RNA–Protein interactions for RNA: ENST00000515420.1

CLCN3-210, Transcript of chloride voltage-gated channel 3, humanhuman

TSL 3

Gene CLCN3, Length 735 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN3-210ENST00000515420 RBM26Q5T8P6 1007 aaKnown RBP15.89■□□□□ 0.13
CLCN3-210ENST00000515420 KRT26Q7Z3Y9 468 aa15.89■□□□□ 0.13
CLCN3-210ENST00000515420 ITPRIPQ8IWB1 547 aa15.89■□□□□ 0.13
CLCN3-210ENST00000515420 MXD3Q9BW11 206 aa15.89■□□□□ 0.13
CLCN3-210ENST00000515420 SIL1Q9H173 461 aa15.89■□□□□ 0.13
CLCN3-210ENST00000515420 GGA3Q9NZ52 723 aa15.89■□□□□ 0.13
CLCN3-210ENST00000515420 RCAN3Q9UKA8 241 aa15.89■□□□□ 0.13
CLCN3-210ENST00000515420 RASSF10A6NK89 507 aa15.88■□□□□ 0.13
CLCN3-210ENST00000515420 TRAF5O00463 557 aa15.88■□□□□ 0.13
CLCN3-210ENST00000515420 ZBTB7BO15156 539 aaPredicted RBP15.88■□□□□ 0.13
CLCN3-210ENST00000515420 ZBTB22O15209 634 aa15.88■□□□□ 0.13
CLCN3-210ENST00000515420 SCARF1Q14162 830 aa15.88■□□□□ 0.13
CLCN3-210ENST00000515420 CERS5Q8N5B7 392 aa15.88■□□□□ 0.13
CLCN3-210ENST00000515420 PA2G4Q9UQ80 394 aaKnown RBP15.88■□□□□ 0.13
CLCN3-210ENST00000515420 KIAA0825Q8IV33 1275 aa15.87■□□□□ 0.13
CLCN3-210ENST00000515420 SULF1Q8IWU6 871 aa15.87■□□□□ 0.13
CLCN3-210ENST00000515420 MTMR14Q8NCE2 650 aa15.87■□□□□ 0.13
CLCN3-210ENST00000515420 TBC1D22AQ8WUA7 517 aa15.87■□□□□ 0.13
CLCN3-210ENST00000515420 ZBED3Q96IU2 234 aaPredicted RBP15.87■□□□□ 0.13
CLCN3-210ENST00000515420 WNT10BO00744 389 aa15.86■□□□□ 0.13
CLCN3-210ENST00000515420 ATP2B3Q16720 1220 aa15.86■□□□□ 0.13
CLCN3-210ENST00000515420 MFSD14BQ5SR56 506 aa15.86■□□□□ 0.13
CLCN3-210ENST00000515420 CST9Q5W186 159 aa15.86■□□□□ 0.13
CLCN3-210ENST00000515420 HHIPL1Q96JK4 782 aa15.86■□□□□ 0.13
CLCN3-210ENST00000515420 TLL2Q9Y6L7 1015 aa15.86■□□□□ 0.13
CLCN3-210ENST00000515420 PNMA6EA0A0J9YXQ4 647 aa15.85■□□□□ 0.13
CLCN3-210ENST00000515420 CELF2O95319 508 aaKnown RBP15.85■□□□□ 0.13
CLCN3-210ENST00000515420 BCAMP50895 628 aa15.85■□□□□ 0.13
CLCN3-210ENST00000515420 FMR1Q06787 632 aaKnown RBP eCLIP15.85■□□□□ 0.137e-6■■□□□ 12.8
CLCN3-210ENST00000515420 POLA2Q14181 598 aa15.85■□□□□ 0.13
CLCN3-210ENST00000515420 ANGEL2Q5VTE6 544 aaKnown RBP15.85■□□□□ 0.13
CLCN3-210ENST00000515420 USP48Q86UV5 1035 aa15.85■□□□□ 0.13
CLCN3-210ENST00000515420 SSH3Q8TE77 659 aa15.85■□□□□ 0.13
CLCN3-210ENST00000515420 AKAP2Q9Y2D5 859 aa15.85■□□□□ 0.13
CLCN3-210ENST00000515420 COL1A1P02452 1464 aaPredicted RBP15.84■□□□□ 0.13
CLCN3-210ENST00000515420 FRAT2O75474 233 aaPredicted RBP15.84■□□□□ 0.13
CLCN3-210ENST00000515420 ATP8B2P98198 1209 aa15.84■□□□□ 0.13
CLCN3-210ENST00000515420 DEFB115Q30KQ5 88 aa15.84■□□□□ 0.13
CLCN3-210ENST00000515420 NBPF9Q3BBW0 867 aa15.84■□□□□ 0.13
CLCN3-210ENST00000515420 GOLGA6L2Q8N9W4 650 aaPredicted RBP15.84■□□□□ 0.13
CLCN3-210ENST00000515420 PANK1Q8TE04 598 aa15.84■□□□□ 0.13
CLCN3-210ENST00000515420 CHMP4BQ9H444 224 aaKnown RBP15.84■□□□□ 0.13
CLCN3-210ENST00000515420 ABT1Q9ULW3 272 aaKnown RBP15.84■□□□□ 0.13
CLCN3-210ENST00000515420 DDX19BQ9UMR2 479 aa15.84■□□□□ 0.13
CLCN3-210ENST00000515420 SUGT1Q9Y2Z0 365 aa15.84■□□□□ 0.13
CLCN3-210ENST00000515420 ASTN2O75129 1339 aaPredicted RBP15.84■□□□□ 0.13
CLCN3-210ENST00000515420 THSD7BQ9C0I4 1608 aa15.83■□□□□ 0.13
CLCN3-210ENST00000515420 SEMA3EO15041 775 aa15.83■□□□□ 0.12
CLCN3-210ENST00000515420 MVPQ14764 893 aaKnown RBP15.83■□□□□ 0.12
CLCN3-210ENST00000515420 DLGAP5Q15398 846 aa15.83■□□□□ 0.12
CLCN3-210ENST00000515420 SAPCD2Q86UD0 394 aa15.83■□□□□ 0.12
CLCN3-210ENST00000515420 GNL3LQ9NVN8 582 aaKnown RBP15.83■□□□□ 0.12
CLCN3-210ENST00000515420 MKRN1Q9UHC7 482 aaKnown RBP15.83■□□□□ 0.12
CLCN3-210ENST00000515420 SERPINA10Q9UK55 444 aa15.83■□□□□ 0.12
CLCN3-210ENST00000515420 PCNTO95613 3336 aa15.82■□□□□ 0.12
CLCN3-210ENST00000515420 ADM5C9JUS6 153 aa15.82■□□□□ 0.12
CLCN3-210ENST00000515420 HDLBPQ00341 1268 aaKnown RBP15.82■□□□□ 0.12
CLCN3-210ENST00000515420 G3BP1Q13283 466 aaKnown RBP eCLIP15.82■□□□□ 0.12
CLCN3-210ENST00000515420 PDE3AQ14432 1141 aa15.82■□□□□ 0.12
CLCN3-210ENST00000515420 APOBEC3FQ8IUX4 373 aaKnown RBP15.82■□□□□ 0.12
CLCN3-210ENST00000515420 WDR66Q8TBY9 1149 aa15.82■□□□□ 0.12
CLCN3-210ENST00000515420 JAG2Q9Y219 1238 aa15.82■□□□□ 0.12
CLCN3-210ENST00000515420 MAST3O60307 1309 aa15.82■□□□□ 0.12
CLCN3-210ENST00000515420 SPDYE2BA6NHP3 402 aa15.81■□□□□ 0.12
CLCN3-210ENST00000515420 MYO1BO43795 1136 aa15.81■□□□□ 0.12
CLCN3-210ENST00000515420 SPDYE6P0CI01 402 aa15.81■□□□□ 0.12
CLCN3-210ENST00000515420 ECE1P42892 770 aa15.81■□□□□ 0.12
CLCN3-210ENST00000515420 FKBP1BP68106 108 aa15.81■□□□□ 0.12
CLCN3-210ENST00000515420 TFCP2Q12800 502 aa15.81■□□□□ 0.12
CLCN3-210ENST00000515420 PDS5AQ29RF7 1337 aaKnown RBP15.81■□□□□ 0.12
CLCN3-210ENST00000515420 CFAP100Q494V2 611 aa15.81■□□□□ 0.12
CLCN3-210ENST00000515420 MRIQ9BWK5 157 aa15.81■□□□□ 0.12
CLCN3-210ENST00000515420 PAPPA2Q9BXP8 1791 aa15.81■□□□□ 0.12
CLCN3-210ENST00000515420 GBA2Q9HCG7 927 aaPredicted RBP15.81■□□□□ 0.12
CLCN3-210ENST00000515420 TTF2Q9UNY4 1162 aaKnown RBP15.81■□□□□ 0.12
CLCN3-210ENST00000515420 IQSEC3Q9UPP2 1182 aaPredicted RBP15.81■□□□□ 0.12
CLCN3-210ENST00000515420 SALL1Q9NSC2 1324 aa15.8■□□□□ 0.12
CLCN3-210ENST00000515420 A0A1B0GUL7 405 aa15.8■□□□□ 0.12
CLCN3-210ENST00000515420 F8W031 263 aaPredicted RBP15.8■□□□□ 0.12
CLCN3-210ENST00000515420 VEGFBP49765 207 aa15.8■□□□□ 0.12
CLCN3-210ENST00000515420 CHAF1AQ13111 956 aaPredicted RBP15.8■□□□□ 0.12
CLCN3-210ENST00000515420 CEP85Q6P2H3 762 aa15.8■□□□□ 0.12
CLCN3-210ENST00000515420 C2orf69Q8N8R5 385 aa15.8■□□□□ 0.12
CLCN3-210ENST00000515420 CDCA5Q96FF9 252 aa15.8■□□□□ 0.12
CLCN3-210ENST00000515420 C1orf115Q9H7X2 142 aa15.8■□□□□ 0.12
CLCN3-210ENST00000515420 ZNF408Q9H9D4 720 aa15.8■□□□□ 0.12
CLCN3-210ENST00000515420 GPR108Q9NPR9 543 aa15.8■□□□□ 0.12
CLCN3-210ENST00000515420 DENND2AQ9ULE3 1009 aa15.8■□□□□ 0.12
CLCN3-210ENST00000515420 NOP58Q9Y2X3 529 aaKnown RBP15.8■□□□□ 0.12
CLCN3-210ENST00000515420 PPP2R3BQ9Y5P8 575 aa15.8■□□□□ 0.12
CLCN3-210ENST00000515420 CCDC102BQ68D86 513 aa15.79■□□□□ 0.12
CLCN3-210ENST00000515420 WDR33Q9C0J8 1336 aaKnown RBP15.78■□□□□ 0.12
CLCN3-210ENST00000515420 PHKA1P46020 1223 aa15.78■□□□□ 0.12
CLCN3-210ENST00000515420 RBM5P52756 815 aaKnown RBP eCLIP15.78■□□□□ 0.12
CLCN3-210ENST00000515420 XAGE2Q96GT9 111 aa15.78■□□□□ 0.12
CLCN3-210ENST00000515420 CAPNS2Q96L46 248 aa15.78■□□□□ 0.12
CLCN3-210ENST00000515420 ZBTB40Q9NUA8 1239 aa15.78■□□□□ 0.12
CLCN3-210ENST00000515420 COG6Q9Y2V7 657 aa15.78■□□□□ 0.12
CLCN3-210ENST00000515420 SURF6O75683 361 aaKnown RBP15.77■□□□□ 0.12
CLCN3-210ENST00000515420 ADORA1P30542 326 aa15.77■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms