RNA–Protein interactions for RNA: ENST00000512193.5

NEK1-208, Transcript of NIMA related kinase 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene NEK1, Length 4,430 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK1-208ENST00000512193 PRM3Q9NNZ6 103 aa9.21□□□□□ -0.94
NEK1-208ENST00000512193 AKR1B10O60218 316 aa9.2□□□□□ -0.94
NEK1-208ENST00000512193 MBD4O95243 580 aa9.2□□□□□ -0.94
NEK1-208ENST00000512193 RDXP35241 583 aaKnown RBP9.2□□□□□ -0.94
NEK1-208ENST00000512193 TTC6Q86TZ1 520 aa9.2□□□□□ -0.94
NEK1-208ENST00000512193 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP9.2□□□□□ -0.94
NEK1-208ENST00000512193 LZTFL1Q9NQ48 299 aa9.2□□□□□ -0.94
NEK1-208ENST00000512193 KDM5DQ9BY66 1539 aa9.2□□□□□ -0.94
NEK1-208ENST00000512193 GPAA1O43292 621 aa9.2□□□□□ -0.94
NEK1-208ENST00000512193 MYL5Q02045 173 aa9.2□□□□□ -0.94
NEK1-208ENST00000512193 SPECC1Q5M775 1068 aa9.2□□□□□ -0.94
NEK1-208ENST00000512193 ANO1Q5XXA6 986 aa9.2□□□□□ -0.94
NEK1-208ENST00000512193 CALML4Q96GE6 196 aa9.2□□□□□ -0.94
NEK1-208ENST00000512193 XAGE2Q96GT9 111 aa9.2□□□□□ -0.94
NEK1-208ENST00000512193 ZFP91Q96JP5 570 aaPredicted RBP9.2□□□□□ -0.94
NEK1-208ENST00000512193 CALCOCO1Q9P1Z2 691 aa9.2□□□□□ -0.94
NEK1-208ENST00000512193 STAT6P42226 847 aa9.2□□□□□ -0.94
NEK1-208ENST00000512193 CCDC40Q4G0X9 1142 aa9.2□□□□□ -0.94
NEK1-208ENST00000512193 CCDC178Q5BJE1 867 aa9.2□□□□□ -0.94
NEK1-208ENST00000512193 TCERG1LQ5VWI1 586 aa9.2□□□□□ -0.94
NEK1-208ENST00000512193 TRMT1LQ7Z2T5 733 aaKnown RBP9.2□□□□□ -0.94
NEK1-208ENST00000512193 MYL10Q9BUA6 226 aa9.2□□□□□ -0.94
NEK1-208ENST00000512193 SYNMO15061 1565 aa9.2□□□□□ -0.94
NEK1-208ENST00000512193 PRDM15P57071 1507 aaPredicted RBP9.2□□□□□ -0.94
NEK1-208ENST00000512193 NEURL1BA8MQ27 555 aa9.19□□□□□ -0.94
NEK1-208ENST00000512193 MYO1BO43795 1136 aa9.19□□□□□ -0.94
NEK1-208ENST00000512193 ATP6V1AP38606 617 aa9.19□□□□□ -0.94
NEK1-208ENST00000512193 ATL3Q6DD88 541 aa9.19□□□□□ -0.94
NEK1-208ENST00000512193 SMARCC1Q92922 1105 aaPredicted RBP9.19□□□□□ -0.94
NEK1-208ENST00000512193 DRC1Q96MC2 740 aa9.19□□□□□ -0.94
NEK1-208ENST00000512193 LLPHQ9BRT6 129 aaKnown RBP9.19□□□□□ -0.94
NEK1-208ENST00000512193 SLC52A2Q9HAB3 445 aa9.19□□□□□ -0.94
NEK1-208ENST00000512193 METP08581 1390 aa9.19□□□□□ -0.94
NEK1-208ENST00000512193 PLXNC1O60486 1568 aa9.19□□□□□ -0.94
NEK1-208ENST00000512193 FGFR1OPO95684 399 aaKnown RBP9.19□□□□□ -0.94
NEK1-208ENST00000512193 BAG3O95817 575 aa9.19□□□□□ -0.94
NEK1-208ENST00000512193 BMP15O95972 392 aa9.19□□□□□ -0.94
NEK1-208ENST00000512193 LDHCP07864 332 aa9.19□□□□□ -0.94
NEK1-208ENST00000512193 KRI1Q8N9T8 703 aaKnown RBP9.19□□□□□ -0.94
NEK1-208ENST00000512193 MYRIPQ8NFW9 859 aa9.19□□□□□ -0.94
NEK1-208ENST00000512193 APPBP2Q92624 585 aa9.19□□□□□ -0.94
NEK1-208ENST00000512193 PHKBQ93100 1093 aa9.19□□□□□ -0.94
NEK1-208ENST00000512193 OSBPL3Q9H4L5 887 aa9.19□□□□□ -0.94
NEK1-208ENST00000512193 CABP5Q9NP86 173 aa9.19□□□□□ -0.94
NEK1-208ENST00000512193 STAP2Q9UGK3 403 aa9.19□□□□□ -0.94
NEK1-208ENST00000512193 JAG2Q9Y219 1238 aa9.19□□□□□ -0.94
NEK1-208ENST00000512193 ARHGEF10O15013 1369 aa9.19□□□□□ -0.94
NEK1-208ENST00000512193 YEATS2Q9ULM3 1422 aa9.19□□□□□ -0.94
NEK1-208ENST00000512193 ATP5JP18859 108 aa9.19□□□□□ -0.94
NEK1-208ENST00000512193 AMPD3Q01432 767 aa9.19□□□□□ -0.94
NEK1-208ENST00000512193 LRMPQ12912 555 aa9.19□□□□□ -0.94
NEK1-208ENST00000512193 TMEM132AQ24JP5 1023 aa9.19□□□□□ -0.94
NEK1-208ENST00000512193 PROSER3Q2NL68 480 aa9.19□□□□□ -0.94
NEK1-208ENST00000512193 SPTY2D1Q68D10 685 aaPredicted RBP9.19□□□□□ -0.94
NEK1-208ENST00000512193 NBPF5PQ86XG9 351 aaPredicted RBP9.19□□□□□ -0.94
NEK1-208ENST00000512193 DDX17Q92841 729 aaKnown RBP9.19□□□□□ -0.94
NEK1-208ENST00000512193 NR1I2O75469 434 aa9.19□□□□□ -0.94
NEK1-208ENST00000512193 CCDC175P0C221 793 aa9.19□□□□□ -0.94
NEK1-208ENST00000512193 U2AF2P26368 475 aaKnown RBP eCLIP9.19□□□□□ -0.94
NEK1-208ENST00000512193 HEATR3Q7Z4Q2 680 aa9.19□□□□□ -0.94
NEK1-208ENST00000512193 ZSWIM6Q9HCJ5 1215 aa9.19□□□□□ -0.94
NEK1-208ENST00000512193 ANGEL1Q9UNK9 670 aaKnown RBP9.19□□□□□ -0.94
NEK1-208ENST00000512193 ZNF202O95125 648 aa9.18□□□□□ -0.94
NEK1-208ENST00000512193 SPAG1Q07617 926 aa9.18□□□□□ -0.94
NEK1-208ENST00000512193 HLTFQ14527 1009 aaKnown RBP eCLIP9.18□□□□□ -0.94
NEK1-208ENST00000512193 CCDC191Q8NCU4 936 aa9.18□□□□□ -0.94
NEK1-208ENST00000512193 PLIN2Q99541 437 aa9.18□□□□□ -0.94
NEK1-208ENST00000512193 PUF60Q9UHX1 559 aaKnown RBP9.18□□□□□ -0.94
NEK1-208ENST00000512193 MAGEB6P1A0A0J9YX57 407 aa9.18□□□□□ -0.94
NEK1-208ENST00000512193 NEFHP12036 1026 aa9.18□□□□□ -0.94
NEK1-208ENST00000512193 ITGA6P23229 1130 aa9.18□□□□□ -0.94
NEK1-208ENST00000512193 RPGRQ92834 1020 aaKnown RBP9.18□□□□□ -0.94
NEK1-208ENST00000512193 NGLY1Q96IV0 654 aa9.18□□□□□ -0.94
NEK1-208ENST00000512193 CTAGE1Q96RT6 745 aa9.18□□□□□ -0.94
NEK1-208ENST00000512193 PYM1Q9BRP8 204 aaKnown RBP9.18□□□□□ -0.94
NEK1-208ENST00000512193 LSG1Q9H089 658 aaKnown RBP9.18□□□□□ -0.94
NEK1-208ENST00000512193 ELP1O95163 1332 aa9.18□□□□□ -0.94
NEK1-208ENST00000512193 CTAGE15A4D2H0 777 aa9.18□□□□□ -0.94
NEK1-208ENST00000512193 PPP1R12BO60237 982 aaPredicted RBP9.18□□□□□ -0.94
NEK1-208ENST00000512193 CTAGE8P0CG41 777 aa9.18□□□□□ -0.94
NEK1-208ENST00000512193 MCM7P33993 719 aa9.18□□□□□ -0.94
NEK1-208ENST00000512193 ZAP70P43403 619 aa9.18□□□□□ -0.94
NEK1-208ENST00000512193 CTAGE6Q86UF2 777 aa9.18□□□□□ -0.94
NEK1-208ENST00000512193 CTAGE4Q8IX94 777 aa9.18□□□□□ -0.94
NEK1-208ENST00000512193 GTF3C6Q969F1 213 aa9.18□□□□□ -0.94
NEK1-208ENST00000512193 USP28Q96RU2 1077 aa9.18□□□□□ -0.94
NEK1-208ENST00000512193 EXOC1Q9NV70 894 aa9.18□□□□□ -0.94
NEK1-208ENST00000512193 TMEM2Q9UHN6 1383 aa9.17□□□□□ -0.94
NEK1-208ENST00000512193 E7EWF7 191 aa9.17□□□□□ -0.94
NEK1-208ENST00000512193 POTEB2H3BUK9 544 aa9.17□□□□□ -0.94
NEK1-208ENST00000512193 PSMA7O14818 248 aa9.17□□□□□ -0.94
NEK1-208ENST00000512193 PRDM1O75626 825 aa9.17□□□□□ -0.94
NEK1-208ENST00000512193 TSPY3P0CV98 308 aa9.17□□□□□ -0.94
NEK1-208ENST00000512193 TSPY8P0CW00 308 aa9.17□□□□□ -0.94
NEK1-208ENST00000512193 NOP2P46087 812 aaKnown RBP9.17□□□□□ -0.94
NEK1-208ENST00000512193 FANCCQ00597 558 aa9.17□□□□□ -0.94
NEK1-208ENST00000512193 PHF23Q9BUL5 403 aaPredicted RBP9.17□□□□□ -0.94
NEK1-208ENST00000512193 ARMT1Q9H993 441 aa9.17□□□□□ -0.94
NEK1-208ENST00000512193 RMND1Q9NWS8 449 aa9.17□□□□□ -0.94
NEK1-208ENST00000512193 ZNF219Q9P2Y4 722 aaPredicted RBP9.17□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 14 ms