RNA–Protein interactions for RNA: ENST00000512243.5

SNF8-211, Transcript of SNF8, ESCRT-II complex subunit, humanhuman

TSL 2

Gene SNF8, Length 863 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNF8-211ENST00000512243 TEX13AQ9BXU3 409 aaPredicted RBP12.13□□□□□ -0.47
SNF8-211ENST00000512243 SOS1Q07889 1333 aaPredicted RBP12.12□□□□□ -0.47
SNF8-211ENST00000512243 GIGYF1O75420 1035 aaPredicted RBP12.12□□□□□ -0.47
SNF8-211ENST00000512243 STARD3NLO95772 234 aa12.12□□□□□ -0.47
SNF8-211ENST00000512243 KCNQ4P56696 695 aa12.12□□□□□ -0.47
SNF8-211ENST00000512243 RAB15P59190 212 aa12.12□□□□□ -0.47
SNF8-211ENST00000512243 ITPK1Q13572 414 aa12.12□□□□□ -0.47
SNF8-211ENST00000512243 KRT24Q2M2I5 525 aa12.12□□□□□ -0.47
SNF8-211ENST00000512243 INTS6LQ5JSJ4 861 aaKnown RBP12.12□□□□□ -0.47
SNF8-211ENST00000512243 LCE2AQ5TA79 106 aaPredicted RBP12.12□□□□□ -0.47
SNF8-211ENST00000512243 DUSP27Q5VZP5 1158 aa12.12□□□□□ -0.47
SNF8-211ENST00000512243 LINC00116Q8NCU8 138 aa12.12□□□□□ -0.47
SNF8-211ENST00000512243 LRRC4BQ9NT99 713 aa12.12□□□□□ -0.47
SNF8-211ENST00000512243 CDV3Q9UKY7 258 aaKnown RBP12.12□□□□□ -0.47
SNF8-211ENST00000512243 PRAMEF22A3QJZ6 481 aa12.11□□□□□ -0.47
SNF8-211ENST00000512243 TERTO14746 1132 aaKnown RBP12.11□□□□□ -0.47
SNF8-211ENST00000512243 EXOSC9Q06265 439 aaKnown RBP12.11□□□□□ -0.47
SNF8-211ENST00000512243 TRMT2AQ8IZ69 625 aaKnown RBP12.11□□□□□ -0.47
SNF8-211ENST00000512243 LINC00528Q8N1L1 170 aa12.11□□□□□ -0.47
SNF8-211ENST00000512243 C4AP0C0L4 1744 aa12.11□□□□□ -0.47
SNF8-211ENST00000512243 CNTNAP4Q9C0A0 1308 aa12.11□□□□□ -0.47
SNF8-211ENST00000512243 SOCS7O14512 581 aa12.1□□□□□ -0.47
SNF8-211ENST00000512243 BMP2P12643 396 aa12.1□□□□□ -0.47
SNF8-211ENST00000512243 CRKLP46109 303 aaKnown RBP12.1□□□□□ -0.47
SNF8-211ENST00000512243 CBLBQ13191 982 aa12.1□□□□□ -0.47
SNF8-211ENST00000512243 TWISTNBQ3B726 338 aaPredicted RBP12.1□□□□□ -0.47
SNF8-211ENST00000512243 HDGFL1Q5TGJ6 251 aa12.1□□□□□ -0.47
SNF8-211ENST00000512243 DZIP3Q86Y13 1208 aaKnown RBP12.1□□□□□ -0.47
SNF8-211ENST00000512243 C8orf58Q8NAV2 365 aa12.1□□□□□ -0.47
SNF8-211ENST00000512243 CHMP4AQ9BY43 222 aa12.1□□□□□ -0.47
SNF8-211ENST00000512243 ELL2O00472 640 aaPredicted RBP12.09□□□□□ -0.47
