RNA–Protein interactions for RNA: ENST00000512069.6

PDE4D-220, Transcript of phosphodiesterase 4D, humanhuman

TSL 2

Gene PDE4D, Length 536 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDE4D-220ENST00000512069 OSGEPQ9NPF4 335 aa8.36□□□□□ -1.07
PDE4D-220ENST00000512069 H3BRJ5 948 aa8.35□□□□□ -1.07
PDE4D-220ENST00000512069 CD68P34810 354 aaPredicted RBP8.35□□□□□ -1.07
PDE4D-220ENST00000512069 ENOX2Q16206 610 aaKnown RBP8.35□□□□□ -1.07
PDE4D-220ENST00000512069 FOXD4L6Q3SYB3 417 aaPredicted RBP8.35□□□□□ -1.07
PDE4D-220ENST00000512069 FOXD4L3Q6VB84 417 aaPredicted RBP8.35□□□□□ -1.07
PDE4D-220ENST00000512069 VN1R5Q7Z5H4 357 aa8.35□□□□□ -1.07
PDE4D-220ENST00000512069 TMEM130Q8N3G9 435 aa8.35□□□□□ -1.07
PDE4D-220ENST00000512069 KLHDC7BQ96G42 594 aa8.35□□□□□ -1.07
PDE4D-220ENST00000512069 MEGF10Q96KG7 1140 aa8.35□□□□□ -1.07
PDE4D-220ENST00000512069 LIN7BQ9HAP6 207 aa8.35□□□□□ -1.07
PDE4D-220ENST00000512069 F8W735 103 aaPredicted RBP8.34□□□□□ -1.07
PDE4D-220ENST00000512069 DYRK3O43781 588 aa8.34□□□□□ -1.07
PDE4D-220ENST00000512069 WISP1O95388 367 aa8.34□□□□□ -1.07
PDE4D-220ENST00000512069 PIP4K2BP78356 416 aa8.34□□□□□ -1.07
PDE4D-220ENST00000512069 HGSNATQ68CP4 663 aa8.34□□□□□ -1.07
PDE4D-220ENST00000512069 HOMEZQ8IX15 550 aa8.34□□□□□ -1.07
PDE4D-220ENST00000512069 NPHS2Q9NP85 383 aa8.34□□□□□ -1.07
PDE4D-220ENST00000512069 A0A096LPE4 126 aa8.33□□□□□ -1.08
PDE4D-220ENST00000512069 A0A1W2PPZ6 126 aa8.33□□□□□ -1.08
PDE4D-220ENST00000512069 FMR1Q06787 632 aaKnown RBP eCLIP8.33□□□□□ -1.08
PDE4D-220ENST00000512069 ASAP3Q8TDY4 903 aa8.33□□□□□ -1.08
PDE4D-220ENST00000512069 SLC7A3Q8WY07 619 aa8.33□□□□□ -1.08
PDE4D-220ENST00000512069 EHD4Q9H223 541 aa8.33□□□□□ -1.08
PDE4D-220ENST00000512069 SEC31BQ9NQW1 1179 aa8.33□□□□□ -1.08
PDE4D-220ENST00000512069 METTL12A8MUP2 240 aa8.32□□□□□ -1.08
PDE4D-220ENST00000512069 SOX1O00570 391 aaPredicted RBP8.32□□□□□ -1.08
PDE4D-220ENST00000512069 ADAM11O75078 769 aa8.32□□□□□ -1.08
PDE4D-220ENST00000512069 GRIA4P48058 902 aa8.32□□□□□ -1.08
PDE4D-220ENST00000512069 EPS8L3Q8TE67 593 aaKnown RBP8.32□□□□□ -1.08
PDE4D-220ENST00000512069 GZF1Q9H116 711 aaPredicted RBP8.32□□□□□ -1.08
PDE4D-220ENST00000512069 PNMA6FA0A0J9YX94 578 aa8.31□□□□□ -1.08
PDE4D-220ENST00000512069 LOC100996750A0A140TA64 210 aa8.31□□□□□ -1.08
PDE4D-220ENST00000512069 ARL4DP49703 201 aa8.31□□□□□ -1.08
PDE4D-220ENST00000512069 PTPN12Q05209 780 aaKnown RBP8.31□□□□□ -1.08
PDE4D-220ENST00000512069 IKBKEQ14164 716 aa8.31□□□□□ -1.08
PDE4D-220ENST00000512069 COL19A1Q14993 1142 aa8.31□□□□□ -1.08
PDE4D-220ENST00000512069 SPRED3Q2MJR0 410 aa8.31□□□□□ -1.08
PDE4D-220ENST00000512069 PRPF40BQ6NWY9 871 aaKnown RBP8.31□□□□□ -1.08
PDE4D-220ENST00000512069 ZC3HAV1Q7Z2W4 902 aaKnown RBP8.31□□□□□ -1.08
PDE4D-220ENST00000512069 FOXD4L4Q8WXT5 416 aaPredicted RBP8.31□□□□□ -1.08
PDE4D-220ENST00000512069 KRTAP4-6Q9BYQ5 205 aa8.31□□□□□ -1.08
PDE4D-220ENST00000512069 SOX17Q9H6I2 414 aaPredicted RBP8.31□□□□□ -1.08
PDE4D-220ENST00000512069 NLRP2Q9NX02 1062 aa8.31□□□□□ -1.08
PDE4D-220ENST00000512069 TRAK1Q9UPV9 953 aa8.31□□□□□ -1.08
PDE4D-220ENST00000512069 EIF4EBP3O60516 100 aaPredicted RBP8.3□□□□□ -1.08
PDE4D-220ENST00000512069 GADD45BO75293 160 aaPredicted RBP8.3□□□□□ -1.08
PDE4D-220ENST00000512069 ESRRAP11474 423 aaPredicted RBP8.3□□□□□ -1.08
PDE4D-220ENST00000512069 GLB1P16278 677 aa8.3□□□□□ -1.08
PDE4D-220ENST00000512069 ITPKAP23677 461 aa8.3□□□□□ -1.08
PDE4D-220ENST00000512069 C19orf57Q0VDD7 668 aa8.3□□□□□ -1.08
PDE4D-220ENST00000512069 DUOXA2Q1HG44 320 aa8.3□□□□□ -1.08
PDE4D-220ENST00000512069 ACAD11Q709F0 780 aa8.3□□□□□ -1.08
PDE4D-220ENST00000512069 DZIP1LQ8IYY4 767 aaKnown RBP8.3□□□□□ -1.08
PDE4D-220ENST00000512069 GLIS3Q8NEA6 775 aa8.3□□□□□ -1.08
PDE4D-220ENST00000512069 FBF1Q8TES7 1133 aa8.3□□□□□ -1.08
PDE4D-220ENST00000512069 UBASH3BQ8TF42 649 aa8.3□□□□□ -1.08
PDE4D-220ENST00000512069 PPP4R2Q9NY27 417 aa8.3□□□□□ -1.08
PDE4D-220ENST00000512069 TMEM238LA0A1B0GVL6 79 aa8.29□□□□□ -1.08
PDE4D-220ENST00000512069 H2AFB1P0C5Y9 115 aa8.29□□□□□ -1.08
PDE4D-220ENST00000512069 H2AFB2P0C5Z0 115 aa8.29□□□□□ -1.08
PDE4D-220ENST00000512069 MAPK8P45983 427 aa8.29□□□□□ -1.08
PDE4D-220ENST00000512069 NLRP12P59046 1061 aa8.29□□□□□ -1.08
PDE4D-220ENST00000512069 PRSS36Q5K4E3 855 aa8.29□□□□□ -1.08
PDE4D-220ENST00000512069 ALG1LQ6GMV1 187 aa8.29□□□□□ -1.08
PDE4D-220ENST00000512069 KIAA1211Q6ZU35 1233 aa8.29□□□□□ -1.08
PDE4D-220ENST00000512069 CLEC4MQ9H2X3 399 aaPredicted RBP8.29□□□□□ -1.08
PDE4D-220ENST00000512069 GRM2Q14416 872 aa8.28□□□□□ -1.08
PDE4D-220ENST00000512069 ZNF423Q2M1K9 1284 aa8.28□□□□□ -1.08
PDE4D-220ENST00000512069 LARP7Q4G0J3 582 aaKnown RBP eCLIP8.28□□□□□ -1.08
PDE4D-220ENST00000512069 UBL7Q96S82 380 aaPredicted RBP8.28□□□□□ -1.08
PDE4D-220ENST00000512069 ZFYVE1Q9HBF4 777 aa8.28□□□□□ -1.08
PDE4D-220ENST00000512069 ABCB6Q9NP58 842 aa8.28□□□□□ -1.08
PDE4D-220ENST00000512069 ANKRD33BA6NCL7 494 aa8.27□□□□□ -1.09
PDE4D-220ENST00000512069 PCDH1Q08174 1060 aa8.27□□□□□ -1.09
PDE4D-220ENST00000512069 RPS26P11Q5JNZ5 115 aaPredicted RBP8.27□□□□□ -1.09
PDE4D-220ENST00000512069 DNAJC14Q6Y2X3 702 aaPredicted RBP8.27□□□□□ -1.09
PDE4D-220ENST00000512069 BCO2Q9BYV7 579 aa8.27□□□□□ -1.09
PDE4D-220ENST00000512069 GIPC1O14908 333 aa8.26□□□□□ -1.09
PDE4D-220ENST00000512069 P4HBP07237 508 aaKnown RBP8.26□□□□□ -1.09
PDE4D-220ENST00000512069 PI16Q6UXB8 463 aa8.26□□□□□ -1.09
PDE4D-220ENST00000512069 Q6ZS46 218 aa8.26□□□□□ -1.09
PDE4D-220ENST00000512069 ZNF576Q9H609 170 aa8.26□□□□□ -1.09
PDE4D-220ENST00000512069 WWC3Q9ULE0 1092 aa8.26□□□□□ -1.09
PDE4D-220ENST00000512069 XRCC5P13010 732 aaKnown RBP8.25□□□□□ -1.09
PDE4D-220ENST00000512069 ATP2B2Q01814 1243 aa8.25□□□□□ -1.09
PDE4D-220ENST00000512069 ERCC3P19447 782 aa8.24□□□□□ -1.09
PDE4D-220ENST00000512069 FGD1P98174 961 aa8.24□□□□□ -1.09
PDE4D-220ENST00000512069 CCDC27Q2M243 656 aa8.24□□□□□ -1.09
PDE4D-220ENST00000512069 PRR23CQ6ZRP0 262 aa8.24□□□□□ -1.09
PDE4D-220ENST00000512069 FRMD6Q96NE9 622 aa8.24□□□□□ -1.09
PDE4D-220ENST00000512069 SRCIN1Q9C0H9 1055 aa8.24□□□□□ -1.09
PDE4D-220ENST00000512069 ZBTB7CA1YPR0 619 aa8.23□□□□□ -1.09
PDE4D-220ENST00000512069 MEGF11A6BM72 1044 aa8.23□□□□□ -1.09
PDE4D-220ENST00000512069 B3GALT4O96024 378 aa8.23□□□□□ -1.09
PDE4D-220ENST00000512069 LDHBP07195 334 aaKnown RBP8.23□□□□□ -1.09
PDE4D-220ENST00000512069 ZMYM1Q5SVZ6 1142 aa8.23□□□□□ -1.09
PDE4D-220ENST00000512069 NXPE4Q6UWF7 544 aa8.23□□□□□ -1.09
PDE4D-220ENST00000512069 DDX54Q8TDD1 881 aaKnown RBP8.23□□□□□ -1.09
PDE4D-220ENST00000512069 SETDB2Q96T68 719 aa8.23□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 47.5 ms