RNA–Protein interactions for RNA: ENST00000513139.1

SPCS3-204, Transcript of signal peptidase complex subunit 3, humanhuman

TSL 2

Gene SPCS3, Length 589 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPCS3-204ENST00000513139 ZNF804BA4D1E1 1349 aa17.91■□□□□ 0.46
SPCS3-204ENST00000513139 MYBBP1AQ9BQG0 1328 aaKnown RBP17.91■□□□□ 0.46
SPCS3-204ENST00000513139 SSC5DA1L4H1 1573 aa17.91■□□□□ 0.46
SPCS3-204ENST00000513139 IGKV5-2P06315 115 aa17.9■□□□□ 0.46
SPCS3-204ENST00000513139 IGHMBP2P38935 993 aaKnown RBP17.9■□□□□ 0.46
SPCS3-204ENST00000513139 GTF2IP78347 998 aa17.9■□□□□ 0.46
SPCS3-204ENST00000513139 CALD1Q05682 793 aaKnown RBP17.9■□□□□ 0.46
SPCS3-204ENST00000513139 SUPT20HL1Q3ZLR7 823 aa17.9■□□□□ 0.46
SPCS3-204ENST00000513139 CCDC30Q5VVM6 783 aa17.9■□□□□ 0.46
SPCS3-204ENST00000513139 KSR2Q6VAB6 950 aa17.9■□□□□ 0.46
SPCS3-204ENST00000513139 CLMNQ96JQ2 1002 aa17.9■□□□□ 0.46
SPCS3-204ENST00000513139 TRIOBPQ9H2D6 2365 aa17.9■□□□□ 0.46
SPCS3-204ENST00000513139 OTOFQ9HC10 1997 aa17.9■□□□□ 0.46
SPCS3-204ENST00000513139 ELL2O00472 640 aaPredicted RBP17.89■□□□□ 0.45
SPCS3-204ENST00000513139 DSG3P32926 999 aa17.89■□□□□ 0.45
SPCS3-204ENST00000513139 CRHR2Q13324 411 aa17.89■□□□□ 0.45
SPCS3-204ENST00000513139 CD99L2Q8TCZ2 262 aa17.89■□□□□ 0.45
SPCS3-204ENST00000513139 EFCC1Q9HA90 598 aa17.89■□□□□ 0.45
SPCS3-204ENST00000513139 FZD1Q9UP38 647 aa17.89■□□□□ 0.45
SPCS3-204ENST00000513139 ADAMTS8Q9UP79 889 aa17.89■□□□□ 0.45
SPCS3-204ENST00000513139 CACNA1FO60840 1977 aa17.89■□□□□ 0.45
SPCS3-204ENST00000513139 A0A1B0GUL6 1792 aa17.89■□□□□ 0.45
SPCS3-204ENST00000513139 TESPA1A2RU30 521 aaPredicted RBP17.88■□□□□ 0.45
SPCS3-204ENST00000513139 MYO1BO43795 1136 aa17.88■□□□□ 0.45
SPCS3-204ENST00000513139 EN2P19622 333 aaPredicted RBP17.88■□□□□ 0.45
SPCS3-204ENST00000513139 SP3Q02447 781 aa17.88■□□□□ 0.45
SPCS3-204ENST00000513139 NEXNQ0ZGT2 675 aa17.88■□□□□ 0.45
SPCS3-204ENST00000513139 PI4KAP2A4QPH2 592 aa17.87■□□□□ 0.45
SPCS3-204ENST00000513139 IREB2P48200 963 aaKnown RBP17.87■□□□□ 0.45
SPCS3-204ENST00000513139 PI4KAP1Q8N8J0 262 aa17.87■□□□□ 0.45
SPCS3-204ENST00000513139 C8orf58Q8NAV2 365 aa17.87■□□□□ 0.45
SPCS3-204ENST00000513139 TMEM106CQ9BVX2 250 aa17.87■□□□□ 0.45
SPCS3-204ENST00000513139 CD209Q9NNX6 404 aa17.87■□□□□ 0.45
SPCS3-204ENST00000513139 SZT2Q5T011 3432 aa17.86■□□□□ 0.45
SPCS3-204ENST00000513139 H7C1W4 665 aa17.86■□□□□ 0.45
SPCS3-204ENST00000513139 KLRK1P26718 216 aa17.86■□□□□ 0.45
SPCS3-204ENST00000513139 ARHGEF6Q15052 776 aa17.86■□□□□ 0.45
SPCS3-204ENST00000513139 C15orf52Q6ZUT6 534 aaKnown RBP17.86■□□□□ 0.45
SPCS3-204ENST00000513139 ANKRD13AQ8IZ07 590 aa17.86■□□□□ 0.45
SPCS3-204ENST00000513139 MPHOSPH8Q99549 860 aa17.86■□□□□ 0.45
SPCS3-204ENST00000513139 PLA2G12BQ9BX93 195 aa17.86■□□□□ 0.45
SPCS3-204ENST00000513139 SPDYE2BA6NHP3 402 aa17.85■□□□□ 0.45
SPCS3-204ENST00000513139 NEURL1BA8MQ27 555 aa17.85■□□□□ 0.45
SPCS3-204ENST00000513139 USP2O75604 605 aaPredicted RBP17.85■□□□□ 0.45
SPCS3-204ENST00000513139 SPDYE6P0CI01 402 aa17.85■□□□□ 0.45
SPCS3-204ENST00000513139 ITGA6P23229 1130 aa17.85■□□□□ 0.45
SPCS3-204ENST00000513139 GJA5P36382 358 aa17.85■□□□□ 0.45
SPCS3-204ENST00000513139 KCNJ4P48050 445 aa17.85■□□□□ 0.45
SPCS3-204ENST00000513139 FKBP1AP62942 108 aaKnown RBP17.85■□□□□ 0.45
SPCS3-204ENST00000513139 NBPF11Q86T75 865 aa17.85■□□□□ 0.45
SPCS3-204ENST00000513139 CERS5Q8N5B7 392 aa17.85■□□□□ 0.45
SPCS3-204ENST00000513139 ZNF333Q96JL9 665 aa17.85■□□□□ 0.45
SPCS3-204ENST00000513139 PTPN18Q99952 460 aa17.85■□□□□ 0.45
SPCS3-204ENST00000513139 IRS2Q9Y4H2 1338 aa17.84■□□□□ 0.45
SPCS3-204ENST00000513139 CWF19L2Q2TBE0 894 aaKnown RBP17.84■□□□□ 0.45
SPCS3-204ENST00000513139 NBPF12Q5TAG4 269 aaPredicted RBP17.84■□□□□ 0.45
SPCS3-204ENST00000513139 UBE3BQ7Z3V4 1068 aa17.84■□□□□ 0.45
SPCS3-204ENST00000513139 RANBP2P49792 3224 aaKnown RBP17.83■□□□□ 0.44
SPCS3-204ENST00000513139 CSF1RP07333 972 aa17.83■□□□□ 0.44
SPCS3-204ENST00000513139 CHRNDQ07001 517 aa17.83■□□□□ 0.44
SPCS3-204ENST00000513139 CFAP100Q494V2 611 aa17.83■□□□□ 0.44
SPCS3-204ENST00000513139 PRMT6Q96LA8 375 aaPredicted RBP17.83■□□□□ 0.44
SPCS3-204ENST00000513139 ZBTB4Q9P1Z0 1013 aaPredicted RBP17.83■□□□□ 0.44
SPCS3-204ENST00000513139 COLQQ9Y215 455 aaPredicted RBP17.83■□□□□ 0.44
SPCS3-204ENST00000513139 IL1R1P14778 569 aa17.82■□□□□ 0.44
SPCS3-204ENST00000513139 CAP1Q01518 475 aa17.82■□□□□ 0.44
SPCS3-204ENST00000513139 SLC9C1Q4G0N8 1177 aa17.82■□□□□ 0.44
SPCS3-204ENST00000513139 MS4A4AQ96JQ5 239 aa17.82■□□□□ 0.44
SPCS3-204ENST00000513139 PCDHAC2Q9Y5I4 1007 aa17.82■□□□□ 0.44
SPCS3-204ENST00000513139 CLRN2A0PK11 232 aa17.81■□□□□ 0.44
SPCS3-204ENST00000513139 RASA3Q14644 834 aa17.81■□□□□ 0.44
SPCS3-204ENST00000513139 ZNF804AQ7Z570 1209 aa17.81■□□□□ 0.44
SPCS3-204ENST00000513139 STK31Q9BXU1 1019 aa17.81■□□□□ 0.44
SPCS3-204ENST00000513139 VEZTQ9HBM0 779 aa17.81■□□□□ 0.44
SPCS3-204ENST00000513139 ARAP2Q8WZ64 1704 aa17.81■□□□□ 0.44
SPCS3-204ENST00000513139 ZNF316A6NFI3 1004 aaPredicted RBP17.8■□□□□ 0.44
SPCS3-204ENST00000513139 APAF1O14727 1248 aa17.8■□□□□ 0.44
SPCS3-204ENST00000513139 TNFAIP1Q13829 316 aa17.8■□□□□ 0.44
SPCS3-204ENST00000513139 GCKRQ14397 625 aa17.8■□□□□ 0.44
SPCS3-204ENST00000513139 OPTNQ96CV9 577 aa17.8■□□□□ 0.44
SPCS3-204ENST00000513139 F8W031 263 aaPredicted RBP17.79■□□□□ 0.44
SPCS3-204ENST00000513139 CASP7P55210 303 aa17.79■□□□□ 0.44
SPCS3-204ENST00000513139 TSPYL6Q8N831 410 aa17.79■□□□□ 0.44
SPCS3-204ENST00000513139 ZFYVE28Q9HCC9 887 aa17.79■□□□□ 0.44
SPCS3-204ENST00000513139 PTCH2Q9Y6C5 1203 aa17.79■□□□□ 0.44
SPCS3-204ENST00000513139 ANKRD18BA2A2Z9 1011 aa17.78■□□□□ 0.44
SPCS3-204ENST00000513139 GTF2A2P52657 109 aa17.78■□□□□ 0.44
SPCS3-204ENST00000513139 TAF1CQ15572 869 aaPredicted RBP17.78■□□□□ 0.44
SPCS3-204ENST00000513139 SLC4A8Q2Y0W8 1093 aa17.78■□□□□ 0.44
SPCS3-204ENST00000513139 MYH16Q9H6N6 1097 aa17.78■□□□□ 0.44
SPCS3-204ENST00000513139 ELP3Q9H9T3 547 aa17.78■□□□□ 0.44
SPCS3-204ENST00000513139 SNAP23O00161 211 aa17.77■□□□□ 0.44
SPCS3-204ENST00000513139 RBM5P52756 815 aaKnown RBP eCLIP17.77■□□□□ 0.44
SPCS3-204ENST00000513139 SPDYE2Q495Y8 402 aa17.77■□□□□ 0.44
SPCS3-204ENST00000513139 BRI3BPQ8WY22 251 aa17.77■□□□□ 0.44
SPCS3-204ENST00000513139 OTUD5Q96G74 571 aa17.77■□□□□ 0.44
SPCS3-204ENST00000513139 AOX1Q06278 1338 aa17.76■□□□□ 0.43
SPCS3-204ENST00000513139 CCL15-CCL14A0A0B4J2E2 113 aa17.76■□□□□ 0.43
SPCS3-204ENST00000513139 TAF5LO75529 589 aa17.76■□□□□ 0.43
SPCS3-204ENST00000513139 WDHD1O75717 1129 aaPredicted RBP17.76■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 56.2 ms