RNA–Protein interactions for RNA: ENST00000512332.5

CPNE4-210, Transcript of copine 4, humanhuman

TSL 1 (best) BASIC

Gene CPNE4, Length 2,230 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE4-210ENST00000512332 ADD2P35612 726 aa10.82□□□□□ -0.68
CPNE4-210ENST00000512332 ZNF165P49910 485 aa10.82□□□□□ -0.68
CPNE4-210ENST00000512332 HLFQ16534 295 aa10.82□□□□□ -0.68
CPNE4-210ENST00000512332 LUZP1Q86V48 1076 aa10.82□□□□□ -0.68
CPNE4-210ENST00000512332 ENGASEQ8NFI3 743 aa10.82□□□□□ -0.68
CPNE4-210ENST00000512332 ZNF830Q96NB3 372 aaPredicted RBP10.82□□□□□ -0.68
CPNE4-210ENST00000512332 USP28Q96RU2 1077 aa10.82□□□□□ -0.68
CPNE4-210ENST00000512332 ZNF330Q9Y3S2 320 aaPredicted RBP10.82□□□□□ -0.68
CPNE4-210ENST00000512332 A0A1W2PQ27 194 aa10.81□□□□□ -0.68
CPNE4-210ENST00000512332 A0A1W2PQ64 194 aa10.81□□□□□ -0.68
CPNE4-210ENST00000512332 A0A1W2PQD8 194 aa10.81□□□□□ -0.68
CPNE4-210ENST00000512332 ZNF213O14771 459 aa10.81□□□□□ -0.68
CPNE4-210ENST00000512332 GPAA1O43292 621 aa10.81□□□□□ -0.68
CPNE4-210ENST00000512332 PRC1O43663 620 aa10.81□□□□□ -0.68
CPNE4-210ENST00000512332 PDE8AO60658 829 aa10.81□□□□□ -0.68
CPNE4-210ENST00000512332 PDE8BO95263 885 aa10.81□□□□□ -0.68
CPNE4-210ENST00000512332 ITGB4P16144 1822 aa10.81□□□□□ -0.68
CPNE4-210ENST00000512332 IL6STP40189 918 aaPredicted RBP10.81□□□□□ -0.68
CPNE4-210ENST00000512332 MCAMP43121 646 aa10.81□□□□□ -0.68
CPNE4-210ENST00000512332 PLCB2Q00722 1185 aa10.81□□□□□ -0.68
CPNE4-210ENST00000512332 FAM160A1Q05DH4 1040 aa10.81□□□□□ -0.68
CPNE4-210ENST00000512332 SNW1Q13573 536 aaKnown RBP10.81□□□□□ -0.68
CPNE4-210ENST00000512332 ILDR1Q86SU0 546 aaPredicted RBP10.81□□□□□ -0.68
CPNE4-210ENST00000512332 PLA2G4DQ86XP0 818 aa10.81□□□□□ -0.68
CPNE4-210ENST00000512332 CCAR1Q8IX12 1150 aaKnown RBP10.81□□□□□ -0.68
CPNE4-210ENST00000512332 ZNF335Q9H4Z2 1342 aaPredicted RBP10.81□□□□□ -0.68
CPNE4-210ENST00000512332 GREM2Q9H772 168 aa10.81□□□□□ -0.68
CPNE4-210ENST00000512332 AKAP11Q9UKA4 1901 aa10.81□□□□□ -0.68
CPNE4-210ENST00000512332 IRS4O14654 1257 aaPredicted RBP10.81□□□□□ -0.68
CPNE4-210ENST00000512332 ARID4AP29374 1257 aaPredicted RBP10.81□□□□□ -0.68
CPNE4-210ENST00000512332 ADALQ6DHV7 355 aa10.81□□□□□ -0.68
CPNE4-210ENST00000512332 CCDC73Q6ZRK6 1079 aa10.81□□□□□ -0.68
CPNE4-210ENST00000512332 CHST3Q7LGC8 479 aa10.81□□□□□ -0.68
CPNE4-210ENST00000512332 BRAPQ7Z569 592 aa10.81□□□□□ -0.68
CPNE4-210ENST00000512332 FBXO18Q8NFZ0 1043 aa10.81□□□□□ -0.68
CPNE4-210ENST00000512332 PDCL3Q9H2J4 239 aa10.81□□□□□ -0.68
CPNE4-210ENST00000512332 BTG4Q9NY30 223 aa10.81□□□□□ -0.68
CPNE4-210ENST00000512332 HPS5Q9UPZ3 1129 aa10.81□□□□□ -0.68
CPNE4-210ENST00000512332 MYH7P12883 1935 aa10.81□□□□□ -0.68
CPNE4-210ENST00000512332 UQCRHLA0A096LP55 91 aa10.8□□□□□ -0.68
CPNE4-210ENST00000512332 UQCRHP07919 91 aa10.8□□□□□ -0.68
CPNE4-210ENST00000512332 UQCRFS1P1P0C7P4 283 aa10.8□□□□□ -0.68
CPNE4-210ENST00000512332 ANTXR2P58335 489 aa10.8□□□□□ -0.68
CPNE4-210ENST00000512332 SARM1Q6SZW1 724 aa10.8□□□□□ -0.68
CPNE4-210ENST00000512332 RALYLQ86SE5 291 aaKnown RBP10.8□□□□□ -0.68
CPNE4-210ENST00000512332 ZNF34Q8IZ26 560 aa10.8□□□□□ -0.68
CPNE4-210ENST00000512332 SLC4A9Q96Q91 983 aa10.8□□□□□ -0.68
CPNE4-210ENST00000512332 MAP7D2Q96T17 732 aa10.8□□□□□ -0.68
CPNE4-210ENST00000512332 KCNF1Q9H3M0 494 aa10.8□□□□□ -0.68
CPNE4-210ENST00000512332 CNNM1Q9NRU3 951 aa10.8□□□□□ -0.68
CPNE4-210ENST00000512332 POLR3EQ9NVU0 708 aa10.8□□□□□ -0.68
CPNE4-210ENST00000512332 ANKRD36CQ5JPF3 1778 aa10.8□□□□□ -0.68
CPNE4-210ENST00000512332 DDX60Q8IY21 1712 aaKnown RBP10.8□□□□□ -0.68
CPNE4-210ENST00000512332 MYH3P11055 1940 aa10.8□□□□□ -0.68
CPNE4-210ENST00000512332 ZMYM6O95789 1325 aa10.8□□□□□ -0.68
CPNE4-210ENST00000512332 MROH5Q6ZUA9 1318 aa10.8□□□□□ -0.68
CPNE4-210ENST00000512332 YEATS4O95619 227 aa10.8□□□□□ -0.68
CPNE4-210ENST00000512332 CDC25BP30305 580 aa10.8□□□□□ -0.68
CPNE4-210ENST00000512332 ZNF75DP51815 510 aa10.8□□□□□ -0.68
CPNE4-210ENST00000512332 IQCB1Q15051 598 aa10.8□□□□□ -0.68
CPNE4-210ENST00000512332 ALX1Q15699 326 aa10.8□□□□□ -0.68
CPNE4-210ENST00000512332 STX1AQ16623 288 aa10.8□□□□□ -0.68
CPNE4-210ENST00000512332 SYNE4Q8N205 404 aa10.8□□□□□ -0.68
CPNE4-210ENST00000512332 MYRIPQ8NFW9 859 aa10.8□□□□□ -0.68
CPNE4-210ENST00000512332 CCDC85AQ96PX6 553 aaPredicted RBP10.8□□□□□ -0.68
CPNE4-210ENST00000512332 TRMT112Q9UI30 125 aaKnown RBP10.8□□□□□ -0.68
CPNE4-210ENST00000512332 KLF18A0A0U1RQI7 1052 aa10.79□□□□□ -0.68
CPNE4-210ENST00000512332 KINO60870 393 aaKnown RBP10.79□□□□□ -0.68
CPNE4-210ENST00000512332 HAND2P61296 217 aa10.79□□□□□ -0.68
CPNE4-210ENST00000512332 TRDNQ13061 729 aa10.79□□□□□ -0.68
CPNE4-210ENST00000512332 SLC9C2Q5TAH2 1124 aa10.79□□□□□ -0.68
CPNE4-210ENST00000512332 KCNG4Q8TDN1 519 aa10.79□□□□□ -0.68
CPNE4-210ENST00000512332 LPIN2Q92539 896 aa10.79□□□□□ -0.68
CPNE4-210ENST00000512332 C8orf76Q96K31 380 aa10.79□□□□□ -0.68
CPNE4-210ENST00000512332 DNAJC25Q9H1X3 360 aa10.79□□□□□ -0.68
CPNE4-210ENST00000512332 NAP1L2Q9ULW6 460 aaPredicted RBP10.79□□□□□ -0.68
CPNE4-210ENST00000512332 COL14A1Q05707 1796 aaKnown RBP10.79□□□□□ -0.68
CPNE4-210ENST00000512332 EXOC5O00471 708 aa10.78□□□□□ -0.68
CPNE4-210ENST00000512332 FGFR2P21802 821 aa10.78□□□□□ -0.68
CPNE4-210ENST00000512332 GPTP24298 496 aa10.78□□□□□ -0.68
CPNE4-210ENST00000512332 GTF2F1P35269 517 aaKnown RBP eCLIP10.78□□□□□ -0.68
CPNE4-210ENST00000512332 ME1P48163 572 aa10.78□□□□□ -0.68
CPNE4-210ENST00000512332 CEBPZQ03701 1054 aaKnown RBP10.78□□□□□ -0.68
CPNE4-210ENST00000512332 PUM3Q15397 648 aaKnown RBP10.78□□□□□ -0.68
CPNE4-210ENST00000512332 CCDC102BQ68D86 513 aa10.78□□□□□ -0.68
CPNE4-210ENST00000512332 PI16Q6UXB8 463 aa10.78□□□□□ -0.68
CPNE4-210ENST00000512332 MTERF4Q7Z6M4 381 aaKnown RBP10.78□□□□□ -0.68
CPNE4-210ENST00000512332 MPNDQ8N594 471 aa10.78□□□□□ -0.68
CPNE4-210ENST00000512332 LINC00301Q8NCQ3 95 aa10.78□□□□□ -0.68
CPNE4-210ENST00000512332 GOLPH3LQ9H4A5 285 aa10.78□□□□□ -0.68
CPNE4-210ENST00000512332 GPHNQ9NQX3 736 aaPredicted RBP10.78□□□□□ -0.68
CPNE4-210ENST00000512332 ORC3Q9UBD5 711 aaPredicted RBP10.78□□□□□ -0.68
CPNE4-210ENST00000512332 ANGEL1Q9UNK9 670 aaKnown RBP10.78□□□□□ -0.68
CPNE4-210ENST00000512332 TBC1D2BQ9UPU7 963 aa10.78□□□□□ -0.68
CPNE4-210ENST00000512332 ZBTB1Q9Y2K1 713 aa10.78□□□□□ -0.68
CPNE4-210ENST00000512332 LRP5O75197 1615 aa10.78□□□□□ -0.68
CPNE4-210ENST00000512332 GOLGA8BA8MQT2 603 aa10.78□□□□□ -0.68
CPNE4-210ENST00000512332 CPLX1O14810 134 aa10.78□□□□□ -0.68
CPNE4-210ENST00000512332 DNTTIP2Q5QJE6 756 aaKnown RBP10.78□□□□□ -0.68
CPNE4-210ENST00000512332 FMR1NBQ8N0W7 255 aaPredicted RBP10.78□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms