RNA–Protein interactions for RNA: ENST00000513143.5

PDPN-210, Transcript of podoplanin, humanhuman

TSL 1 (best) BASIC

Gene PDPN, Length 1,305 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDPN-210ENST00000513143 PPIP5K2O43314 1243 aa15.27■□□□□ 0.04
PDPN-210ENST00000513143 GSPT1P15170 499 aaKnown RBP15.27■□□□□ 0.04
PDPN-210ENST00000513143 RASGRF1Q13972 1273 aa15.27■□□□□ 0.04
PDPN-210ENST00000513143 AOC3Q16853 763 aa15.27■□□□□ 0.04
PDPN-210ENST00000513143 BMP2KLQ5H9B9 411 aa15.27■□□□□ 0.04
PDPN-210ENST00000513143 HMG20BQ9P0W2 317 aa15.27■□□□□ 0.04
PDPN-210ENST00000513143 SBF1O95248 1867 aa15.27■□□□□ 0.03
PDPN-210ENST00000513143 IARSP41252 1262 aaKnown RBP15.26■□□□□ 0.03
PDPN-210ENST00000513143 SPATA5Q8NB90 893 aa15.26■□□□□ 0.03
PDPN-210ENST00000513143 DENND2AQ9ULE3 1009 aa15.26■□□□□ 0.03
PDPN-210ENST00000513143 IQSEC3Q9UPP2 1182 aaPredicted RBP15.26■□□□□ 0.03
PDPN-210ENST00000513143 PDS5AQ29RF7 1337 aaKnown RBP15.26■□□□□ 0.03
PDPN-210ENST00000513143 DICER1Q9UPY3 1922 aaKnown RBP15.26■□□□□ 0.03
PDPN-210ENST00000513143 COL1A1P02452 1464 aaPredicted RBP15.26■□□□□ 0.03
PDPN-210ENST00000513143 ZAP70P43403 619 aa15.25■□□□□ 0.03
PDPN-210ENST00000513143 DOK7Q18PE1 504 aa15.25■□□□□ 0.03
PDPN-210ENST00000513143 PI16Q6UXB8 463 aa15.25■□□□□ 0.03
PDPN-210ENST00000513143 ARHGAP27Q6ZUM4 889 aa15.25■□□□□ 0.03
PDPN-210ENST00000513143 PODNQ7Z5L7 613 aa15.25■□□□□ 0.03
PDPN-210ENST00000513143 PELP1Q8IZL8 1130 aaKnown RBP15.25■□□□□ 0.03
PDPN-210ENST00000513143 DNAJC2Q99543 621 aaKnown RBP15.25■□□□□ 0.03
PDPN-210ENST00000513143 SNRKQ9NRH2 765 aa15.25■□□□□ 0.03
PDPN-210ENST00000513143 MYO5AQ9Y4I1 1855 aaKnown RBP15.25■□□□□ 0.03
PDPN-210ENST00000513143 SCN9AQ15858 1988 aa15.24■□□□□ 0.03
PDPN-210ENST00000513143 COL4A5P29400 1685 aa15.24■□□□□ 0.03
PDPN-210ENST00000513143 G3V3G9 751 aa15.24■□□□□ 0.03
PDPN-210ENST00000513143 FRAT2O75474 233 aaPredicted RBP15.24■□□□□ 0.03
PDPN-210ENST00000513143 RASSF7Q02833 373 aa15.24■□□□□ 0.03
PDPN-210ENST00000513143 DCAF8Q5TAQ9 597 aa15.24■□□□□ 0.03
PDPN-210ENST00000513143 LARGE2Q8N3Y3 721 aa15.24■□□□□ 0.03
PDPN-210ENST00000513143 DBNDD1Q9H9R9 158 aa15.24■□□□□ 0.03
PDPN-210ENST00000513143 PAG1Q9NWQ8 432 aa15.24■□□□□ 0.03
PDPN-210ENST00000513143 NDUFB9Q9Y6M9 179 aa15.24■□□□□ 0.03
PDPN-210ENST00000513143 PSME4Q14997 1843 aa15.24■□□□□ 0.03
PDPN-210ENST00000513143 ECE2O60344 883 aa15.23■□□□□ 0.03
PDPN-210ENST00000513143 MAP4K4O95819 1239 aaPredicted RBP15.23■□□□□ 0.03
PDPN-210ENST00000513143 CYP2E1P05181 493 aaPredicted RBP15.23■□□□□ 0.03
PDPN-210ENST00000513143 SDSP20132 328 aa15.23■□□□□ 0.03
PDPN-210ENST00000513143 PRELPP51888 382 aa15.23■□□□□ 0.03
PDPN-210ENST00000513143 GPR162Q16538 588 aa15.23■□□□□ 0.03
PDPN-210ENST00000513143 CNTROBQ8N137 903 aa15.23■□□□□ 0.03
PDPN-210ENST00000513143 EVI5LQ96CN4 794 aa15.23■□□□□ 0.03
PDPN-210ENST00000513143 EDC3Q96F86 508 aaKnown RBP15.23■□□□□ 0.03
PDPN-210ENST00000513143 FOXD4L1Q9NU39 408 aa15.23■□□□□ 0.03
PDPN-210ENST00000513143 FAM205AQ6ZU69 1335 aa15.23■□□□□ 0.03
PDPN-210ENST00000513143 ZNF646O15015 1829 aaPredicted RBP15.23■□□□□ 0.03
PDPN-210ENST00000513143 DOCK2Q92608 1830 aa15.23■□□□□ 0.03
PDPN-210ENST00000513143 MYH7P12883 1935 aa15.23■□□□□ 0.03
PDPN-210ENST00000513143 TRIM6-TRIM34B2RNG4 842 aa15.22■□□□□ 0.03
PDPN-210ENST00000513143 GOLIM4O00461 696 aa15.22■□□□□ 0.03
PDPN-210ENST00000513143 TTF1Q15361 905 aaPredicted RBP15.22■□□□□ 0.03
PDPN-210ENST00000513143 ANTXR1Q9H6X2 564 aa15.22■□□□□ 0.03
PDPN-210ENST00000513143 YDJCA8MPS7 323 aa15.21■□□□□ 0.03
PDPN-210ENST00000513143 GRIN3BO60391 1043 aa15.21■□□□□ 0.03
PDPN-210ENST00000513143 LMNB1P20700 586 aa15.21■□□□□ 0.03
PDPN-210ENST00000513143 CHAF1AQ13111 956 aaPredicted RBP15.21■□□□□ 0.03
PDPN-210ENST00000513143 NIM1KQ8IY84 436 aa15.21■□□□□ 0.03
PDPN-210ENST00000513143 WDR66Q8TBY9 1149 aa15.21■□□□□ 0.03
PDPN-210ENST00000513143 RILPL2Q969X0 211 aa15.21■□□□□ 0.03
PDPN-210ENST00000513143 SALL1Q9NSC2 1324 aa15.21■□□□□ 0.03
PDPN-210ENST00000513143 GTF2IP78347 998 aa15.2■□□□□ 0.02
PDPN-210ENST00000513143 TTLL5Q6EMB2 1281 aa15.2■□□□□ 0.02
PDPN-210ENST00000513143 TICAM2Q86XR7 235 aa15.2■□□□□ 0.02
PDPN-210ENST00000513143 KBTBD3Q8NAB2 608 aa15.2■□□□□ 0.02
PDPN-210ENST00000513143 JDP2Q8WYK2 163 aa15.2■□□□□ 0.02
PDPN-210ENST00000513143 PIH1D3Q9NQM4 214 aaKnown RBP15.2■□□□□ 0.02
PDPN-210ENST00000513143 KCNQ5Q9NR82 932 aa15.2■□□□□ 0.02
PDPN-210ENST00000513143 ZNRF3Q9ULT6 936 aa15.2■□□□□ 0.02
PDPN-210ENST00000513143 STRIP1Q5VSL9 837 aa15.19■□□□□ 0.02
PDPN-210ENST00000513143 TBC1D9Q6ZT07 1266 aa15.19■□□□□ 0.02
PDPN-210ENST00000513143 ZGPATQ8N5A5 531 aaKnown RBP15.19■□□□□ 0.02
PDPN-210ENST00000513143 TBC1D22AQ8WUA7 517 aa15.19■□□□□ 0.02
PDPN-210ENST00000513143 JAG2Q9Y219 1238 aa15.19■□□□□ 0.02
PDPN-210ENST00000513143 RFX7Q2KHR2 1363 aa15.19■□□□□ 0.02
PDPN-210ENST00000513143 USP17L3A6NCW0 530 aa15.18■□□□□ 0.02
PDPN-210ENST00000513143 USP17L4A6NCW7 530 aa15.18■□□□□ 0.02
PDPN-210ENST00000513143 IGSF3O75054 1194 aa15.18■□□□□ 0.02
PDPN-210ENST00000513143 FKBP1AP62942 108 aaKnown RBP15.18■□□□□ 0.02
PDPN-210ENST00000513143 USP17L1Q7RTZ2 530 aa15.18■□□□□ 0.02
PDPN-210ENST00000513143 FSD1Q9BTV5 496 aa15.18■□□□□ 0.02
PDPN-210ENST00000513143 ABCF2Q9UG63 623 aa15.18■□□□□ 0.02
PDPN-210ENST00000513143 UTRNP46939 3433 aa15.18■□□□□ 0.02
PDPN-210ENST00000513143 MFSD14BQ5SR56 506 aa15.17■□□□□ 0.02
PDPN-210ENST00000513143 DACT2Q5SW24 774 aa15.17■□□□□ 0.02
PDPN-210ENST00000513143 SPTY2D1Q68D10 685 aaPredicted RBP15.17■□□□□ 0.02
PDPN-210ENST00000513143 LRP2BPQ9P2M1 347 aa15.17■□□□□ 0.02
PDPN-210ENST00000513143 FZD9O00144 591 aa15.17■□□□□ 0.02
PDPN-210ENST00000513143 IDH1O75874 414 aaKnown RBP15.17■□□□□ 0.02
PDPN-210ENST00000513143 VIL1P09327 827 aaKnown RBP15.17■□□□□ 0.02
PDPN-210ENST00000513143 MAP3K12Q12852 859 aa15.17■□□□□ 0.02
PDPN-210ENST00000513143 LRRFIP1Q32MZ4 808 aaKnown RBP15.17■□□□□ 0.02
PDPN-210ENST00000513143 ERICH6Q7L0X2 663 aa15.17■□□□□ 0.02
PDPN-210ENST00000513143 FBXW7Q969H0 707 aa15.17■□□□□ 0.02
PDPN-210ENST00000513143 DDX24Q9GZR7 859 aaKnown RBP eCLIP15.17■□□□□ 0.02
PDPN-210ENST00000513143 SUGT1Q9Y2Z0 365 aa15.17■□□□□ 0.02
PDPN-210ENST00000513143 MAST2Q6P0Q8 1798 aa15.16■□□□□ 0.02
PDPN-210ENST00000513143 TIAM2Q8IVF5 1701 aa15.16■□□□□ 0.02
PDPN-210ENST00000513143 HIP1O00291 1037 aa15.16■□□□□ 0.02
PDPN-210ENST00000513143 PSMD14O00487 310 aa15.16■□□□□ 0.02
PDPN-210ENST00000513143 CDC45O75419 566 aa15.16■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms