RNA–Protein interactions for RNA: ENST00000512925.1

PFDN1-205, Transcript of prefoldin subunit 1, humanhuman

TSL 2

Gene PFDN1, Length 900 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PFDN1-205ENST00000512925 PTPN18Q99952 460 aa13.44□□□□□ -0.26
PFDN1-205ENST00000512925 GREM2Q9H772 168 aa13.44□□□□□ -0.26
PFDN1-205ENST00000512925 COLQQ9Y215 455 aaPredicted RBP13.44□□□□□ -0.26
PFDN1-205ENST00000512925 IGKV5-2P06315 115 aa13.43□□□□□ -0.26
PFDN1-205ENST00000512925 GJA5P36382 358 aa13.43□□□□□ -0.26
PFDN1-205ENST00000512925 CRHR2Q13324 411 aa13.43□□□□□ -0.26
PFDN1-205ENST00000512925 RUNDC1Q96C34 613 aa13.43□□□□□ -0.26
PFDN1-205ENST00000512925 FBXO3Q9UK99 471 aa13.43□□□□□ -0.26
PFDN1-205ENST00000512925 LEMD3Q9Y2U8 911 aa13.43□□□□□ -0.26
PFDN1-205ENST00000512925 PCDHAC2Q9Y5I4 1007 aa13.43□□□□□ -0.26
PFDN1-205ENST00000512925 COL1A1P02452 1464 aaPredicted RBP13.42□□□□□ -0.26
PFDN1-205ENST00000512925 TESPA1A2RU30 521 aaPredicted RBP13.42□□□□□ -0.26
PFDN1-205ENST00000512925 UNCXA6NJT0 531 aa13.42□□□□□ -0.26
PFDN1-205ENST00000512925 ELL2O00472 640 aaPredicted RBP13.42□□□□□ -0.26
PFDN1-205ENST00000512925 GTF2IP78347 998 aa13.42□□□□□ -0.26
PFDN1-205ENST00000512925 CERS5Q8N5B7 392 aa13.42□□□□□ -0.26
PFDN1-205ENST00000512925 MTMR14Q8NCE2 650 aa13.42□□□□□ -0.26
PFDN1-205ENST00000512925 EFCC1Q9HA90 598 aa13.42□□□□□ -0.26
PFDN1-205ENST00000512925 ZBTB4Q9P1Z0 1013 aaPredicted RBP13.42□□□□□ -0.26
PFDN1-205ENST00000512925 RBBP6Q7Z6E9 1792 aaKnown RBP13.42□□□□□ -0.26
PFDN1-205ENST00000512925 ZNF804BA4D1E1 1349 aa13.41□□□□□ -0.26
PFDN1-205ENST00000512925 PPP1R12BO60237 982 aaPredicted RBP13.41□□□□□ -0.26
PFDN1-205ENST00000512925 USP2O75604 605 aaPredicted RBP13.41□□□□□ -0.26
PFDN1-205ENST00000512925 SP3Q02447 781 aa13.41□□□□□ -0.26
PFDN1-205ENST00000512925 ZNF333Q96JL9 665 aa13.41□□□□□ -0.26
PFDN1-205ENST00000512925 MAP3K2Q9Y2U5 619 aa13.41□□□□□ -0.26
PFDN1-205ENST00000512925 AOX1Q06278 1338 aa13.4□□□□□ -0.26
PFDN1-205ENST00000512925 IRS2Q9Y4H2 1338 aa13.4□□□□□ -0.26
PFDN1-205ENST00000512925 EVX2Q03828 476 aa13.4□□□□□ -0.26
PFDN1-205ENST00000512925 RALBP1Q15311 655 aa13.4□□□□□ -0.26
PFDN1-205ENST00000512925 DLGAP5Q15398 846 aa13.4□□□□□ -0.26
PFDN1-205ENST00000512925 NBPF12Q5TAG4 269 aaPredicted RBP13.4□□□□□ -0.26
PFDN1-205ENST00000512925 C8orf58Q8NAV2 365 aa13.4□□□□□ -0.26
PFDN1-205ENST00000512925 CD209Q9NNX6 404 aa13.4□□□□□ -0.26
PFDN1-205ENST00000512925 PPP2R3BQ9Y5P8 575 aa13.4□□□□□ -0.26
PFDN1-205ENST00000512925 RANBP2P49792 3224 aaKnown RBP13.39□□□□□ -0.27
PFDN1-205ENST00000512925 KSR2Q6VAB6 950 aa13.39□□□□□ -0.27
PFDN1-205ENST00000512925 OTUD5Q96G74 571 aa13.39□□□□□ -0.27
PFDN1-205ENST00000512925 PRMT6Q96LA8 375 aaPredicted RBP13.39□□□□□ -0.27
PFDN1-205ENST00000512925 ADAMTS8Q9UP79 889 aa13.39□□□□□ -0.27
PFDN1-205ENST00000512925 LAMB1P07942 1786 aa13.39□□□□□ -0.27
PFDN1-205ENST00000512925 PI4KAP2A4QPH2 592 aa13.38□□□□□ -0.27
PFDN1-205ENST00000512925 H7C1W4 665 aa13.38□□□□□ -0.27
PFDN1-205ENST00000512925 SNAP23O00161 211 aa13.38□□□□□ -0.27
PFDN1-205ENST00000512925 DDX58O95786 925 aaKnown RBP13.38□□□□□ -0.27
PFDN1-205ENST00000512925 ZEB1P37275 1124 aaPredicted RBP13.38□□□□□ -0.27
PFDN1-205ENST00000512925 SUPT20HL1Q3ZLR7 823 aa13.38□□□□□ -0.27
PFDN1-205ENST00000512925 OTUD7BQ6GQQ9 843 aa13.38□□□□□ -0.27
PFDN1-205ENST00000512925 PI4KAP1Q8N8J0 262 aa13.38□□□□□ -0.27
PFDN1-205ENST00000512925 MS4A4AQ96JQ5 239 aa13.38□□□□□ -0.27
PFDN1-205ENST00000512925 TMEM106CQ9BVX2 250 aa13.38□□□□□ -0.27
PFDN1-205ENST00000512925 ANKRD2Q9GZV1 360 aa13.38□□□□□ -0.27
PFDN1-205ENST00000512925 IFT57Q9NWB7 429 aa13.38□□□□□ -0.27
PFDN1-205ENST00000512925 CLRN2A0PK11 232 aa13.37□□□□□ -0.27
PFDN1-205ENST00000512925 NEURL1BA8MQ27 555 aa13.37□□□□□ -0.27
PFDN1-205ENST00000512925 IGHMBP2P38935 993 aaKnown RBP13.37□□□□□ -0.27
PFDN1-205ENST00000512925 CWF19L2Q2TBE0 894 aaKnown RBP13.37□□□□□ -0.27
PFDN1-205ENST00000512925 CFAP100Q494V2 611 aa13.37□□□□□ -0.27
PFDN1-205ENST00000512925 ANKRD13AQ8IZ07 590 aa13.37□□□□□ -0.27
PFDN1-205ENST00000512925 SP7Q8TDD2 431 aaPredicted RBP13.37□□□□□ -0.27
PFDN1-205ENST00000512925 PTCH2Q9Y6C5 1203 aa13.37□□□□□ -0.27
PFDN1-205ENST00000512925 CEP290O15078 2479 aa13.37□□□□□ -0.27
PFDN1-205ENST00000512925 TRIOBPQ9H2D6 2365 aa13.36□□□□□ -0.27
PFDN1-205ENST00000512925 H0YGN5 161 aa13.36□□□□□ -0.27
PFDN1-205ENST00000512925 CSF1RP07333 972 aa13.36□□□□□ -0.27
PFDN1-205ENST00000512925 ITGA6P23229 1130 aa13.36□□□□□ -0.27
PFDN1-205ENST00000512925 IREB2P48200 963 aaKnown RBP13.36□□□□□ -0.27
PFDN1-205ENST00000512925 CHRNDQ07001 517 aa13.36□□□□□ -0.27
PFDN1-205ENST00000512925 PLA2G12BQ9BX93 195 aa13.36□□□□□ -0.27
PFDN1-205ENST00000512925 FARP1Q9Y4F1 1045 aaPredicted RBP13.36□□□□□ -0.27
PFDN1-205ENST00000512925 F8W031 263 aaPredicted RBP13.35□□□□□ -0.27
PFDN1-205ENST00000512925 IL1R1P14778 569 aa13.35□□□□□ -0.27
PFDN1-205ENST00000512925 CASP7P55210 303 aa13.35□□□□□ -0.27
PFDN1-205ENST00000512925 GNAI1P63096 354 aa13.35□□□□□ -0.27
PFDN1-205ENST00000512925 RASA3Q14644 834 aa13.35□□□□□ -0.27
PFDN1-205ENST00000512925 CCDC30Q5VVM6 783 aa13.35□□□□□ -0.27
PFDN1-205ENST00000512925 C15orf52Q6ZUT6 534 aaKnown RBP13.35□□□□□ -0.27
PFDN1-205ENST00000512925 UBE3BQ7Z3V4 1068 aa13.35□□□□□ -0.27
PFDN1-205ENST00000512925 TSPYL6Q8N831 410 aa13.35□□□□□ -0.27
PFDN1-205ENST00000512925 BRI3BPQ8WY22 251 aa13.35□□□□□ -0.27
PFDN1-205ENST00000512925 OPTNQ96CV9 577 aa13.35□□□□□ -0.27
PFDN1-205ENST00000512925 ELP3Q9H9T3 547 aa13.35□□□□□ -0.27
PFDN1-205ENST00000512925 VEZTQ9HBM0 779 aa13.35□□□□□ -0.27
PFDN1-205ENST00000512925 FKBP1AP62942 108 aaKnown RBP13.34□□□□□ -0.27
PFDN1-205ENST00000512925 SLC9C1Q4G0N8 1177 aa13.34□□□□□ -0.27
PFDN1-205ENST00000512925 PPP1R3FQ6ZSY5 799 aaPredicted RBP13.34□□□□□ -0.27
PFDN1-205ENST00000512925 NBPF11Q86T75 865 aa13.34□□□□□ -0.27
PFDN1-205ENST00000512925 CDAN1Q8IWY9 1227 aa13.34□□□□□ -0.27
PFDN1-205ENST00000512925 TEPSINQ96N21 525 aa13.34□□□□□ -0.27
PFDN1-205ENST00000512925 MPHOSPH8Q99549 860 aa13.34□□□□□ -0.27
PFDN1-205ENST00000512925 MYBBP1AQ9BQG0 1328 aaKnown RBP13.34□□□□□ -0.27
PFDN1-205ENST00000512925 SPEF2Q9C093 1822 aa13.34□□□□□ -0.27
PFDN1-205ENST00000512925 MYO1BO43795 1136 aa13.33□□□□□ -0.28
PFDN1-205ENST00000512925 TAF5LO75529 589 aa13.33□□□□□ -0.28
PFDN1-205ENST00000512925 NEXNQ0ZGT2 675 aa13.33□□□□□ -0.28
PFDN1-205ENST00000512925 WDR43Q15061 677 aaKnown RBP eCLIP13.33□□□□□ -0.28
PFDN1-205ENST00000512925 G2E3Q7L622 706 aa13.33□□□□□ -0.28
PFDN1-205ENST00000512925 FAM43AQ8N2R8 423 aa13.33□□□□□ -0.28
PFDN1-205ENST00000512925 JAG2Q9Y219 1238 aa13.33□□□□□ -0.28
PFDN1-205ENST00000512925 C19orf67A6NJJ6 358 aa13.32□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms