RNA–Protein interactions for RNA: ENST00000513562.1

DDX41-216, Transcript of DEAD-box helicase 41, humanhuman

TSL 4

Gene DDX41, Length 552 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX41-216ENST00000513562 NBPF12Q5TAG4 269 aaPredicted RBP14.1□□□□□ -0.15
DDX41-216ENST00000513562 ANKRD13AQ8IZ07 590 aa14.1□□□□□ -0.15
DDX41-216ENST00000513562 OTUD5Q96G74 571 aa14.1□□□□□ -0.15
DDX41-216ENST00000513562 IFT57Q9NWB7 429 aa14.1□□□□□ -0.15
DDX41-216ENST00000513562 PTCH2Q9Y6C5 1203 aa14.1□□□□□ -0.15
DDX41-216ENST00000513562 IRS2Q9Y4H2 1338 aa14.1□□□□□ -0.15
DDX41-216ENST00000513562 H0YGN5 161 aa14.09□□□□□ -0.15
DDX41-216ENST00000513562 USP2O75604 605 aaPredicted RBP14.09□□□□□ -0.15
DDX41-216ENST00000513562 CFAP100Q494V2 611 aa14.09□□□□□ -0.15
DDX41-216ENST00000513562 KSR2Q6VAB6 950 aa14.09□□□□□ -0.15
DDX41-216ENST00000513562 NBPF11Q86T75 865 aa14.09□□□□□ -0.15
DDX41-216ENST00000513562 MS4A4AQ96JQ5 239 aa14.09□□□□□ -0.15
DDX41-216ENST00000513562 AOX1Q06278 1338 aa14.09□□□□□ -0.15
DDX41-216ENST00000513562 RANBP2P49792 3224 aaKnown RBP14.08□□□□□ -0.16
DDX41-216ENST00000513562 PI4KAP2A4QPH2 592 aa14.08□□□□□ -0.16
DDX41-216ENST00000513562 H7C1W4 665 aa14.08□□□□□ -0.16
DDX41-216ENST00000513562 ITGA6P23229 1130 aa14.08□□□□□ -0.16
DDX41-216ENST00000513562 KCNJ4P48050 445 aa14.08□□□□□ -0.16
DDX41-216ENST00000513562 FKBP1AP62942 108 aaKnown RBP14.08□□□□□ -0.16
DDX41-216ENST00000513562 RASA3Q14644 834 aa14.08□□□□□ -0.16
DDX41-216ENST00000513562 ARHGEF6Q15052 776 aa14.08□□□□□ -0.16
DDX41-216ENST00000513562 CWF19L2Q2TBE0 894 aaKnown RBP14.08□□□□□ -0.16
DDX41-216ENST00000513562 SLC4A8Q2Y0W8 1093 aa14.08□□□□□ -0.16
DDX41-216ENST00000513562 CCDC30Q5VVM6 783 aa14.08□□□□□ -0.16
DDX41-216ENST00000513562 PI4KAP1Q8N8J0 262 aa14.08□□□□□ -0.16
DDX41-216ENST00000513562 C8orf58Q8NAV2 365 aa14.08□□□□□ -0.16
DDX41-216ENST00000513562 OPTNQ96CV9 577 aa14.08□□□□□ -0.16
DDX41-216ENST00000513562 PRMT6Q96LA8 375 aaPredicted RBP14.08□□□□□ -0.16
DDX41-216ENST00000513562 MPHOSPH8Q99549 860 aa14.08□□□□□ -0.16
DDX41-216ENST00000513562 PLA2G12BQ9BX93 195 aa14.08□□□□□ -0.16
DDX41-216ENST00000513562 VEZTQ9HBM0 779 aa14.08□□□□□ -0.16
DDX41-216ENST00000513562 NEURL1BA8MQ27 555 aa14.07□□□□□ -0.16
DDX41-216ENST00000513562 GNAI1P63096 354 aa14.07□□□□□ -0.16
DDX41-216ENST00000513562 CHRNDQ07001 517 aa14.07□□□□□ -0.16
DDX41-216ENST00000513562 NEXNQ0ZGT2 675 aa14.07□□□□□ -0.16
DDX41-216ENST00000513562 WDR43Q15061 677 aaKnown RBP eCLIP14.07□□□□□ -0.16
DDX41-216ENST00000513562 C15orf52Q6ZUT6 534 aaKnown RBP14.07□□□□□ -0.16
DDX41-216ENST00000513562 UBE3BQ7Z3V4 1068 aa14.07□□□□□ -0.16
DDX41-216ENST00000513562 BRI3BPQ8WY22 251 aa14.07□□□□□ -0.16
DDX41-216ENST00000513562 CHMP4AQ9BY43 222 aa14.07□□□□□ -0.16
DDX41-216ENST00000513562 ELP3Q9H9T3 547 aa14.07□□□□□ -0.16
DDX41-216ENST00000513562 ADAMTS8Q9UP79 889 aa14.07□□□□□ -0.16
DDX41-216ENST00000513562 MYBBP1AQ9BQG0 1328 aaKnown RBP14.07□□□□□ -0.16
DDX41-216ENST00000513562 F8W031 263 aaPredicted RBP14.06□□□□□ -0.16
DDX41-216ENST00000513562 IL1R1P14778 569 aa14.06□□□□□ -0.16
DDX41-216ENST00000513562 ZFYVE28Q9HCC9 887 aa14.06□□□□□ -0.16
DDX41-216ENST00000513562 SNAP23O00161 211 aa14.05□□□□□ -0.16
DDX41-216ENST00000513562 CSF1RP07333 972 aa14.05□□□□□ -0.16
DDX41-216ENST00000513562 CALD1Q05682 793 aaKnown RBP14.05□□□□□ -0.16
DDX41-216ENST00000513562 TAF1CQ15572 869 aaPredicted RBP14.05□□□□□ -0.16
DDX41-216ENST00000513562 CHRDL2Q6WN34 429 aa14.05□□□□□ -0.16
DDX41-216ENST00000513562 PPP1R3FQ6ZSY5 799 aaPredicted RBP14.05□□□□□ -0.16
DDX41-216ENST00000513562 CNKSR2Q8WXI2 1034 aa14.05□□□□□ -0.16
DDX41-216ENST00000513562 KIAA0100Q14667 2235 aaKnown RBP14.05□□□□□ -0.16
DDX41-216ENST00000513562 CCL15-CCL14A0A0B4J2E2 113 aa14.04□□□□□ -0.16
DDX41-216ENST00000513562 MYCP01106 439 aaPredicted RBP14.04□□□□□ -0.16
DDX41-216ENST00000513562 GTF2A2P52657 109 aa14.04□□□□□ -0.16
DDX41-216ENST00000513562 CASP7P55210 303 aa14.04□□□□□ -0.16
DDX41-216ENST00000513562 TNFAIP1Q13829 316 aa14.04□□□□□ -0.16
DDX41-216ENST00000513562 CCL15Q16663 113 aa14.04□□□□□ -0.16
DDX41-216ENST00000513562 SPDYE2Q495Y8 402 aa14.04□□□□□ -0.16
DDX41-216ENST00000513562 ZNF804AQ7Z570 1209 aa14.04□□□□□ -0.16
DDX41-216ENST00000513562 FAM43AQ8N2R8 423 aa14.04□□□□□ -0.16
DDX41-216ENST00000513562 SH3TC2Q8TF17 1288 aa14.04□□□□□ -0.16
DDX41-216ENST00000513562 TEPSINQ96N21 525 aa14.04□□□□□ -0.16
DDX41-216ENST00000513562 SPEF2Q9C093 1822 aa14.04□□□□□ -0.16
DDX41-216ENST00000513562 TAF5LO75529 589 aa14.03□□□□□ -0.16
DDX41-216ENST00000513562 VGLL4Q14135 290 aa14.03□□□□□ -0.16
DDX41-216ENST00000513562 GCKRQ14397 625 aa14.03□□□□□ -0.16
DDX41-216ENST00000513562 CDAN1Q8IWY9 1227 aa14.03□□□□□ -0.16
DDX41-216ENST00000513562 TSPYL6Q8N831 410 aa14.03□□□□□ -0.16
DDX41-216ENST00000513562 DDX55Q8NHQ9 600 aaKnown RBP eCLIP14.03□□□□□ -0.16
DDX41-216ENST00000513562 ARHGAP39Q9C0H5 1083 aa14.03□□□□□ -0.16
DDX41-216ENST00000513562 RBM27Q9P2N5 1060 aaKnown RBP14.03□□□□□ -0.16
DDX41-216ENST00000513562 RBM5P52756 815 aaKnown RBP eCLIP14.02□□□□□ -0.17
DDX41-216ENST00000513562 LACTBP83111 547 aaPredicted RBP14.02□□□□□ -0.17
DDX41-216ENST00000513562 SHISA4Q96DD7 197 aa14.02□□□□□ -0.17
DDX41-216ENST00000513562 ZNF70Q9UC06 446 aaPredicted RBP14.02□□□□□ -0.17
DDX41-216ENST00000513562 JAG2Q9Y219 1238 aa14.02□□□□□ -0.17
DDX41-216ENST00000513562 ANKRD18BA2A2Z9 1011 aa14.01□□□□□ -0.17
DDX41-216ENST00000513562 TLR2O60603 784 aa14.01□□□□□ -0.17
DDX41-216ENST00000513562 GNRH1P01148 92 aa14.01□□□□□ -0.17
DDX41-216ENST00000513562 MAP3K9P80192 1104 aa14.01□□□□□ -0.17
DDX41-216ENST00000513562 HELBQ8NG08 1087 aaPredicted RBP14.01□□□□□ -0.17
DDX41-216ENST00000513562 PRO3102Q9H379 93 aa14.01□□□□□ -0.17
DDX41-216ENST00000513562 ZCCHC17Q9NP64 241 aaKnown RBP14.01□□□□□ -0.17
DDX41-216ENST00000513562 SERPINA10Q9UK55 444 aa14.01□□□□□ -0.17
DDX41-216ENST00000513562 OTOFQ9HC10 1997 aa14.01□□□□□ -0.17
DDX41-216ENST00000513562 FAM205AQ6ZU69 1335 aa14□□□□□ -0.17
DDX41-216ENST00000513562 ECM29Q5VYK3 1845 aa14□□□□□ -0.17
DDX41-216ENST00000513562 SPDYE5A6NIY4 337 aa14□□□□□ -0.17
DDX41-216ENST00000513562 APAF1O14727 1248 aa14□□□□□ -0.17
DDX41-216ENST00000513562 WDHD1O75717 1129 aaPredicted RBP14□□□□□ -0.17
DDX41-216ENST00000513562 PRMT2P55345 433 aa14□□□□□ -0.17
DDX41-216ENST00000513562 KIF22Q14807 665 aa14□□□□□ -0.17
DDX41-216ENST00000513562 G2E3Q7L622 706 aa14□□□□□ -0.17
DDX41-216ENST00000513562 UBE2Q1Q7Z7E8 422 aa14□□□□□ -0.17
DDX41-216ENST00000513562 STK31Q9BXU1 1019 aa14□□□□□ -0.17
DDX41-216ENST00000513562 CSADQ9Y600 493 aa14□□□□□ -0.17
DDX41-216ENST00000513562 MYH3P11055 1940 aa14□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms