RNA–Protein interactions for RNA: ENST00000514909.1

LDHBP3-201, Transcript of lactate dehydrogenase B pseudogene 3, humanhuman

BASIC

Gene LDHBP3, Length 822 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDHBP3-201ENST00000514909 FAM160A1Q05DH4 1040 aa11.18□□□□□ -0.62
LDHBP3-201ENST00000514909 APOBRQ0VD83 1088 aa11.18□□□□□ -0.62
LDHBP3-201ENST00000514909 GRIN2CQ14957 1233 aa11.18□□□□□ -0.62
LDHBP3-201ENST00000514909 TCEAL1Q15170 157 aa11.18□□□□□ -0.62
LDHBP3-201ENST00000514909 TTBK2Q6IQ55 1244 aa11.18□□□□□ -0.62
LDHBP3-201ENST00000514909 DHX32Q7L7V1 743 aaKnown RBP11.18□□□□□ -0.62
LDHBP3-201ENST00000514909 GOLM1Q8NBJ4 401 aa11.18□□□□□ -0.62
LDHBP3-201ENST00000514909 KIFC2Q96AC6 838 aa11.18□□□□□ -0.62
LDHBP3-201ENST00000514909 ZFP42Q96MM3 310 aa11.18□□□□□ -0.62
LDHBP3-201ENST00000514909 TRIM55Q9BYV6 548 aa11.18□□□□□ -0.62
LDHBP3-201ENST00000514909 NUCKS1Q9H1E3 243 aaKnown RBP11.18□□□□□ -0.62
LDHBP3-201ENST00000514909 STRN4Q9NRL3 753 aa11.18□□□□□ -0.62
LDHBP3-201ENST00000514909 UBP1Q9NZI7 540 aa11.18□□□□□ -0.62
LDHBP3-201ENST00000514909 H7C1W4 665 aa11.17□□□□□ -0.62
LDHBP3-201ENST00000514909 U2SURPO15042 1029 aaKnown RBP11.17□□□□□ -0.62
LDHBP3-201ENST00000514909 ACPPP15309 386 aa11.17□□□□□ -0.62
LDHBP3-201ENST00000514909 TRIM42Q8IWZ5 723 aa11.17□□□□□ -0.62
LDHBP3-201ENST00000514909 NKD1Q969G9 470 aa11.17□□□□□ -0.62
LDHBP3-201ENST00000514909 NXPE3Q969Y0 559 aa11.17□□□□□ -0.62
LDHBP3-201ENST00000514909 SPACA7Q96KW9 195 aa11.17□□□□□ -0.62
LDHBP3-201ENST00000514909 SRRTQ9BXP5 876 aaKnown RBP11.17□□□□□ -0.62
LDHBP3-201ENST00000514909 ZNF576Q9H609 170 aa11.17□□□□□ -0.62
LDHBP3-201ENST00000514909 SEC31BQ9NQW1 1179 aa11.17□□□□□ -0.62
LDHBP3-201ENST00000514909 MRPL42Q9Y6G3 142 aaKnown RBP11.17□□□□□ -0.62
LDHBP3-201ENST00000514909 A0A096LPE4 126 aa11.16□□□□□ -0.62
LDHBP3-201ENST00000514909 A0A1W2PPZ6 126 aa11.16□□□□□ -0.62
LDHBP3-201ENST00000514909 CLSTN1O94985 981 aa11.16□□□□□ -0.62
LDHBP3-201ENST00000514909 TFE3P19532 575 aaPredicted RBP11.16□□□□□ -0.62
LDHBP3-201ENST00000514909 TNNI3KQ59H18 835 aa11.16□□□□□ -0.62
LDHBP3-201ENST00000514909 CPLX3Q8WVH0 158 aa11.16□□□□□ -0.62
LDHBP3-201ENST00000514909 MRVI1Q9Y6F6 885 aa11.16□□□□□ -0.62
LDHBP3-201ENST00000514909 CRKP46108 304 aa11.15□□□□□ -0.62
LDHBP3-201ENST00000514909 GPLD1P80108 840 aa11.15□□□□□ -0.62
LDHBP3-201ENST00000514909 INSM1Q01101 510 aaPredicted RBP11.15□□□□□ -0.62
LDHBP3-201ENST00000514909 SPRED3Q2MJR0 410 aa11.15□□□□□ -0.62
LDHBP3-201ENST00000514909 GMCL1Q96IK5 515 aa11.15□□□□□ -0.62
LDHBP3-201ENST00000514909 SHDQ96IW2 340 aa11.15□□□□□ -0.62
LDHBP3-201ENST00000514909 RASA3Q14644 834 aa11.14□□□□□ -0.63
LDHBP3-201ENST00000514909 FAM182BQ5T319 152 aa11.14□□□□□ -0.63
LDHBP3-201ENST00000514909 TRPM4Q8TD43 1214 aa11.14□□□□□ -0.63
LDHBP3-201ENST00000514909 SRPK1Q96SB4 655 aaKnown RBP11.14□□□□□ -0.63
LDHBP3-201ENST00000514909 HCN2Q9UL51 889 aa11.14□□□□□ -0.63
LDHBP3-201ENST00000514909 PDE2AO00408 941 aaPredicted RBP11.13□□□□□ -0.63
LDHBP3-201ENST00000514909 BNIP3LO60238 219 aa11.13□□□□□ -0.63
LDHBP3-201ENST00000514909 NEUROD1Q13562 356 aa11.13□□□□□ -0.63
LDHBP3-201ENST00000514909 RIPOR1Q6ZS17 1223 aa11.13□□□□□ -0.63
LDHBP3-201ENST00000514909 HNRNPLLQ8WVV9 542 aaKnown RBP11.13□□□□□ -0.63
LDHBP3-201ENST00000514909 DEPDC7Q96QD5 511 aa11.13□□□□□ -0.63
LDHBP3-201ENST00000514909 SLC30A3Q99726 388 aa11.13□□□□□ -0.63
LDHBP3-201ENST00000514909 SNTG2Q9NY99 539 aa11.13□□□□□ -0.63
LDHBP3-201ENST00000514909 R3HCC1Q9Y3T6 440 aaKnown RBP11.13□□□□□ -0.63
LDHBP3-201ENST00000514909 SLC35F4A4IF30 521 aa11.12□□□□□ -0.63
LDHBP3-201ENST00000514909 METTL12A8MUP2 240 aa11.12□□□□□ -0.63
LDHBP3-201ENST00000514909 FAAP100Q0VG06 881 aa11.12□□□□□ -0.63
LDHBP3-201ENST00000514909 TRIM22Q8IYM9 498 aa11.12□□□□□ -0.63
LDHBP3-201ENST00000514909 BHMTQ93088 406 aa11.12□□□□□ -0.63
LDHBP3-201ENST00000514909 ANAPC16Q96DE5 110 aa11.12□□□□□ -0.63
LDHBP3-201ENST00000514909 NSUN5Q96P11 429 aaKnown RBP11.12□□□□□ -0.63
LDHBP3-201ENST00000514909 PBX4Q9BYU1 374 aa11.12□□□□□ -0.63
LDHBP3-201ENST00000514909 BRINP2Q9C0B6 783 aa11.12□□□□□ -0.63
LDHBP3-201ENST00000514909 TMEM39AQ9NV64 488 aa11.12□□□□□ -0.63
LDHBP3-201ENST00000514909 ATXN7L1Q9ULK2 861 aaPredicted RBP11.12□□□□□ -0.63
LDHBP3-201ENST00000514909 SAMM50Q9Y512 469 aa11.12□□□□□ -0.63
LDHBP3-201ENST00000514909 MAN1A2O60476 641 aa11.11□□□□□ -0.63
LDHBP3-201ENST00000514909 PAGE1O75459 146 aa11.11□□□□□ -0.63
LDHBP3-201ENST00000514909 MPP2Q14168 576 aa11.11□□□□□ -0.63
LDHBP3-201ENST00000514909 PCSK7Q16549 785 aa11.11□□□□□ -0.63
LDHBP3-201ENST00000514909 OR6P1Q8NGX9 317 aa11.11□□□□□ -0.63
LDHBP3-201ENST00000514909 GATAD2BQ8WXI9 593 aa11.11□□□□□ -0.63
LDHBP3-201ENST00000514909 HHIPQ96QV1 700 aa11.11□□□□□ -0.63
LDHBP3-201ENST00000514909 GPN3Q9UHW5 284 aaPredicted RBP11.11□□□□□ -0.63
LDHBP3-201ENST00000514909 MSRB2Q9Y3D2 182 aa11.11□□□□□ -0.63
LDHBP3-201ENST00000514909 LOC102724428A0A0B4J2F2 783 aa11.1□□□□□ -0.63
LDHBP3-201ENST00000514909 TRPA1O75762 1119 aa11.1□□□□□ -0.63
LDHBP3-201ENST00000514909 SIK1P57059 783 aa11.1□□□□□ -0.63
LDHBP3-201ENST00000514909 PPP2R3AQ06190 1150 aa11.1□□□□□ -0.63
LDHBP3-201ENST00000514909 RNPC3Q96LT9 517 aaKnown RBP11.1□□□□□ -0.63
LDHBP3-201ENST00000514909 FAM221AA4D161 298 aa11.09□□□□□ -0.63
LDHBP3-201ENST00000514909 F13A1P00488 732 aa11.09□□□□□ -0.63
LDHBP3-201ENST00000514909 GIPRP48546 466 aa11.09□□□□□ -0.63
LDHBP3-201ENST00000514909 SEZ6Q53EL9 994 aa11.09□□□□□ -0.63
LDHBP3-201ENST00000514909 DIEXFQ68CQ4 756 aaKnown RBP11.09□□□□□ -0.63
LDHBP3-201ENST00000514909 CCDC113Q9H0I3 377 aa11.09□□□□□ -0.63
LDHBP3-201ENST00000514909 MIR1-1HGQ9H1L0 117 aa11.09□□□□□ -0.63
LDHBP3-201ENST00000514909 CYP8B1Q9UNU6 501 aa11.09□□□□□ -0.63
LDHBP3-201ENST00000514909 SMAD7O15105 426 aaKnown RBP11.08□□□□□ -0.64
LDHBP3-201ENST00000514909 LMNB1P20700 586 aa11.08□□□□□ -0.64
LDHBP3-201ENST00000514909 EIF6P56537 245 aaKnown RBP11.08□□□□□ -0.64
LDHBP3-201ENST00000514909 PTSQ03393 145 aa11.08□□□□□ -0.64
LDHBP3-201ENST00000514909 DBN1Q16643 649 aa11.08□□□□□ -0.64
LDHBP3-201ENST00000514909 CWF19L2Q2TBE0 894 aaKnown RBP11.08□□□□□ -0.64
LDHBP3-201ENST00000514909 PLEKHG4Q58EX7 1191 aa11.08□□□□□ -0.64
LDHBP3-201ENST00000514909 SCARA3Q6AZY7 606 aa11.08□□□□□ -0.64
LDHBP3-201ENST00000514909 BNC2Q6ZN30 1099 aaPredicted RBP11.08□□□□□ -0.64
LDHBP3-201ENST00000514909 REXO1Q8N1G1 1221 aaKnown RBP11.08□□□□□ -0.64
LDHBP3-201ENST00000514909 ASAP3Q8TDY4 903 aa11.08□□□□□ -0.64
LDHBP3-201ENST00000514909 KCNB2Q92953 911 aa11.08□□□□□ -0.64
LDHBP3-201ENST00000514909 ABHD17AQ96GS6 310 aa11.08□□□□□ -0.64
LDHBP3-201ENST00000514909 RASSF4Q9H2L5 321 aa11.08□□□□□ -0.64
LDHBP3-201ENST00000514909 CLEC4MQ9H2X3 399 aaPredicted RBP11.08□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms