RNA–Protein interactions for RNA: ENST00000515597.1

LINC01088-211, Transcript of long intergenic non-protein coding RNA 1088, humanhuman

TSL 1 (best)

Gene LINC01088, Length 664 nt, Biotype antisense RNA.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01088-211ENST00000515597 PMEPA1Q969W9 287 aa8.05□□□□□ -1.12
LINC01088-211ENST00000515597 NXPE3Q969Y0 559 aa8.05□□□□□ -1.12
LINC01088-211ENST00000515597 LATS2Q9NRM7 1088 aa8.05□□□□□ -1.12
LINC01088-211ENST00000515597 KIAA1324LA8MWY0 1029 aaPredicted RBP8.04□□□□□ -1.12
LINC01088-211ENST00000515597 VN1R5Q7Z5H4 357 aa8.04□□□□□ -1.12
LINC01088-211ENST00000515597 ASAP3Q8TDY4 903 aa8.04□□□□□ -1.12
LINC01088-211ENST00000515597 BSNDQ8WZ55 320 aa8.04□□□□□ -1.12
LINC01088-211ENST00000515597 USP26Q9BXU7 913 aa8.04□□□□□ -1.12
LINC01088-211ENST00000515597 ANO2Q9NQ90 1003 aa8.04□□□□□ -1.12
LINC01088-211ENST00000515597 SOX1O00570 391 aaPredicted RBP8.03□□□□□ -1.12
LINC01088-211ENST00000515597 FZD6O60353 706 aa8.03□□□□□ -1.12
LINC01088-211ENST00000515597 ARL4DP49703 201 aa8.03□□□□□ -1.12
LINC01088-211ENST00000515597 ZNF211Q13398 564 aaPredicted RBP8.03□□□□□ -1.12
LINC01088-211ENST00000515597 IKBKEQ14164 716 aa8.03□□□□□ -1.12
LINC01088-211ENST00000515597 PHLDB3Q6NSJ2 640 aa8.03□□□□□ -1.12
LINC01088-211ENST00000515597 CLEC10AQ8IUN9 316 aa8.03□□□□□ -1.12
LINC01088-211ENST00000515597 KRTAP4-12Q9BQ66 201 aa8.03□□□□□ -1.12
LINC01088-211ENST00000515597 PRR19A6NJB7 356 aa8.02□□□□□ -1.13
LINC01088-211ENST00000515597 GAS2O43903 313 aaKnown RBP8.02□□□□□ -1.13
LINC01088-211ENST00000515597 ADAMTS4O75173 837 aa8.02□□□□□ -1.13
LINC01088-211ENST00000515597 ABL1P00519 1130 aa8.02□□□□□ -1.13
LINC01088-211ENST00000515597 EDN3P14138 238 aa8.02□□□□□ -1.13
LINC01088-211ENST00000515597 NPR3P17342 541 aa8.02□□□□□ -1.13
LINC01088-211ENST00000515597 SHKBP1Q8TBC3 707 aa8.02□□□□□ -1.13
LINC01088-211ENST00000515597 FAM83CQ9BQN1 747 aa8.02□□□□□ -1.13
LINC01088-211ENST00000515597 CCDC87Q9NVE4 849 aa8.02□□□□□ -1.13
LINC01088-211ENST00000515597 PPP1R15AO75807 674 aaPredicted RBP8.01□□□□□ -1.13
LINC01088-211ENST00000515597 FAM13AO94988 1023 aa8.01□□□□□ -1.13
LINC01088-211ENST00000515597 SGO2Q562F6 1265 aa8.01□□□□□ -1.13
LINC01088-211ENST00000515597 OAS3Q9Y6K5 1087 aaKnown RBP8.01□□□□□ -1.13
LINC01088-211ENST00000515597 LOC100289279A0A1B0GTE1 492 aa8□□□□□ -1.13
LINC01088-211ENST00000515597 METTL12A8MUP2 240 aa8□□□□□ -1.13
LINC01088-211ENST00000515597 DLGAP3O95886 979 aa8□□□□□ -1.13
LINC01088-211ENST00000515597 POLR3DP05423 398 aaPredicted RBP8□□□□□ -1.13
LINC01088-211ENST00000515597 SPINK2P20155 84 aa8□□□□□ -1.13
LINC01088-211ENST00000515597 GRIK1P39086 918 aa8□□□□□ -1.13
LINC01088-211ENST00000515597 PEAR1Q5VY43 1037 aaPredicted RBP8□□□□□ -1.13
LINC01088-211ENST00000515597 ERICH6Q7L0X2 663 aa8□□□□□ -1.13
LINC01088-211ENST00000515597 KRTAP1-3Q8IUG1 177 aa8□□□□□ -1.13
LINC01088-211ENST00000515597 MFSD14AQ96MC6 490 aa8□□□□□ -1.13
LINC01088-211ENST00000515597 BHLHE41Q9C0J9 482 aaPredicted RBP8□□□□□ -1.13
LINC01088-211ENST00000515597 AMOTL2Q9Y2J4 779 aa8□□□□□ -1.13
LINC01088-211ENST00000515597 WDR64B1ANS9 1081 aa7.99□□□□□ -1.13
LINC01088-211ENST00000515597 ESRRAP11474 423 aaPredicted RBP7.99□□□□□ -1.13
LINC01088-211ENST00000515597 MAP4P27816 1152 aaKnown RBP7.99□□□□□ -1.13
LINC01088-211ENST00000515597 USP5P45974 858 aa7.99□□□□□ -1.13
LINC01088-211ENST00000515597 GP2P55259 537 aaKnown RBP7.99□□□□□ -1.13
LINC01088-211ENST00000515597 EHHADHQ08426 723 aa7.99□□□□□ -1.13
LINC01088-211ENST00000515597 NUTM2GQ5VZR2 741 aa7.99□□□□□ -1.13
LINC01088-211ENST00000515597 GJD3Q8N144 294 aa7.99□□□□□ -1.13
LINC01088-211ENST00000515597 TMPRSS13Q9BYE2 586 aa7.99□□□□□ -1.13
LINC01088-211ENST00000515597 HIF3AQ9Y2N7 669 aa7.99□□□□□ -1.13
LINC01088-211ENST00000515597 MEGF11A6BM72 1044 aa7.98□□□□□ -1.13
LINC01088-211ENST00000515597 RXRBP28702 533 aa7.98□□□□□ -1.13
LINC01088-211ENST00000515597 FKBP4Q02790 459 aaKnown RBP eCLIP7.98□□□□□ -1.13
LINC01088-211ENST00000515597 SF3B2Q13435 895 aaKnown RBP7.98□□□□□ -1.13
LINC01088-211ENST00000515597 INTS5Q6P9B9 1019 aaKnown RBP7.98□□□□□ -1.13
LINC01088-211ENST00000515597 C12orf50Q8NA57 414 aaPredicted RBP7.98□□□□□ -1.13
LINC01088-211ENST00000515597 MTMR7Q9Y216 660 aa7.98□□□□□ -1.13
LINC01088-211ENST00000515597 IRAK1P51617 712 aa7.97□□□□□ -1.13
LINC01088-211ENST00000515597 GSTM4Q03013 218 aa7.97□□□□□ -1.13
LINC01088-211ENST00000515597 ZFYVE28Q9HCC9 887 aa7.97□□□□□ -1.13
LINC01088-211ENST00000515597 COL17A1Q9UMD9 1497 aaPredicted RBP7.97□□□□□ -1.13
LINC01088-211ENST00000515597 TIAF1O95411 115 aa7.96□□□□□ -1.14
LINC01088-211ENST00000515597 DRD2P14416 443 aa7.96□□□□□ -1.14
LINC01088-211ENST00000515597 HOXA10P31260 410 aaPredicted RBP7.96□□□□□ -1.14
LINC01088-211ENST00000515597 LCE3BQ5TA77 95 aa7.96□□□□□ -1.14
LINC01088-211ENST00000515597 DTX1Q86Y01 620 aa7.96□□□□□ -1.14
LINC01088-211ENST00000515597 FBXL6Q8N531 539 aa7.96□□□□□ -1.14
LINC01088-211ENST00000515597 SMG8Q8ND04 991 aaKnown RBP7.96□□□□□ -1.14
LINC01088-211ENST00000515597 SOX17Q9H6I2 414 aaPredicted RBP7.96□□□□□ -1.14
LINC01088-211ENST00000515597 SUGCTQ9HAC7 445 aa7.95□□□□□ -1.14
LINC01088-211ENST00000515597 CYP4F12Q9HCS2 524 aa7.95□□□□□ -1.14
LINC01088-211ENST00000515597 KRTAP19-1Q8IUB9 90 aa7.94□□□□□ -1.14
LINC01088-211ENST00000515597 SHISA5Q8N114 240 aa7.94□□□□□ -1.14
LINC01088-211ENST00000515597 FBLIM1Q8WUP2 373 aa7.94□□□□□ -1.14
LINC01088-211ENST00000515597 NRSN2Q9GZP1 204 aa7.94□□□□□ -1.14
LINC01088-211ENST00000515597 A0A1W2PP55 124 aa7.93□□□□□ -1.14
LINC01088-211ENST00000515597 F13BP05160 661 aa7.93□□□□□ -1.14
LINC01088-211ENST00000515597 GRIA4P48058 902 aa7.93□□□□□ -1.14
LINC01088-211ENST00000515597 PCDH1Q08174 1060 aa7.93□□□□□ -1.14
LINC01088-211ENST00000515597 SPRED3Q2MJR0 410 aa7.93□□□□□ -1.14
LINC01088-211ENST00000515597 CDPF1Q6NVV7 123 aa7.93□□□□□ -1.14
LINC01088-211ENST00000515597 C2CD4AQ8NCU7 369 aaPredicted RBP7.93□□□□□ -1.14
LINC01088-211ENST00000515597 PIM2Q9P1W9 311 aa7.93□□□□□ -1.14
LINC01088-211ENST00000515597 A0A096LPE4 126 aa7.92□□□□□ -1.14
LINC01088-211ENST00000515597 A0A1W2PPZ6 126 aa7.92□□□□□ -1.14
LINC01088-211ENST00000515597 CTSBP07858 339 aa7.92□□□□□ -1.14
LINC01088-211ENST00000515597 TAL1P17542 331 aaPredicted RBP7.92□□□□□ -1.14
LINC01088-211ENST00000515597 USP11P51784 963 aa7.92□□□□□ -1.14
LINC01088-211ENST00000515597 NFKBIBQ15653 356 aa7.92□□□□□ -1.14
LINC01088-211ENST00000515597 EXOSC6Q5RKV6 272 aaKnown RBP7.92□□□□□ -1.14
LINC01088-211ENST00000515597 USPL1Q5W0Q7 1092 aa7.92□□□□□ -1.14
LINC01088-211ENST00000515597 GALNT12Q8IXK2 581 aa7.92□□□□□ -1.14
LINC01088-211ENST00000515597 TCF12Q99081 682 aa7.92□□□□□ -1.14
LINC01088-211ENST00000515597 LIN7BQ9HAP6 207 aa7.92□□□□□ -1.14
LINC01088-211ENST00000515597 ATG3Q9NT62 314 aa7.92□□□□□ -1.14
LINC01088-211ENST00000515597 FAM95CA0A1B0GW59 222 aa7.91□□□□□ -1.14
LINC01088-211ENST00000515597 H3BRB1 525 aa7.91□□□□□ -1.14
LINC01088-211ENST00000515597 PAX4O43316 350 aa7.91□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 71.1 ms