000516595 AAMPQ13685 434 aa2.9□□□□□ -1.95
SCARNA16.3-201ENST00000516595 AMOTQ4VCS5 1084 aa2.9□□□□□ -1.95
SCARNA16.3-201ENST00000516595 GNASQ5JWF2 1037 aa2.9□□□□□ -1.95
SCARNA16.3-201ENST00000516595 NBPF6Q5VWK0 638 aa2.9□□□□□ -1.95
SCARNA16.3-201ENST00000516595 TOM1L2Q6ZVM7 507 aa2.9□□□□□ -1.95
SCARNA16.3-201ENST00000516595 Q6ZVU0 165 aa2.9□□□□□ -1.95
SCARNA16.3-201ENST00000516595 PRICKLE2Q7Z3G6 844 aa2.9□□□□□ -1.95
SCARNA16.3-201ENST00000516595 NGEFQ8N5V2 710 aa2.9□□□□□ -1.95
SCARNA16.3-201ENST00000516595 PNISRQ8TF01 805 aaKnown RBP2.9□□□□□ -1.95
SCARNA16.3-201ENST00000516595 CLP1Q92989 425 aaKnown RBP2.9□□□□□ -1.95
SCARNA16.3-201ENST00000516595 XAGE2Q96GT9 111 aa2.9□□□□□ -1.95
SCARNA16.3-201ENST00000516595 NBPF4Q96M43 638 aa2.9□□□□□ -1.95
SCARNA16.3-201ENST00000516595 INSM2Q96T92 566 aaPredicted RBP2.9□□□□□ -1.95
SCARNA16.3-201ENST00000516595 KRTAP4-6Q9BYQ5 205 aa2.9□□□□□ -1.95
SCARNA16.3-201ENST00000516595 TSPAN10Q9H1Z9 355 aaPredicted RBP2.9□□□□□ -1.95
SCARNA16.3-201ENST00000516595 PNNQ9H307 717 aaKnown RBP2.9□□□□□ -1.95
SCARNA16.3-201ENST00000516595 MRS2Q9HD23 443 aa2.9□□□□□ -1.95
SCARNA16.3-201ENST00000516595 NEUROD4Q9HD90 331 aa2.9□□□□□ -1.95
SCARNA16.3-201ENST00000516595 BIN2Q9UBW5 565 aaPredicted RBP2.9□□□□□ -1.95
SCARNA16.3-201ENST00000516595 HCN4Q9Y3Q4 1203 aa2.9□□□□□ -1.95
SCARNA16.3-201ENST00000516595 PARP3Q9Y6F1 533 aa2.9□□□□□ -1.95
SCARNA16.3-201ENST00000516595 RGS12O14924 1447 aa2.9□□□□□ -1.95
SCARNA16.3-201ENST00000516595 PCDH11XQ9BZA7 1347 aa2.9□□□□□ -1.95
SCARNA16.3-201ENST00000516595 PCDH11YQ9BZA8 1340 aa2.9□□□□□ -1.95
SCARNA16.3-201ENST00000516595 MRC1P22897 1456 aa2.9□□□□□ -1.95
SCARNA16.3-201ENST00000516595 M0R2N6 131 aa2.89□□□□□ -1.95
SCARNA16.3-201ENST00000516595 PPM1GO15355 546 aaPredicted RBP2.89□□□□□ -1.95
SCARNA16.3-201ENST00000516595 HTATSF1O43719 755 aaKnown RBP2.89□□□□□ -1.95
SCARNA16.3-201ENST00000516595 DGAT1O75907 488 aa2.89□□□□□ -1.95
SCARNA16.3-201ENST00000516595 DKK1O94907 266 aa2.89□□□□□ -1.95
SCARNA16.3-201ENST00000516595 IL2RAP01589 272 aa2.89□□□□□ -1.95
SCARNA16.3-201ENST00000516595 U2AF1L5P0DN76 240 aaPredicted RBP2.89□□□□□ -1.95
SCARNA16.3-201ENST00000516595 TATP17735 454 aaPredicted RBP2.89□□□□□ -1.95
SCARNA16.3-201ENST00000516595 SCNN1AP37088 669 aa2.89□□□□□ -1.95
SCARNA16.3-201ENST00000516595 PHKA2P46019 1235 aa2.89□□□□□ -1.95
SCARNA16.3-201ENST00000516595 EVA1CP58658 441 aa2.89□□□□□ -1.95
SCARNA16.3-201ENST00000516595 U2AF1Q01081 240 aaKnown RBP eCLIP2.89□□□□□ -1.95
SCARNA16.3-201ENST00000516595 WDR43Q15061 677 aaKnown RBP eCLIP2.89□□□□□ -1.95
SCARNA16.3-201ENST00000516595 SULT6B1Q6IMI4 303 aa2.89□□□□□ -1.95
SCARNA16.3-201ENST00000516595 MRPL14Q6P1L8 145 aaKnown RBP2.89□□□□□ -1.95
SCARNA16.3-201ENST00000516595 SLC9A9Q8IVB4 645 aa2.89□□□□□ -1.95
SCARNA16.3-201ENST00000516595 RAPGEF4Q8WZA2 1011 aa2.89□□□□□ -1.95
SCARNA16.3-201ENST00000516595 SLC4A9Q96Q91 983 aa2.89□□□□□ -1.95
SCARNA16.3-201ENST00000516595 PURBQ96QR8 312 aaKnown RBP2.89□□□□□ -1.95
SCARNA16.3-201ENST00000516595 PLEKHF1Q96S99 279 aa2.89□□□□□ -1.95
SCARNA16.3-201ENST00000516595 KLF16Q9BXK1 252 aaPredicted RBP2.89□□□□□ -1.95
SCARNA16.3-201ENST00000516595 NIFKQ9BYG3 293 aaKnown RBP2.89□□□□□ -1.95
SCARNA16.3-201ENST00000516595 QTRT2Q9H974 415 aaKnown RBP2.89□□□□□ -1.95
SCARNA16.3-201ENST00000516595 ANO2Q9NQ90 1003 aa2.89□□□□□ -1.95
SCARNA16.3-201ENST00000516595 STRN4Q9NRL3 753 aa2.89□□□□□ -1.95
SCARNA16.3-201ENST00000516595 NLRP2Q9NX02 1062 aa2.89□□□□□ -1.95
SCARNA16.3-201ENST00000516595 CXXC1Q9P0U4 656 aaPredicted RBP2.89□□□□□ -1.95
SCARNA16.3-201ENST00000516595 SCHIP1Q9P0W5 487 aaPredicted RBP2.89□□□□□ -1.95
SCARNA16.3-201ENST00000516595 RGS17Q9UGC6 210 aaPredicted RBP2.89□□□□□ -1.95
SCARNA16.3-201ENST00000516595 IVNS1ABPQ9Y6Y0 642 aa2.89□□□□□ -1.95
SCARNA16.3-201ENST00000516595 RGPD5Q99666 1765 aa2.89□□□□□ -1.95
SCARNA16.3-201ENST00000516595 CEMIPQ8WUJ3 1361 aa2.88□□□□□ -1.95
SCARNA16.3-201ENST00000516595 MAP3K5Q99683 1374 aa2.88□□□□□ -1.95
SCARNA16.3-201ENST00000516595 SHANK3Q9BYB0 1731 aa2.88□□□□□ -1.95
SCARNA16.3-201ENST00000516595 SERTM1A2A2V5 107 aa2.88□□□□□ -1.95
SCARNA16.3-201ENST00000516595 NRG2O14511 850 aaPredicted RBP2.88□□□□□ -1.95
SCARNA16.3-201ENST00000516595 U2SURPO15042 1029 aaKnown RBP2.88□□□□□ -1.95
SCARNA16.3-201ENST00000516595 PTCD1O75127 700 aaKnown RBP2.88□□□□□ -1.95
SCARNA16.3-201ENST00000516595 NEFMP07197 916 aa2.88□□□□□ -1.95
SCARNA16.3-201ENST00000516595 HSP90AB1P08238 724 aaKnown RBP2.88□□□□□ -1.95
SCARNA16.3-201ENST00000516595 BMP1P13497 986 aa2.88□□□□□ -1.95
SCARNA16.3-201ENST00000516595 PHKG2P15735 406 aa2.88□□□□□ -1.95
SCARNA16.3-201ENST00000516595 IGFBP4P22692 258 aa2.88□□□□□ -1.95
SCARNA16.3-201ENST00000516595 RXRBP28702 533 aa2.88□□□□□ -1.95
SCARNA16.3-201ENST00000516595 WEE1P30291 646 aa2.88□□□□□ -1.95
SCARNA16.3-201ENST00000516595 PRKAR2BP31323 418 aa2.88□□□□□ -1.95
SCARNA16.3-201ENST00000516595 NOS2P35228 1153 aa2.88□□□□□ -1.95
SCARNA16.3-201ENST00000516595 CTSOP43234 321 aaPredicted RBP2.88□□□□□ -1.95
SCARNA16.3-201ENST00000516595 LMOD3Q0VAK6 560 aa2.88□□□□□ -1.95
SCARNA16.3-201ENST00000516595 POU4F2Q12837 409 aa2.88□□□□□ -1.95
SCARNA16.3-201ENST00000516595 LAPTM4AQ15012 233 aa2.88□□□□□ -1.95
SCARNA16.3-201ENST00000516595 DDB1Q16531 1140 aa2.88□□□□□ -1.95
SCARNA16.3-201ENST00000516595 CCDC27Q2M243 656 aa2.88□□□□□ -1.95
SCARNA16.3-201ENST00000516595 CTC1Q2NKJ3 1217 aa2.88□□□□□ -1.95
SCARNA16.3-201ENST00000516595 CCDC184Q52MB2 194 aa2.88□□□□□ -1.95
SCARNA16.3-201ENST00000516595 PLEKHO1Q53GL0 409 aaPredicted RBP2.88□□□□□ -1.95
SCARNA16.3-201ENST00000516595 ARSJQ5FYB0 599 aaPredicted RBP2.88□□□□□ -1.95
SCARNA16.3-201ENST00000516595 AKAP4Q5JQC9 854 aa2.88□□□□□ -1.95
SCARNA16.3-201ENST00000516595 TMCO4Q5TGY1 634 aa2.88□□□□□ -1.95
SCARNA16.3-201ENST00000516595 POTEAQ6S8J7 498 aa2.88□□□□□ -1.95
SCARNA16.3-201ENST00000516595 BICDL1Q6ZP65 573 aa2.88□□□□□ -1.95
SCARNA16.3-201ENST00000516595 LYSMD3Q7Z3D4 306 aa2.88□□□□□ -1.95
SCARNA16.3-201ENST00000516595 IFNL2Q8IZJ0 200 aa2.88□□□□□ -1.95
SCARNA16.3-201ENST00000516595 LINC00528Q8N1L1 170 aa2.88□□□□□ -1.95
SCARNA16.3-201ENST00000516595 MEIOBQ8N635 442 aa2.88□□□□□ -1.95
SCARNA16.3-201ENST00000516595 NBPF15Q8N660 670 aa2.88□□□□□ -1.95
SCARNA16.3-201ENST00000516595 KDF1Q8NAX2 398 aaPredicted RBP2.88□□□□□ -1.95
SCARNA16.3-201ENST00000516595 ZCRB1Q8TBF4 217 aaKnown RBP2.88□□□□□ -1.95
SCARNA16.3-201ENST00000516595 RUNDC1Q96C34 613 aa2.88□□□□□ -1.95
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms