RNA–Protein interactions for RNA: ENST00000514536.5

USP46-209, Transcript of ubiquitin specific peptidase 46, humanhuman

TSL 2

Gene USP46, Length 1,589 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP46-209ENST00000514536 ADORA1P30542 326 aa17.24■□□□□ 0.35
USP46-209ENST00000514536 CHADLQ6NUI6 762 aa17.24■□□□□ 0.35
USP46-209ENST00000514536 NEUROD6Q96NK8 337 aa17.24■□□□□ 0.35
USP46-209ENST00000514536 EXOC6BQ9Y2D4 811 aa17.24■□□□□ 0.35
USP46-209ENST00000514536 USP17L8P0C7I0 530 aa17.23■□□□□ 0.35
USP46-209ENST00000514536 HIRAP54198 1017 aaPredicted RBP17.23■□□□□ 0.35
USP46-209ENST00000514536 HTRA3P83110 453 aa17.23■□□□□ 0.35
USP46-209ENST00000514536 TBC1D10BQ4KMP7 808 aaPredicted RBP17.23■□□□□ 0.35
USP46-209ENST00000514536 CERS5Q8N5B7 392 aa17.23■□□□□ 0.35
USP46-209ENST00000514536 TRPM4Q8TD43 1214 aa17.23■□□□□ 0.35
USP46-209ENST00000514536 MYO3BQ8WXR4 1341 aa17.23■□□□□ 0.35
USP46-209ENST00000514536 EGFRP00533 1210 aa17.23■□□□□ 0.35
USP46-209ENST00000514536 CHAF1AQ13111 956 aaPredicted RBP17.23■□□□□ 0.35
USP46-209ENST00000514536 XAGE2Q96GT9 111 aa17.23■□□□□ 0.35
USP46-209ENST00000514536 FAM205AQ6ZU69 1335 aa17.22■□□□□ 0.35
USP46-209ENST00000514536 PHKA1P46020 1223 aa17.22■□□□□ 0.35
USP46-209ENST00000514536 ZNF280AP59817 542 aaPredicted RBP17.22■□□□□ 0.35
USP46-209ENST00000514536 MAP1SQ66K74 1059 aaPredicted RBP17.22■□□□□ 0.35
USP46-209ENST00000514536 KIAA0825Q8IV33 1275 aa17.22■□□□□ 0.35
USP46-209ENST00000514536 FKBP1AP62942 108 aaKnown RBP17.21■□□□□ 0.35
USP46-209ENST00000514536 CCDC102BQ68D86 513 aa17.21■□□□□ 0.35
USP46-209ENST00000514536 OGFOD1Q8N543 542 aa17.21■□□□□ 0.35
USP46-209ENST00000514536 GNL3LQ9NVN8 582 aaKnown RBP17.21■□□□□ 0.35
USP46-209ENST00000514536 F8W031 263 aaPredicted RBP17.2■□□□□ 0.34
USP46-209ENST00000514536 APBB1O00213 710 aa17.2■□□□□ 0.34
USP46-209ENST00000514536 ZNF609O15014 1411 aa17.2■□□□□ 0.34
USP46-209ENST00000514536 KIF4BQ2VIQ3 1234 aa17.2■□□□□ 0.34
USP46-209ENST00000514536 HSP90AB4PQ58FF6 505 aa17.2■□□□□ 0.34
USP46-209ENST00000514536 TNNI3KQ59H18 835 aa17.2■□□□□ 0.34
USP46-209ENST00000514536 MFSD14BQ5SR56 506 aa17.2■□□□□ 0.34
USP46-209ENST00000514536 MYOZ2Q9NPC6 264 aa17.2■□□□□ 0.34
USP46-209ENST00000514536 GPR108Q9NPR9 543 aa17.2■□□□□ 0.34
USP46-209ENST00000514536 FPGT-TNNI3KV9GXZ4 949 aa17.2■□□□□ 0.34
USP46-209ENST00000514536 GORABQ5T7V8 394 aa17.19■□□□□ 0.34
USP46-209ENST00000514536 IFFO2Q5TF58 517 aa17.19■□□□□ 0.34
USP46-209ENST00000514536 ERC1Q8IUD2 1116 aa17.19■□□□□ 0.34
USP46-209ENST00000514536 CNTROBQ8N137 903 aa17.19■□□□□ 0.34
USP46-209ENST00000514536 HDAC9Q9UKV0 1011 aa17.19■□□□□ 0.34
USP46-209ENST00000514536 PCDHB15Q9Y5E8 787 aa17.19■□□□□ 0.34
USP46-209ENST00000514536 SCARF1Q14162 830 aa17.18■□□□□ 0.34
USP46-209ENST00000514536 RHPN1Q8TCX5 695 aa17.18■□□□□ 0.34
USP46-209ENST00000514536 ZC3H15Q8WU90 426 aaKnown RBP17.18■□□□□ 0.34
USP46-209ENST00000514536 TBC1D22AQ8WUA7 517 aa17.18■□□□□ 0.34
USP46-209ENST00000514536 KLRG1Q96E93 195 aa17.18■□□□□ 0.34
USP46-209ENST00000514536 PGAP2Q9UHJ9 254 aa17.18■□□□□ 0.34
USP46-209ENST00000514536 ITGBL1O95965 494 aaPredicted RBP17.17■□□□□ 0.34
USP46-209ENST00000514536 MMP14P50281 582 aa17.17■□□□□ 0.34
USP46-209ENST00000514536 GRIK5Q16478 980 aa17.17■□□□□ 0.34
USP46-209ENST00000514536 EAF2Q96CJ1 260 aaPredicted RBP17.17■□□□□ 0.34
USP46-209ENST00000514536 DBNDD2Q9BQY9 259 aa17.17■□□□□ 0.34
USP46-209ENST00000514536 CCDC8Q9H0W5 538 aaPredicted RBP17.17■□□□□ 0.34
USP46-209ENST00000514536 IL1RAPL2Q9NP60 686 aa17.17■□□□□ 0.34
USP46-209ENST00000514536 DENND2AQ9ULE3 1009 aa17.17■□□□□ 0.34
USP46-209ENST00000514536 PSME4Q14997 1843 aa17.16■□□□□ 0.34
USP46-209ENST00000514536 SEMA3EO15041 775 aa17.16■□□□□ 0.34
USP46-209ENST00000514536 RAB11FIP3O75154 756 aa17.16■□□□□ 0.34
USP46-209ENST00000514536 EXOC6Q8TAG9 804 aa17.16■□□□□ 0.34
USP46-209ENST00000514536 WDR66Q8TBY9 1149 aa17.16■□□□□ 0.34
USP46-209ENST00000514536 KIF1BPQ96EK5 621 aa17.16■□□□□ 0.34
USP46-209ENST00000514536 BCL11AQ9H165 835 aa17.16■□□□□ 0.34
USP46-209ENST00000514536 TTF2Q9UNY4 1162 aaKnown RBP17.16■□□□□ 0.34
USP46-209ENST00000514536 ASTN2O75129 1339 aaPredicted RBP17.16■□□□□ 0.34
USP46-209ENST00000514536 RASGRF1Q13972 1273 aa17.15■□□□□ 0.34
USP46-209ENST00000514536 NBPF9Q3BBW0 867 aa17.15■□□□□ 0.34
USP46-209ENST00000514536 WNT10BO00744 389 aa17.15■□□□□ 0.34
USP46-209ENST00000514536 DLGAP5Q15398 846 aa17.15■□□□□ 0.34
USP46-209ENST00000514536 AACSQ86V21 672 aa17.15■□□□□ 0.34
USP46-209ENST00000514536 JMYQ8N9B5 988 aa17.15■□□□□ 0.34
USP46-209ENST00000514536 TLR7Q9NYK1 1049 aaKnown RBP17.15■□□□□ 0.34
USP46-209ENST00000514536 DBNLQ9UJU6 430 aaKnown RBP17.15■□□□□ 0.34
USP46-209ENST00000514536 PCDHAC2Q9Y5I4 1007 aa17.15■□□□□ 0.34
USP46-209ENST00000514536 RBM5P52756 815 aaKnown RBP eCLIP17.14■□□□□ 0.33
USP46-209ENST00000514536 FMR1Q06787 632 aaKnown RBP eCLIP17.14■□□□□ 0.33
USP46-209ENST00000514536 CFAP100Q494V2 611 aa17.14■□□□□ 0.33
USP46-209ENST00000514536 CCDC158Q5M9N0 1113 aa17.14■□□□□ 0.33
USP46-209ENST00000514536 TTC39AQ5SRH9 613 aa17.14■□□□□ 0.33
USP46-209ENST00000514536 USP48Q86UV5 1035 aa17.14■□□□□ 0.33
USP46-209ENST00000514536 CLASRPQ8N2M8 674 aaKnown RBP17.14■□□□□ 0.33
USP46-209ENST00000514536 DCPSQ96C86 337 aaKnown RBP17.14■□□□□ 0.33
USP46-209ENST00000514536 GLIS2Q9BZE0 524 aaPredicted RBP17.14■□□□□ 0.33
USP46-209ENST00000514536 DCTPP1Q9H773 170 aa17.14■□□□□ 0.33
USP46-209ENST00000514536 GGA3Q9NZ52 723 aa17.14■□□□□ 0.33
USP46-209ENST00000514536 ADAMTSL1Q8N6G6 1762 aa17.14■□□□□ 0.33
USP46-209ENST00000514536 ZNF646O15015 1829 aaPredicted RBP17.13■□□□□ 0.33
USP46-209ENST00000514536 COL1A1P02452 1464 aaPredicted RBP17.13■□□□□ 0.33
USP46-209ENST00000514536 PASKQ96RG2 1323 aa17.13■□□□□ 0.33
USP46-209ENST00000514536 TRAF5O00463 557 aa17.13■□□□□ 0.33
USP46-209ENST00000514536 ZBTB22O15209 634 aa17.13■□□□□ 0.33
USP46-209ENST00000514536 UQCRFS1P1P0C7P4 283 aa17.13■□□□□ 0.33
USP46-209ENST00000514536 ARID4AP29374 1257 aaPredicted RBP17.13■□□□□ 0.33
USP46-209ENST00000514536 IRX6P78412 446 aaPredicted RBP17.13■□□□□ 0.33
USP46-209ENST00000514536 ANGEL2Q5VTE6 544 aaKnown RBP17.13■□□□□ 0.33
USP46-209ENST00000514536 CDC37L1Q7L3B6 337 aa17.13■□□□□ 0.33
USP46-209ENST00000514536 HMG20BQ9P0W2 317 aa17.13■□□□□ 0.33
USP46-209ENST00000514536 AAMPQ13685 434 aa17.12■□□□□ 0.33
USP46-209ENST00000514536 PI16Q6UXB8 463 aa17.12■□□□□ 0.33
USP46-209ENST00000514536 KRT26Q7Z3Y9 468 aa17.12■□□□□ 0.33
USP46-209ENST00000514536 ZBED3Q96IU2 234 aaPredicted RBP17.12■□□□□ 0.33
USP46-209ENST00000514536 SUGT1Q9Y2Z0 365 aa17.12■□□□□ 0.33
USP46-209ENST00000514536 MCAMP43121 646 aa17.11■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 40.5 ms