RNA–Protein interactions for RNA: ENST00000513761.5

CLCN3-209, Transcript of chloride voltage-gated channel 3, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CLCN3, Length 6,692 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN3-209ENST00000513761 UGGT1Q9NYU2 1555 aa8.84□□□□□ -0.99
CLCN3-209ENST00000513761 GOLGA6L7A0A1B0GV03 622 aa8.84□□□□□ -0.99
CLCN3-209ENST00000513761 MYO1BO43795 1136 aa8.84□□□□□ -0.99
CLCN3-209ENST00000513761 AKR1B10O60218 316 aa8.84□□□□□ -0.99
CLCN3-209ENST00000513761 ZFYP08048 801 aaPredicted RBP8.84□□□□□ -0.99
CLCN3-209ENST00000513761 HOXC9P31274 260 aa8.84□□□□□ -0.99
CLCN3-209ENST00000513761 IFFO1Q0D2I5 559 aa8.84□□□□□ -0.99
CLCN3-209ENST00000513761 RABEP2Q9H5N1 569 aa8.84□□□□□ -0.99
CLCN3-209ENST00000513761 FAM135BQ49AJ0 1406 aa8.84□□□□□ -0.99
CLCN3-209ENST00000513761 IL15P40933 162 aaPredicted RBP8.84□□□□□ -0.99
CLCN3-209ENST00000513761 UBA7P41226 1012 aa8.84□□□□□ -0.99
CLCN3-209ENST00000513761 TNNI3KQ59H18 835 aa8.84□□□□□ -0.99
CLCN3-209ENST00000513761 MICALCLQ6ZW33 695 aa8.84□□□□□ -0.99
CLCN3-209ENST00000513761 LLPHQ9BRT6 129 aaKnown RBP8.84□□□□□ -0.99
CLCN3-209ENST00000513761 FPGT-TNNI3KV9GXZ4 949 aa8.84□□□□□ -0.99
CLCN3-209ENST00000513761 HSF2BPO75031 334 aa8.84□□□□□ -0.99
CLCN3-209ENST00000513761 IDEP14735 1019 aa8.84□□□□□ -0.99
CLCN3-209ENST00000513761 NLRP12P59046 1061 aa8.84□□□□□ -0.99
CLCN3-209ENST00000513761 CKAP4Q07065 602 aaKnown RBP8.84□□□□□ -0.99
CLCN3-209ENST00000513761 GOPCQ9HD26 462 aa8.84□□□□□ -0.99
CLCN3-209ENST00000513761 ARHGEF5Q12774 1597 aa8.84□□□□□ -0.99
CLCN3-209ENST00000513761 STARD3NLO95772 234 aa8.84□□□□□ -0.99
CLCN3-209ENST00000513761 ASXL2Q76L83 1435 aa8.84□□□□□ -0.99
CLCN3-209ENST00000513761 SMC1AQ14683 1233 aaKnown RBP8.83□□□□□ -1
CLCN3-209ENST00000513761 TTF1Q15361 905 aaPredicted RBP8.83□□□□□ -1
CLCN3-209ENST00000513761 NUTM2AQ8IVF1 878 aaPredicted RBP8.83□□□□□ -1
CLCN3-209ENST00000513761 IFNL2Q8IZJ0 200 aa8.83□□□□□ -1
CLCN3-209ENST00000513761 IGSF22Q8N9C0 903 aa8.83□□□□□ -1
CLCN3-209ENST00000513761 KRI1Q8N9T8 703 aaKnown RBP8.83□□□□□ -1
CLCN3-209ENST00000513761 NFATC2IPQ8NCF5 419 aa8.83□□□□□ -1
CLCN3-209ENST00000513761 SEC62Q99442 399 aaKnown RBP8.83□□□□□ -1
CLCN3-209ENST00000513761 LONRF3Q496Y0 759 aa8.83□□□□□ -1
CLCN3-209ENST00000513761 STAP2Q9UGK3 403 aa8.83□□□□□ -1
CLCN3-209ENST00000513761 KCNH3Q9ULD8 1083 aa8.83□□□□□ -1
CLCN3-209ENST00000513761 SLC5A1P13866 664 aa8.83□□□□□ -1
CLCN3-209ENST00000513761 ADKP55263 362 aaKnown RBP8.83□□□□□ -1
CLCN3-209ENST00000513761 ANKLE2Q86XL3 938 aa8.83□□□□□ -1
CLCN3-209ENST00000513761 TRMT44Q8IYL2 757 aaKnown RBP8.83□□□□□ -1
CLCN3-209ENST00000513761 EHBP1Q8NDI1 1231 aa8.83□□□□□ -1
CLCN3-209ENST00000513761 CALRP27797 417 aaKnown RBP8.83□□□□□ -1
CLCN3-209ENST00000513761 UBXN1Q04323 297 aa8.83□□□□□ -1
CLCN3-209ENST00000513761 BICDL1Q6ZP65 573 aa8.83□□□□□ -1
CLCN3-209ENST00000513761 C11orf57Q6ZUT1 292 aaPredicted RBP8.83□□□□□ -1
CLCN3-209ENST00000513761 EAF2Q96CJ1 260 aaPredicted RBP8.83□□□□□ -1
CLCN3-209ENST00000513761 TRIM75PA6NK02 468 aa8.83□□□□□ -1
CLCN3-209ENST00000513761 ZEB2O60315 1214 aa8.83□□□□□ -1
CLCN3-209ENST00000513761 CYLC1P35663 651 aaPredicted RBP8.83□□□□□ -1
CLCN3-209ENST00000513761 NAA30Q147X3 362 aaPredicted RBP8.83□□□□□ -1
CLCN3-209ENST00000513761 NAA16Q6N069 864 aaPredicted RBP8.83□□□□□ -1
CLCN3-209ENST00000513761 ATRIPQ8WXE1 791 aa8.83□□□□□ -1
CLCN3-209ENST00000513761 MRFAP1L1Q96HT8 127 aa8.83□□□□□ -1
CLCN3-209ENST00000513761 ZKSCAN3Q9BRR0 538 aa8.83□□□□□ -1
CLCN3-209ENST00000513761 KIAA1468Q9P260 1216 aa8.83□□□□□ -1
CLCN3-209ENST00000513761 TMCO5BA8MYB1 307 aa8.82□□□□□ -1
CLCN3-209ENST00000513761 EBAG9O00559 213 aa8.82□□□□□ -1
CLCN3-209ENST00000513761 IRX3P78415 501 aaPredicted RBP8.82□□□□□ -1
CLCN3-209ENST00000513761 PTPN21Q16825 1174 aa8.82□□□□□ -1
CLCN3-209ENST00000513761 TICAM2Q86XR7 235 aa8.82□□□□□ -1
CLCN3-209ENST00000513761 TDRD7Q8NHU6 1098 aaKnown RBP8.82□□□□□ -1
CLCN3-209ENST00000513761 DYDC1Q8WWB3 177 aa8.82□□□□□ -1
CLCN3-209ENST00000513761 DESI2Q9BSY9 194 aa8.82□□□□□ -1
CLCN3-209ENST00000513761 PHF23Q9BUL5 403 aaPredicted RBP8.82□□□□□ -1
CLCN3-209ENST00000513761 FTOQ9C0B1 505 aaKnown RBP eCLIP8.82□□□□□ -12e-7■□□□□ 9
CLCN3-209ENST00000513761 IQSEC3Q9UPP2 1182 aaPredicted RBP8.82□□□□□ -1
CLCN3-209ENST00000513761 NFE2L3Q9Y4A8 694 aa8.82□□□□□ -1
CLCN3-209ENST00000513761 TTC37Q6PGP7 1564 aa8.82□□□□□ -1
CLCN3-209ENST00000513761 TRPM1Q7Z4N2 1603 aa8.82□□□□□ -1
CLCN3-209ENST00000513761 ARHGAP6O43182 974 aa8.82□□□□□ -1
CLCN3-209ENST00000513761 ZSCAN26Q16670 478 aa8.82□□□□□ -1
CLCN3-209ENST00000513761 PLXNC1O60486 1568 aa8.82□□□□□ -1
CLCN3-209ENST00000513761 POLR2DO15514 142 aaKnown RBP8.82□□□□□ -1
CLCN3-209ENST00000513761 NEFHP12036 1026 aa8.82□□□□□ -1
CLCN3-209ENST00000513761 STAT6P42226 847 aa8.82□□□□□ -1
CLCN3-209ENST00000513761 PNOCQ13519 176 aa8.82□□□□□ -1
CLCN3-209ENST00000513761 ARID5BQ14865 1188 aa8.82□□□□□ -1
CLCN3-209ENST00000513761 MKNK2Q9HBH9 465 aa8.82□□□□□ -1
CLCN3-209ENST00000513761 ZNF853P0CG23 659 aa8.82□□□□□ -1
CLCN3-209ENST00000513761 PHKBQ93100 1093 aa8.82□□□□□ -1
CLCN3-209ENST00000513761 VPS16Q9H269 839 aa8.82□□□□□ -1
CLCN3-209ENST00000513761 TMOD3Q9NYL9 352 aa8.82□□□□□ -1
CLCN3-209ENST00000513761 NOP2P46087 812 aaKnown RBP8.82□□□□□ -1
CLCN3-209ENST00000513761 SPAG1Q07617 926 aa8.82□□□□□ -1
CLCN3-209ENST00000513761 CHRNA2Q15822 529 aa8.82□□□□□ -1
CLCN3-209ENST00000513761 CLEC17AQ6ZS10 378 aa8.82□□□□□ -1
CLCN3-209ENST00000513761 NAA15Q9BXJ9 866 aaKnown RBP8.82□□□□□ -1
CLCN3-209ENST00000513761 ATP7AQ04656 1500 aa8.82□□□□□ -1
CLCN3-209ENST00000513761 KCNQ3O43525 872 aa8.82□□□□□ -1
CLCN3-209ENST00000513761 ETF1P62495 437 aaKnown RBP8.82□□□□□ -1
CLCN3-209ENST00000513761 TSG101Q99816 390 aa8.82□□□□□ -1
CLCN3-209ENST00000513761 CABP5Q9NP86 173 aa8.82□□□□□ -1
CLCN3-209ENST00000513761 DDX21Q9NR30 783 aaKnown RBP eCLIP8.82□□□□□ -1
CLCN3-209ENST00000513761 HELLSQ9NRZ9 838 aa8.82□□□□□ -1
CLCN3-209ENST00000513761 B4E1Z4 1266 aa8.81□□□□□ -1
CLCN3-209ENST00000513761 RNMTO43148 476 aaKnown RBP8.81□□□□□ -1
CLCN3-209ENST00000513761 SEC31AO94979 1220 aaKnown RBP8.81□□□□□ -1
CLCN3-209ENST00000513761 NCBP1Q09161 790 aaKnown RBP8.81□□□□□ -1
CLCN3-209ENST00000513761 SAMD9LQ8IVG5 1584 aa8.81□□□□□ -1
CLCN3-209ENST00000513761 GOLGA8FQ08AF8 430 aa8.81□□□□□ -1
CLCN3-209ENST00000513761 GOLGA8DPQ0D2H9 430 aa8.81□□□□□ -1
CLCN3-209ENST00000513761 GDAP1L1Q96MZ0 367 aa8.81□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 40.7 ms