RNA–Protein interactions for RNA: ENST00000512258.1

MSH3-202, Transcript of mutS homolog 3, humanhuman

TSL 3

Gene MSH3, Length 677 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH3-202ENST00000512258 MLH3Q9UHC1 1453 aa7.68□□□□□ -1.18
MSH3-202ENST00000512258 J3QW42 95 aa7.67□□□□□ -1.18
MSH3-202ENST00000512258 WISP1O95388 367 aa7.67□□□□□ -1.18
MSH3-202ENST00000512258 NFIAQ12857 509 aa7.67□□□□□ -1.18
MSH3-202ENST00000512258 IL22RA1Q8N6P7 574 aa7.67□□□□□ -1.18
MSH3-202ENST00000512258 TLR7Q9NYK1 1049 aaKnown RBP7.67□□□□□ -1.18
MSH3-202ENST00000512258 NCOA1Q15788 1441 aa7.67□□□□□ -1.18
MSH3-202ENST00000512258 ADGRL2O95490 1459 aa7.67□□□□□ -1.18
MSH3-202ENST00000512258 DIP2CQ9Y2E4 1556 aa7.67□□□□□ -1.18
MSH3-202ENST00000512258 ADGBQ8N7X0 1667 aa7.67□□□□□ -1.18
MSH3-202ENST00000512258 SIGLEC1Q9BZZ2 1709 aa7.66□□□□□ -1.18
MSH3-202ENST00000512258 INTS5Q6P9B9 1019 aaKnown RBP7.66□□□□□ -1.18
MSH3-202ENST00000512258 GALNT11Q8NCW6 608 aa7.66□□□□□ -1.18
MSH3-202ENST00000512258 RTEL1-TNFRSF6BF6WH68 1400 aa7.66□□□□□ -1.18
MSH3-202ENST00000512258 PLXNC1O60486 1568 aa7.66□□□□□ -1.18
MSH3-202ENST00000512258 POM121CA8CG34 1229 aa7.65□□□□□ -1.18
MSH3-202ENST00000512258 ATP9BO43861 1147 aa7.65□□□□□ -1.18
MSH3-202ENST00000512258 ARSDP51689 593 aa7.65□□□□□ -1.18
MSH3-202ENST00000512258 NAIPQ13075 1403 aa7.65□□□□□ -1.18
MSH3-202ENST00000512258 ROCK1Q13464 1354 aa7.65□□□□□ -1.18
MSH3-202ENST00000512258 GDF6Q6KF10 455 aaPredicted RBP7.65□□□□□ -1.18
MSH3-202ENST00000512258 MAP4K3Q8IVH8 894 aa7.65□□□□□ -1.18
MSH3-202ENST00000512258 ARHGEF40Q8TER5 1519 aa7.65□□□□□ -1.18
MSH3-202ENST00000512258 ANKRD30AQ9BXX3 1397 aa7.65□□□□□ -1.18
MSH3-202ENST00000512258 C7orf69Q9H7B7 122 aa7.65□□□□□ -1.18
MSH3-202ENST00000512258 KIF15Q9NS87 1388 aa7.65□□□□□ -1.18
MSH3-202ENST00000512258 MAGI2Q86UL8 1455 aa7.64□□□□□ -1.19
MSH3-202ENST00000512258 LOC102724428A0A0B4J2F2 783 aa7.64□□□□□ -1.19
MSH3-202ENST00000512258 OPLAHO14841 1288 aa7.64□□□□□ -1.19
MSH3-202ENST00000512258 DHX15O43143 795 aaKnown RBP7.64□□□□□ -1.19
MSH3-202ENST00000512258 EGFRP00533 1210 aa7.64□□□□□ -1.19
MSH3-202ENST00000512258 HOXD8P13378 290 aaPredicted RBP7.64□□□□□ -1.19
MSH3-202ENST00000512258 RASA1P20936 1047 aa7.64□□□□□ -1.19
MSH3-202ENST00000512258 SIK1P57059 783 aa7.64□□□□□ -1.19
MSH3-202ENST00000512258 LCE4AQ5TA78 99 aa7.64□□□□□ -1.19
MSH3-202ENST00000512258 TRIM42Q8IWZ5 723 aa7.64□□□□□ -1.19
MSH3-202ENST00000512258 FAM46AQ96IP4 442 aaKnown RBP7.64□□□□□ -1.19
MSH3-202ENST00000512258 USP20Q9Y2K6 914 aa7.64□□□□□ -1.19
MSH3-202ENST00000512258 ATP10AO60312 1499 aa7.63□□□□□ -1.19
MSH3-202ENST00000512258 A2MP01023 1474 aa7.63□□□□□ -1.19
MSH3-202ENST00000512258 HFM1A2PYH4 1435 aa7.63□□□□□ -1.19
MSH3-202ENST00000512258 HMX2A2RU54 273 aa7.63□□□□□ -1.19
MSH3-202ENST00000512258 LGR5O75473 907 aa7.63□□□□□ -1.19
MSH3-202ENST00000512258 MICAL2O94851 1124 aa7.63□□□□□ -1.19
MSH3-202ENST00000512258 RNF43Q68DV7 783 aa7.63□□□□□ -1.19
MSH3-202ENST00000512258 POM121Q96HA1 1249 aa7.63□□□□□ -1.19
MSH3-202ENST00000512258 QTRT2Q9H974 415 aaKnown RBP7.63□□□□□ -1.19
MSH3-202ENST00000512258 KCNK4Q9NYG8 393 aa7.63□□□□□ -1.19
MSH3-202ENST00000512258 TRIM33Q9UPN9 1127 aa7.63□□□□□ -1.19
MSH3-202ENST00000512258 GCC2Q8IWJ2 1684 aa7.63□□□□□ -1.19
MSH3-202ENST00000512258 DUOX2Q9NRD8 1548 aa7.62□□□□□ -1.19
MSH3-202ENST00000512258 SETD5Q9C0A6 1442 aa7.62□□□□□ -1.19
MSH3-202ENST00000512258 DHX29Q7Z478 1369 aaKnown RBP7.62□□□□□ -1.19
MSH3-202ENST00000512258 WNT11O96014 354 aa7.62□□□□□ -1.19
MSH3-202ENST00000512258 GRIK1P39086 918 aa7.62□□□□□ -1.19
MSH3-202ENST00000512258 DGKZQ13574 1117 aa7.62□□□□□ -1.19
MSH3-202ENST00000512258 BCANQ96GW7 911 aa7.62□□□□□ -1.19
MSH3-202ENST00000512258 ANKRD50Q9ULJ7 1429 aa7.61□□□□□ -1.19
MSH3-202ENST00000512258 RAB3GAP2Q9H2M9 1393 aa7.61□□□□□ -1.19
MSH3-202ENST00000512258 MMP20O60882 483 aa7.61□□□□□ -1.19
MSH3-202ENST00000512258 IGFBP4P22692 258 aa7.61□□□□□ -1.19
MSH3-202ENST00000512258 SEC13P55735 322 aa7.61□□□□□ -1.19
MSH3-202ENST00000512258 OGFOD2Q6N063 350 aa7.61□□□□□ -1.19
MSH3-202ENST00000512258 NSUN5Q96P11 429 aaKnown RBP7.61□□□□□ -1.19
MSH3-202ENST00000512258 DBNDD2Q9BQY9 259 aa7.61□□□□□ -1.19
MSH3-202ENST00000512258 RTCBQ9Y3I0 505 aaKnown RBP7.61□□□□□ -1.19
MSH3-202ENST00000512258 KIF3BO15066 747 aa7.6□□□□□ -1.19
MSH3-202ENST00000512258 MLECQ14165 292 aa7.6□□□□□ -1.19
MSH3-202ENST00000512258 UVSSAQ2YD98 709 aa7.6□□□□□ -1.19
MSH3-202ENST00000512258 ADAMTSL4Q6UY14 1074 aa7.6□□□□□ -1.19
MSH3-202ENST00000512258 ERBINQ96RT1 1412 aa7.6□□□□□ -1.19
MSH3-202ENST00000512258 MROH1Q8NDA8 1641 aa7.6□□□□□ -1.19
MSH3-202ENST00000512258 REREQ9P2R6 1566 aa7.59□□□□□ -1.19
MSH3-202ENST00000512258 ARID4AP29374 1257 aaPredicted RBP7.59□□□□□ -1.19
MSH3-202ENST00000512258 SOX18P35713 384 aa7.59□□□□□ -1.19
MSH3-202ENST00000512258 KIAA1211Q6ZU35 1233 aa7.59□□□□□ -1.19
MSH3-202ENST00000512258 ABI1Q8IZP0 508 aa7.59□□□□□ -1.19
MSH3-202ENST00000512258 SHKBP1Q8TBC3 707 aa7.59□□□□□ -1.19
MSH3-202ENST00000512258 DCAF11Q8TEB1 546 aa7.59□□□□□ -1.19
MSH3-202ENST00000512258 UTP4Q969X6 686 aaKnown RBP7.59□□□□□ -1.19
MSH3-202ENST00000512258 MYRFLQ96LU7 910 aa7.59□□□□□ -1.19
MSH3-202ENST00000512258 ARID4BQ4LE39 1312 aaPredicted RBP7.58□□□□□ -1.2
MSH3-202ENST00000512258 XYLBO75191 536 aa7.58□□□□□ -1.2
MSH3-202ENST00000512258 HOXA10P31260 410 aaPredicted RBP7.58□□□□□ -1.2
MSH3-202ENST00000512258 GGT6Q6P531 493 aa7.58□□□□□ -1.2
MSH3-202ENST00000512258 ACAD11Q709F0 780 aa7.58□□□□□ -1.2
MSH3-202ENST00000512258 MYO19Q96H55 970 aa7.58□□□□□ -1.2
MSH3-202ENST00000512258 CEP41Q9BYV8 373 aa7.58□□□□□ -1.2
MSH3-202ENST00000512258 PPME1Q9Y570 386 aa7.58□□□□□ -1.2
MSH3-202ENST00000512258 KCNMB2Q9Y691 235 aa7.58□□□□□ -1.2
MSH3-202ENST00000512258 EIF2AK4Q9P2K8 1649 aaKnown RBP7.58□□□□□ -1.2
MSH3-202ENST00000512258 AGLP35573 1532 aa7.57□□□□□ -1.2
MSH3-202ENST00000512258 LINC01387J3KSC0 135 aa7.57□□□□□ -1.2
MSH3-202ENST00000512258 GHRHP01286 108 aa7.57□□□□□ -1.2
MSH3-202ENST00000512258 CD68P34810 354 aaPredicted RBP7.57□□□□□ -1.2
MSH3-202ENST00000512258 NFXL1Q6ZNB6 911 aa7.57□□□□□ -1.2
MSH3-202ENST00000512258 UNC13BO14795 1591 aa7.57□□□□□ -1.2
MSH3-202ENST00000512258 DEPDC5O75140 1603 aa7.56□□□□□ -1.2
MSH3-202ENST00000512258 RNF17Q9BXT8 1623 aaKnown RBP7.56□□□□□ -1.2
MSH3-202ENST00000512258 BCORL1Q5H9F3 1711 aa7.56□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms