RNA–Protein interactions for RNA: ENST00000513873.1

CLDND1-228, Transcript of claudin domain containing 1, humanhuman

TSL 3

Gene CLDND1, Length 538 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDND1-228ENST00000513873 KANSL3Q9P2N6 904 aa7.04□□□□□ -1.28
CLDND1-228ENST00000513873 AMOTL2Q9Y2J4 779 aa7.04□□□□□ -1.28
CLDND1-228ENST00000513873 STARD13Q9Y3M8 1113 aa7.04□□□□□ -1.28
CLDND1-228ENST00000513873 TSPOAP1O95153 1857 aa7.04□□□□□ -1.28
CLDND1-228ENST00000513873 RAD54L2Q9Y4B4 1467 aa7.04□□□□□ -1.28
CLDND1-228ENST00000513873 CYP2E1P05181 493 aaPredicted RBP7.03□□□□□ -1.28
CLDND1-228ENST00000513873 PLCB3Q01970 1234 aa7.03□□□□□ -1.28
CLDND1-228ENST00000513873 NRG1Q02297 640 aaPredicted RBP7.03□□□□□ -1.28
CLDND1-228ENST00000513873 GRIK4Q16099 956 aa7.03□□□□□ -1.28
CLDND1-228ENST00000513873 TRAPPC3LQ5T215 181 aa7.03□□□□□ -1.28
CLDND1-228ENST00000513873 TXNRD3Q86VQ6 643 aa7.03□□□□□ -1.28
CLDND1-228ENST00000513873 CACTIN-AS1Q8N1I8 211 aa7.03□□□□□ -1.28
CLDND1-228ENST00000513873 TTC9Q92623 222 aa7.03□□□□□ -1.28
CLDND1-228ENST00000513873 FAM129BQ96TA1 746 aa7.03□□□□□ -1.28
CLDND1-228ENST00000513873 KRTAP4-9Q9BYQ8 210 aa7.03□□□□□ -1.28
CLDND1-228ENST00000513873 NIF3L1Q9GZT8 377 aa7.03□□□□□ -1.28
CLDND1-228ENST00000513873 ZFYVE28Q9HCC9 887 aa7.03□□□□□ -1.28
CLDND1-228ENST00000513873 FOXD3Q9UJU5 478 aaPredicted RBP7.03□□□□□ -1.28
CLDND1-228ENST00000513873 DIP2BQ9P265 1576 aa7.03□□□□□ -1.28
CLDND1-228ENST00000513873 MAPKBP1O60336 1514 aa7.02□□□□□ -1.29
CLDND1-228ENST00000513873 CPNE3O75131 537 aaKnown RBP7.02□□□□□ -1.29
CLDND1-228ENST00000513873 CEP135Q66GS9 1140 aa7.02□□□□□ -1.29
CLDND1-228ENST00000513873 C20orf204Q6ZNR8 217 aa7.02□□□□□ -1.29
CLDND1-228ENST00000513873 WFDC8Q8IUA0 241 aa7.02□□□□□ -1.29
CLDND1-228ENST00000513873 LPIN3Q9BQK8 851 aa7.02□□□□□ -1.29
CLDND1-228ENST00000513873 NAGPAQ9UK23 515 aa7.02□□□□□ -1.29
CLDND1-228ENST00000513873 RNF114Q9Y508 228 aa7.02□□□□□ -1.29
CLDND1-228ENST00000513873 CEP170Q5SW79 1584 aa7.02□□□□□ -1.29
CLDND1-228ENST00000513873 EREGO14944 169 aa7.01□□□□□ -1.29
CLDND1-228ENST00000513873 KIF4AO95239 1232 aa7.01□□□□□ -1.29
CLDND1-228ENST00000513873 RAC1P63000 192 aa7.01□□□□□ -1.29
CLDND1-228ENST00000513873 GDF6Q6KF10 455 aaPredicted RBP7.01□□□□□ -1.29
CLDND1-228ENST00000513873 TMC7Q7Z402 723 aa7.01□□□□□ -1.29
CLDND1-228ENST00000513873 DNAJC25Q9H1X3 360 aa7.01□□□□□ -1.29
CLDND1-228ENST00000513873 SALL4Q9UJQ4 1053 aa7.01□□□□□ -1.29
CLDND1-228ENST00000513873 SHROOM2Q13796 1616 aa7.01□□□□□ -1.29
CLDND1-228ENST00000513873 PBRM1Q86U86 1689 aa7□□□□□ -1.29
CLDND1-228ENST00000513873 ADGRE1Q14246 886 aa7□□□□□ -1.29
CLDND1-228ENST00000513873 COL13A1Q5TAT6 717 aaPredicted RBP7□□□□□ -1.29
CLDND1-228ENST00000513873 C8orf86Q6ZUL3 223 aa7□□□□□ -1.29
CLDND1-228ENST00000513873 PBX4Q9BYU1 374 aa7□□□□□ -1.29
CLDND1-228ENST00000513873 PTPRAP18433 802 aa6.99□□□□□ -1.29
CLDND1-228ENST00000513873 AFF1P51825 1210 aaKnown RBP6.99□□□□□ -1.29
CLDND1-228ENST00000513873 CABP4P57796 275 aa6.99□□□□□ -1.29
CLDND1-228ENST00000513873 MBTPS1Q14703 1052 aa6.99□□□□□ -1.29
CLDND1-228ENST00000513873 CCDC27Q2M243 656 aa6.99□□□□□ -1.29
CLDND1-228ENST00000513873 IL22RA1Q8N6P7 574 aa6.99□□□□□ -1.29
CLDND1-228ENST00000513873 CEP120Q8N960 986 aa6.99□□□□□ -1.29
CLDND1-228ENST00000513873 ALKBH8Q96BT7 664 aaKnown RBP6.99□□□□□ -1.29
CLDND1-228ENST00000513873 ASB16Q96NS5 453 aa6.99□□□□□ -1.29
CLDND1-228ENST00000513873 OSMRQ99650 979 aa6.99□□□□□ -1.29
CLDND1-228ENST00000513873 MUC3BQ9H195 1237 aa6.99□□□□□ -1.29
CLDND1-228ENST00000513873 RASSF4Q9H2L5 321 aa6.99□□□□□ -1.29
CLDND1-228ENST00000513873 CHRDQ9H2X0 955 aa6.99□□□□□ -1.29
CLDND1-228ENST00000513873 DISP3Q9P2K9 1392 aa6.98□□□□□ -1.29
CLDND1-228ENST00000513873 PDE2AO00408 941 aaPredicted RBP6.98□□□□□ -1.29
CLDND1-228ENST00000513873 EIF1AYO14602 144 aaKnown RBP6.98□□□□□ -1.29
CLDND1-228ENST00000513873 GPR182O15218 404 aa6.98□□□□□ -1.29
CLDND1-228ENST00000513873 POLR3DP05423 398 aaPredicted RBP6.98□□□□□ -1.29
CLDND1-228ENST00000513873 ATP11AP98196 1134 aa6.98□□□□□ -1.29
CLDND1-228ENST00000513873 ATP2B2Q01814 1243 aa6.98□□□□□ -1.29
CLDND1-228ENST00000513873 ORC1Q13415 861 aa6.98□□□□□ -1.29
CLDND1-228ENST00000513873 MSL1Q68DK7 614 aa6.98□□□□□ -1.29
CLDND1-228ENST00000513873 FAM117BQ6P1L5 589 aa6.98□□□□□ -1.29
CLDND1-228ENST00000513873 DMRTC2Q8IXT2 367 aaPredicted RBP6.98□□□□□ -1.29
CLDND1-228ENST00000513873 DCAF11Q8TEB1 546 aa6.98□□□□□ -1.29
CLDND1-228ENST00000513873 CSRNP1Q96S65 589 aa6.98□□□□□ -1.29
CLDND1-228ENST00000513873 LACRTQ9GZZ8 138 aa6.98□□□□□ -1.29
CLDND1-228ENST00000513873 NLRP2Q9NX02 1062 aa6.98□□□□□ -1.29
CLDND1-228ENST00000513873 PPP4R2Q9NY27 417 aa6.98□□□□□ -1.29
CLDND1-228ENST00000513873 GADD45BO75293 160 aaPredicted RBP6.97□□□□□ -1.29
CLDND1-228ENST00000513873 CDC27P30260 824 aa6.97□□□□□ -1.29
CLDND1-228ENST00000513873 MAPK8P45983 427 aa6.97□□□□□ -1.29
CLDND1-228ENST00000513873 GALNT12Q8IXK2 581 aa6.97□□□□□ -1.29
CLDND1-228ENST00000513873 DZANK1Q9NVP4 752 aa6.97□□□□□ -1.29
CLDND1-228ENST00000513873 TRIM33Q9UPN9 1127 aa6.97□□□□□ -1.29
CLDND1-228ENST00000513873 PPME1Q9Y570 386 aa6.97□□□□□ -1.29
CLDND1-228ENST00000513873 WRNQ14191 1432 aaPredicted RBP eCLIP6.96□□□□□ -1.3
CLDND1-228ENST00000513873 EEA1Q15075 1411 aa6.96□□□□□ -1.3
CLDND1-228ENST00000513873 TREHO43280 583 aa6.96□□□□□ -1.3
CLDND1-228ENST00000513873 NID1P14543 1247 aa6.96□□□□□ -1.3
CLDND1-228ENST00000513873 FGD1P98174 961 aa6.96□□□□□ -1.3
CLDND1-228ENST00000513873 DTWD1Q8N5C7 304 aa6.96□□□□□ -1.3
CLDND1-228ENST00000513873 CCDC74AQ96AQ1 378 aa6.96□□□□□ -1.3
CLDND1-228ENST00000513873 NUP160Q12769 1436 aa6.95□□□□□ -1.3
CLDND1-228ENST00000513873 TOP2BQ02880 1626 aa6.95□□□□□ -1.3
CLDND1-228ENST00000513873 ARID1BQ8NFD5 2236 aaPredicted RBP6.95□□□□□ -1.3
CLDND1-228ENST00000513873 PNMA6FA0A0J9YX94 578 aa6.95□□□□□ -1.3
CLDND1-228ENST00000513873 TAL1P17542 331 aaPredicted RBP6.95□□□□□ -1.3
CLDND1-228ENST00000513873 TMCO4Q5TGY1 634 aa6.95□□□□□ -1.3
CLDND1-228ENST00000513873 MAP4K3Q8IVH8 894 aa6.95□□□□□ -1.3
CLDND1-228ENST00000513873 TMEM102Q8N9M5 508 aaPredicted RBP6.95□□□□□ -1.3
CLDND1-228ENST00000513873 ASAP3Q8TDY4 903 aa6.95□□□□□ -1.3
CLDND1-228ENST00000513873 LENG1Q96BZ8 264 aaPredicted RBP6.95□□□□□ -1.3
CLDND1-228ENST00000513873 EHD4Q9H223 541 aa6.95□□□□□ -1.3
CLDND1-228ENST00000513873 SRA1Q9HD15 236 aaKnown RBP6.95□□□□□ -1.3
CLDND1-228ENST00000513873 USP21Q9UK80 565 aa6.95□□□□□ -1.3
CLDND1-228ENST00000513873 GRIN2AQ12879 1464 aa6.95□□□□□ -1.3
CLDND1-228ENST00000513873 FGD5Q6ZNL6 1462 aa6.95□□□□□ -1.3
CLDND1-228ENST00000513873 ERCC3P19447 782 aa6.94□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms