RNA–Protein interactions for RNA: ENST00000512844.5

CHD1-209, Transcript of chromodomain helicase DNA binding protein 1, humanhuman

TSL 5

Gene CHD1, Length 848 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD1-209ENST00000512844 SRCIN1Q9C0H9 1055 aa9.32□□□□□ -0.92
CHD1-209ENST00000512844 SEC31BQ9NQW1 1179 aa9.32□□□□□ -0.92
CHD1-209ENST00000512844 USP21Q9UK80 565 aa9.32□□□□□ -0.92
CHD1-209ENST00000512844 SOX13Q9UN79 622 aa9.32□□□□□ -0.92
CHD1-209ENST00000512844 METTL12A8MUP2 240 aa9.31□□□□□ -0.92
CHD1-209ENST00000512844 FSCN2O14926 492 aa9.31□□□□□ -0.92
CHD1-209ENST00000512844 PRPF40BQ6NWY9 871 aaKnown RBP9.31□□□□□ -0.92
CHD1-209ENST00000512844 PI16Q6UXB8 463 aa9.31□□□□□ -0.92
CHD1-209ENST00000512844 CLEC4MQ9H2X3 399 aaPredicted RBP9.31□□□□□ -0.92
CHD1-209ENST00000512844 WWC3Q9ULE0 1092 aa9.31□□□□□ -0.92
CHD1-209ENST00000512844 TMEM238LA0A1B0GVL6 79 aa9.3□□□□□ -0.92
CHD1-209ENST00000512844 C9orf172C9J069 976 aa9.3□□□□□ -0.92
CHD1-209ENST00000512844 XRCC5P13010 732 aaKnown RBP9.3□□□□□ -0.92
CHD1-209ENST00000512844 FCGRTP55899 365 aa9.3□□□□□ -0.92
CHD1-209ENST00000512844 NRG1Q02297 640 aaPredicted RBP9.3□□□□□ -0.92
CHD1-209ENST00000512844 GRIK4Q16099 956 aa9.3□□□□□ -0.92
CHD1-209ENST00000512844 ZNF326Q5BKZ1 582 aaKnown RBP9.3□□□□□ -0.92
CHD1-209ENST00000512844 CARD10Q9BWT7 1032 aa9.3□□□□□ -0.92
CHD1-209ENST00000512844 BCL2L13Q9BXK5 485 aa9.3□□□□□ -0.92
CHD1-209ENST00000512844 OSGEPQ9NPF4 335 aa9.3□□□□□ -0.92
CHD1-209ENST00000512844 CCDC9Q9Y3X0 531 aaKnown RBP9.3□□□□□ -0.92
CHD1-209ENST00000512844 GRIA4P48058 902 aa9.29□□□□□ -0.92
CHD1-209ENST00000512844 PCDH1Q08174 1060 aa9.29□□□□□ -0.92
CHD1-209ENST00000512844 C19orf57Q0VDD7 668 aa9.29□□□□□ -0.92
CHD1-209ENST00000512844 SETDB1Q15047 1291 aa9.29□□□□□ -0.92
CHD1-209ENST00000512844 SPRED3Q2MJR0 410 aa9.29□□□□□ -0.92
CHD1-209ENST00000512844 GNA15P30679 374 aa9.28□□□□□ -0.92
CHD1-209ENST00000512844 GSTT1P30711 240 aa9.28□□□□□ -0.92
CHD1-209ENST00000512844 CD68P34810 354 aaPredicted RBP9.28□□□□□ -0.92
CHD1-209ENST00000512844 PTPN12Q05209 780 aaKnown RBP9.28□□□□□ -0.92
CHD1-209ENST00000512844 IGF2-ASQ6U949 168 aa9.28□□□□□ -0.92
CHD1-209ENST00000512844 NXPE4Q6UWF7 544 aa9.28□□□□□ -0.92
CHD1-209ENST00000512844 SETDB2Q96T68 719 aa9.28□□□□□ -0.92
CHD1-209ENST00000512844 DUSP9Q99956 384 aaKnown RBP9.28□□□□□ -0.92
CHD1-209ENST00000512844 MRS2Q9HD23 443 aa9.28□□□□□ -0.92
CHD1-209ENST00000512844 ABCB6Q9NP58 842 aa9.28□□□□□ -0.92
CHD1-209ENST00000512844 AKAP2Q9Y2D5 859 aa9.28□□□□□ -0.92
CHD1-209ENST00000512844 DEAF1O75398 565 aaPredicted RBP9.27□□□□□ -0.93
CHD1-209ENST00000512844 EIF4BP23588 611 aaKnown RBP9.27□□□□□ -0.93
CHD1-209ENST00000512844 PSMD2Q13200 908 aa9.27□□□□□ -0.93
CHD1-209ENST00000512844 SUZ12Q15022 739 aaKnown RBP9.27□□□□□ -0.93
CHD1-209ENST00000512844 VN1R5Q7Z5H4 357 aa9.27□□□□□ -0.93
CHD1-209ENST00000512844 MRPL18Q9H0U6 180 aaKnown RBP9.27□□□□□ -0.93
CHD1-209ENST00000512844 ESRRAP11474 423 aaPredicted RBP9.26□□□□□ -0.93
CHD1-209ENST00000512844 ITPKAP23677 461 aa9.26□□□□□ -0.93
CHD1-209ENST00000512844 GSTM4Q03013 218 aa9.26□□□□□ -0.93
CHD1-209ENST00000512844 RPS26P11Q5JNZ5 115 aaPredicted RBP9.26□□□□□ -0.93
CHD1-209ENST00000512844 ADAMTSL4Q6UY14 1074 aa9.26□□□□□ -0.93
CHD1-209ENST00000512844 ZNF576Q9H609 170 aa9.26□□□□□ -0.93
CHD1-209ENST00000512844 C12orf49Q9H741 205 aa9.26□□□□□ -0.93
CHD1-209ENST00000512844 FAM8A1Q9UBU6 413 aa9.26□□□□□ -0.93
CHD1-209ENST00000512844 KRBA1A5PL33 1030 aa9.25□□□□□ -0.93
CHD1-209ENST00000512844 DLL1O00548 723 aa9.25□□□□□ -0.93
CHD1-209ENST00000512844 GSK3AP49840 483 aa9.25□□□□□ -0.93
CHD1-209ENST00000512844 HNRNPUQ00839 825 aaKnown RBP eCLIP9.25□□□□□ -0.93
CHD1-209ENST00000512844 PPP2R3AQ06190 1150 aa9.25□□□□□ -0.93
CHD1-209ENST00000512844 GIPC2Q8TF65 315 aa9.25□□□□□ -0.93
CHD1-209ENST00000512844 LENG1Q96BZ8 264 aaPredicted RBP9.25□□□□□ -0.93
CHD1-209ENST00000512844 SOX17Q9H6I2 414 aaPredicted RBP9.25□□□□□ -0.93
CHD1-209ENST00000512844 GPN3Q9UHW5 284 aaPredicted RBP9.25□□□□□ -0.93
CHD1-209ENST00000512844 SOX1O00570 391 aaPredicted RBP9.24□□□□□ -0.93
CHD1-209ENST00000512844 NLRP12P59046 1061 aa9.24□□□□□ -0.93
CHD1-209ENST00000512844 DUOXA2Q1HG44 320 aa9.24□□□□□ -0.93
CHD1-209ENST00000512844 SHISA2Q6UWI4 295 aa9.24□□□□□ -0.93
CHD1-209ENST00000512844 ILDR2Q71H61 639 aa9.24□□□□□ -0.93
CHD1-209ENST00000512844 KLHDC7BQ96G42 594 aa9.24□□□□□ -0.93
CHD1-209ENST00000512844 USP26Q9BXU7 913 aa9.24□□□□□ -0.93
CHD1-209ENST00000512844 PARP2Q9UGN5 583 aa9.24□□□□□ -0.93
CHD1-209ENST00000512844 HP1BP3Q5SSJ5 553 aaPredicted RBP9.23□□□□□ -0.93
CHD1-209ENST00000512844 FBXO33Q7Z6M2 555 aa9.23□□□□□ -0.93
CHD1-209ENST00000512844 GALNT11Q8NCW6 608 aa9.23□□□□□ -0.93
CHD1-209ENST00000512844 GLIS3Q8NEA6 775 aa9.23□□□□□ -0.93
CHD1-209ENST00000512844 C1QTNF9BB2RNN3 333 aa9.22□□□□□ -0.93
CHD1-209ENST00000512844 CYP11A1P05108 521 aa9.22□□□□□ -0.93
CHD1-209ENST00000512844 USP17L7P0C7H9 530 aa9.22□□□□□ -0.93
CHD1-209ENST00000512844 SELPP16109 830 aa9.22□□□□□ -0.93
CHD1-209ENST00000512844 PLA2G4EQ3MJ16 856 aa9.22□□□□□ -0.93
CHD1-209ENST00000512844 ACAD11Q709F0 780 aa9.22□□□□□ -0.93
CHD1-209ENST00000512844 OSBPL7Q9BZF2 842 aa9.22□□□□□ -0.93
CHD1-209ENST00000512844 CEP44Q9C0F1 390 aa9.22□□□□□ -0.93
CHD1-209ENST00000512844 PPM1HQ9ULR3 514 aa9.22□□□□□ -0.93
CHD1-209ENST00000512844 B3GALT4O96024 378 aa9.21□□□□□ -0.94
CHD1-209ENST00000512844 GATA4P43694 442 aa9.21□□□□□ -0.94
CHD1-209ENST00000512844 FOXD4L6Q3SYB3 417 aaPredicted RBP9.21□□□□□ -0.94
CHD1-209ENST00000512844 FOXD4L3Q6VB84 417 aaPredicted RBP9.21□□□□□ -0.94
CHD1-209ENST00000512844 CD163Q86VB7 1156 aa9.21□□□□□ -0.94
CHD1-209ENST00000512844 CORO1BQ9BR76 489 aa9.21□□□□□ -0.94
CHD1-209ENST00000512844 AKTIPQ9H8T0 292 aa9.21□□□□□ -0.94
CHD1-209ENST00000512844 VTI1BQ9UEU0 232 aa9.21□□□□□ -0.94
CHD1-209ENST00000512844 TTF2Q9UNY4 1162 aaKnown RBP9.21□□□□□ -0.94
CHD1-209ENST00000512844 AK5Q9Y6K8 562 aa9.21□□□□□ -0.94
CHD1-209ENST00000512844 SORBS3O60504 671 aa9.2□□□□□ -0.94
CHD1-209ENST00000512844 CHRNA4P43681 627 aa9.2□□□□□ -0.94
CHD1-209ENST00000512844 AP3B2Q13367 1082 aa9.2□□□□□ -0.94
CHD1-209ENST00000512844 ZNF423Q2M1K9 1284 aa9.2□□□□□ -0.94
CHD1-209ENST00000512844 GPAT2Q6NUI2 795 aa9.2□□□□□ -0.94
CHD1-209ENST00000512844 TMEM39AQ9NV64 488 aa9.2□□□□□ -0.94
CHD1-209ENST00000512844 SAMM50Q9Y512 469 aa9.2□□□□□ -0.94
CHD1-209ENST00000512844 DDX3YO15523 660 aaKnown RBP9.19□□□□□ -0.94
CHD1-209ENST00000512844 ZNF157P51786 506 aaPredicted RBP9.19□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 148.3 ms