SNF8-211ENST00000512243 CYP19A1P11511 503 aaPredicted RBP12.09□□□□□ -0.47
SNF8-211ENST00000512243 EIF2S2P20042 333 aaKnown RBP12.09□□□□□ -0.47
SNF8-211ENST00000512243 TSPYL6Q8N831 410 aa12.09□□□□□ -0.47
SNF8-211ENST00000512243 CCDC87Q9NVE4 849 aa12.09□□□□□ -0.47
SNF8-211ENST00000512243 PGPEP1Q9NXJ5 209 aa12.09□□□□□ -0.47
SNF8-211ENST00000512243 USP16Q9Y5T5 823 aa12.09□□□□□ -0.47
SNF8-211ENST00000512243 ERBB4Q15303 1308 aa12.09□□□□□ -0.47
SNF8-211ENST00000512243 BCORQ6W2J9 1755 aa12.08□□□□□ -0.48
SNF8-211ENST00000512243 UPP2O95045 317 aa12.08□□□□□ -0.48
SNF8-211ENST00000512243 CT47B1P0C2W7 299 aaPredicted RBP12.08□□□□□ -0.48
SNF8-211ENST00000512243 NBPF20Q3BBV1 942 aa12.08□□□□□ -0.48
SNF8-211ENST00000512243 MTMR14Q8NCE2 650 aa12.08□□□□□ -0.48
SNF8-211ENST00000512243 SNRKQ9NRH2 765 aa12.08□□□□□ -0.48
SNF8-211ENST00000512243 STK32BQ9NY57 414 aa12.08□□□□□ -0.48
SNF8-211ENST00000512243 SCN7AQ01118 1682 aa12.07□□□□□ -0.48
SNF8-211ENST00000512243 VEGFBP49765 207 aa12.07□□□□□ -0.48
SNF8-211ENST00000512243 ZNF827Q17R98 1081 aa12.07□□□□□ -0.48
SNF8-211ENST00000512243 CCDC30Q5VVM6 783 aa12.07□□□□□ -0.48
SNF8-211ENST00000512243 ZBTB1Q9Y2K1 713 aa12.07□□□□□ -0.48
SNF8-211ENST00000512243 ZBBXA8MT70 800 aa12.06□□□□□ -0.48
SNF8-211ENST00000512243 VAMP4O75379 141 aa12.06□□□□□ -0.48
SNF8-211ENST00000512243 A1BGP04217 495 aa12.06□□□□□ -0.48
SNF8-211ENST00000512243 FBXO45P0C2W1 286 aa12.06□□□□□ -0.48
SNF8-211ENST00000512243 LCE2CQ5TA81 110 aa12.06□□□□□ -0.48
SNF8-211ENST00000512243 INTS5Q6P9B9 1019 aaKnown RBP12.06□□□□□ -0.48
SNF8-211ENST00000512243 NPM2Q86SE8 214 aaKnown RBP12.06□□□□□ -0.48
SNF8-211ENST00000512243 BANK1Q8NDB2 785 aa12.06□□□□□ -0.48
SNF8-211ENST00000512243 STK31Q9BXU1 1019 aa12.06□□□□□ -0.48
SNF8-211ENST00000512243 RTCBQ9Y3I0 505 aaKnown RBP12.06□□□□□ -0.48
SNF8-211ENST00000512243 COL15A1P39059 1388 aa12.05□□□□□ -0.48
SNF8-211ENST00000512243 CANXP27824 592 aaKnown RBP12.05□□□□□ -0.48
SNF8-211ENST00000512243 DHX9Q08211 1270 aaKnown RBP12.05□□□□□ -0.48
SNF8-211ENST00000512243 ZNF428Q96B54 188 aa12.05□□□□□ -0.48
SNF8-211ENST00000512243 TMPRSS4Q9NRS4 437 aa12.05□□□□□ -0.48
SNF8-211ENST00000512243 TFCP2L1Q9NZI6 479 aa12.05□□□□□ -0.48
SNF8-211ENST00000512243 CHPF2Q9P2E5 772 aa12.05□□□□□ -0.48
SNF8-211ENST00000512243 NXF1Q9UBU9 619 aaKnown RBP12.05□□□□□ -0.48
SNF8-211ENST00000512243 ZNF330Q9Y3S2 320 aaPredicted RBP12.05□□□□□ -0.48
SNF8-211ENST00000512243 ARFGEF2Q9Y6D5 1785 aa12.05□□□□□ -0.48
SNF8-211ENST00000512243 NUP98P52948 1817 aa12.04□□□□□ -0.48
SNF8-211ENST00000512243 MAN1A2O60476 641 aa12.04□□□□□ -0.48
SNF8-211ENST00000512243 RPS6KA4O75676 772 aa12.04□□□□□ -0.48
SNF8-211ENST00000512243 MYL6BP14649 208 aa12.04□□□□□ -0.48
SNF8-211ENST00000512243 SSFA2P28290 1259 aa12.04□□□□□ -0.48
SNF8-211ENST00000512243 IL6STP40189 918 aaPredicted RBP12.04□□□□□ -0.48
SNF8-211ENST00000512243 PIP4K2AP48426 406 aaPredicted RBP12.04□□□□□ -0.48
SNF8-211ENST00000512243 SLC15A2Q16348 729 aa12.04□□□□□ -0.48
SNF8-211ENST00000512243 TSEN34Q9BSV6 310 aaKnown RBP12.04□□□□□ -0.48
SNF8-211ENST00000512243 DDX21Q9NR30 783 aaKnown RBP eCLIP12.04□□□□□ -0.48
SNF8-211ENST00000512243 DBF4Q9UBU7 674 aaPredicted RBP12.04□□□□□ -0.48
SNF8-211ENST00000512243 PCDHB9Q9Y5E1 797 aa12.04□□□□□ -0.48
SNF8-211ENST00000512243 ANKRD36CQ5JPF3 1778 aa12.04□□□□□ -0.48
SNF8-211ENST00000512243 CASZ1Q86V15 1759 aa12.04□□□□□ -0.48
SNF8-211ENST00000512243 A0A087WZG4 1122 aa12.03□□□□□ -0.48
SNF8-211ENST00000512243 ANXA1P04083 346 aa12.03□□□□□ -0.48
SNF8-211ENST00000512243 PROSER3Q2NL68 480 aa12.03□□□□□ -0.48
SNF8-211ENST00000512243 NBPF10Q6P3W6 841 aaKnown RBP12.03□□□□□ -0.48
SNF8-211ENST00000512243 NBPF15Q8N660 670 aa12.03□□□□□ -0.48
SNF8-211ENST00000512243 FLAD1Q8NFF5 587 aa12.03□□□□□ -0.48
SNF8-211ENST00000512243 HYPKQ9NX55 129 aa12.03□□□□□ -0.48
SNF8-211ENST00000512243 TCERG1O14776 1098 aaKnown RBP12.02□□□□□ -0.49
SNF8-211ENST00000512243 GPR37L1O60883 481 aa12.02□□□□□ -0.49
SNF8-211ENST00000512243 EIF5P55010 431 aaKnown RBP12.02□□□□□ -0.49
SNF8-211ENST00000512243 ALDH1L2Q3SY69 923 aa12.02□□□□□ -0.49
SNF8-211ENST00000512243 AGBL1Q96MI9 1066 aa12.02□□□□□ -0.49
SNF8-211ENST00000512243 SMC4Q9NTJ3 1288 aa12.02□□□□□ -0.49
SNF8-211ENST00000512243 AFDNP55196 1824 aaKnown RBP12.02□□□□□ -0.49
SNF8-211ENST00000512243 N4BP2Q86UW6 1770 aaPredicted RBP12.01□□□□□ -0.49
SNF8-211ENST00000512243 ERVH48-1M5A8F1 160 aa12.01□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms