RNA–Protein interactions for RNA: ENST00000511895.1

LINC01088-208, Transcript of long intergenic non-protein coding RNA 1088, humanhuman

TSL 2 BASIC

Gene LINC01088, Length 795 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01088-208ENST00000511895 GSK3AP49840 483 aa9.85□□□□□ -0.83
LINC01088-208ENST00000511895 FCGRTP55899 365 aa9.85□□□□□ -0.83
LINC01088-208ENST00000511895 PRPF40BQ6NWY9 871 aaKnown RBP9.85□□□□□ -0.83
LINC01088-208ENST00000511895 DTHD1Q6ZMT9 781 aa9.85□□□□□ -0.83
LINC01088-208ENST00000511895 ILDR2Q71H61 639 aa9.85□□□□□ -0.83
LINC01088-208ENST00000511895 VN1R5Q7Z5H4 357 aa9.85□□□□□ -0.83
LINC01088-208ENST00000511895 DCAF11Q8TEB1 546 aa9.85□□□□□ -0.83
LINC01088-208ENST00000511895 DUSP9Q99956 384 aaKnown RBP9.85□□□□□ -0.83
LINC01088-208ENST00000511895 ABCB6Q9NP58 842 aa9.85□□□□□ -0.83
LINC01088-208ENST00000511895 KRBA1A5PL33 1030 aa9.84□□□□□ -0.83
LINC01088-208ENST00000511895 PIP4K2BP78356 416 aa9.84□□□□□ -0.83
LINC01088-208ENST00000511895 GLIS3Q8NEA6 775 aa9.84□□□□□ -0.83
LINC01088-208ENST00000511895 NACC1Q96RE7 527 aa9.84□□□□□ -0.83
LINC01088-208ENST00000511895 BCL2L13Q9BXK5 485 aa9.84□□□□□ -0.83
LINC01088-208ENST00000511895 SEC31BQ9NQW1 1179 aa9.84□□□□□ -0.83
LINC01088-208ENST00000511895 USP21Q9UK80 565 aa9.84□□□□□ -0.83
LINC01088-208ENST00000511895 PCDH1Q08174 1060 aa9.83□□□□□ -0.84
LINC01088-208ENST00000511895 SHISA2Q6UWI4 295 aa9.83□□□□□ -0.84
LINC01088-208ENST00000511895 KLHL23Q8NBE8 558 aa9.83□□□□□ -0.84
LINC01088-208ENST00000511895 CLEC4MQ9H2X3 399 aaPredicted RBP9.83□□□□□ -0.84
LINC01088-208ENST00000511895 ESRRAP11474 423 aaPredicted RBP9.82□□□□□ -0.84
LINC01088-208ENST00000511895 XPCQ01831 940 aaPredicted RBP9.82□□□□□ -0.84
LINC01088-208ENST00000511895 C19orf57Q0VDD7 668 aa9.82□□□□□ -0.84
LINC01088-208ENST00000511895 FBXO33Q7Z6M2 555 aa9.82□□□□□ -0.84
LINC01088-208ENST00000511895 GALNT11Q8NCW6 608 aa9.82□□□□□ -0.84
LINC01088-208ENST00000511895 WNT8BQ93098 351 aa9.82□□□□□ -0.84
LINC01088-208ENST00000511895 AKAP2Q9Y2D5 859 aa9.82□□□□□ -0.84
LINC01088-208ENST00000511895 SOX1O00570 391 aaPredicted RBP9.81□□□□□ -0.84
LINC01088-208ENST00000511895 GIPC1O14908 333 aa9.81□□□□□ -0.84
LINC01088-208ENST00000511895 ITPKAP23677 461 aa9.81□□□□□ -0.84
LINC01088-208ENST00000511895 GNA15P30679 374 aa9.81□□□□□ -0.84
LINC01088-208ENST00000511895 CD68P34810 354 aaPredicted RBP9.81□□□□□ -0.84
LINC01088-208ENST00000511895 TAGLNQ01995 201 aaKnown RBP9.81□□□□□ -0.84
LINC01088-208ENST00000511895 HGSNATQ68CP4 663 aa9.81□□□□□ -0.84
LINC01088-208ENST00000511895 KLHDC7BQ96G42 594 aa9.81□□□□□ -0.84
LINC01088-208ENST00000511895 FRMD6Q96NE9 622 aa9.81□□□□□ -0.84
LINC01088-208ENST00000511895 OSBPL7Q9BZF2 842 aa9.81□□□□□ -0.84
LINC01088-208ENST00000511895 ZNF576Q9H609 170 aa9.81□□□□□ -0.84
LINC01088-208ENST00000511895 OSGEPQ9NPF4 335 aa9.81□□□□□ -0.84
LINC01088-208ENST00000511895 RNF19AQ9NV58 838 aa9.81□□□□□ -0.84
LINC01088-208ENST00000511895 PARP2Q9UGN5 583 aa9.81□□□□□ -0.84
LINC01088-208ENST00000511895 C9orf172C9J069 976 aa9.8□□□□□ -0.84
LINC01088-208ENST00000511895 DLL1O00548 723 aa9.8□□□□□ -0.84
LINC01088-208ENST00000511895 NLRP12P59046 1061 aa9.8□□□□□ -0.84
LINC01088-208ENST00000511895 PSMD2Q13200 908 aa9.8□□□□□ -0.84
LINC01088-208ENST00000511895 SUZ12Q15022 739 aaKnown RBP9.8□□□□□ -0.84
LINC01088-208ENST00000511895 IGF2-ASQ6U949 168 aa9.8□□□□□ -0.84
LINC01088-208ENST00000511895 GIPC2Q8TF65 315 aa9.8□□□□□ -0.84
LINC01088-208ENST00000511895 SRCIN1Q9C0H9 1055 aa9.8□□□□□ -0.84
LINC01088-208ENST00000511895 C12orf49Q9H741 205 aa9.8□□□□□ -0.84
LINC01088-208ENST00000511895 CCDC9Q9Y3X0 531 aaKnown RBP9.8□□□□□ -0.84
LINC01088-208ENST00000511895 C1QTNF9BB2RNN3 333 aa9.79□□□□□ -0.84
LINC01088-208ENST00000511895 XRCC5P13010 732 aaKnown RBP9.79□□□□□ -0.84
LINC01088-208ENST00000511895 SELPP16109 830 aa9.79□□□□□ -0.84
LINC01088-208ENST00000511895 EIF4BP23588 611 aaKnown RBP9.79□□□□□ -0.84
LINC01088-208ENST00000511895 GSTT1P30711 240 aa9.79□□□□□ -0.84
LINC01088-208ENST00000511895 GSTM4Q03013 218 aa9.79□□□□□ -0.84
LINC01088-208ENST00000511895 PTPN12Q05209 780 aaKnown RBP9.79□□□□□ -0.84
LINC01088-208ENST00000511895 ZNF423Q2M1K9 1284 aa9.79□□□□□ -0.84
LINC01088-208ENST00000511895 ZFYVE1Q9HBF4 777 aa9.79□□□□□ -0.84
LINC01088-208ENST00000511895 DDX3YO15523 660 aaKnown RBP9.78□□□□□ -0.84
LINC01088-208ENST00000511895 CHRNA4P43681 627 aa9.78□□□□□ -0.84
LINC01088-208ENST00000511895 FOXD4L6Q3SYB3 417 aaPredicted RBP9.78□□□□□ -0.84
LINC01088-208ENST00000511895 ZNF326Q5BKZ1 582 aaKnown RBP9.78□□□□□ -0.84
LINC01088-208ENST00000511895 FOXD4L3Q6VB84 417 aaPredicted RBP9.78□□□□□ -0.84
LINC01088-208ENST00000511895 CD163Q86VB7 1156 aa9.78□□□□□ -0.84
LINC01088-208ENST00000511895 DDX54Q8TDD1 881 aaKnown RBP9.78□□□□□ -0.84
LINC01088-208ENST00000511895 USP17L7P0C7H9 530 aa9.77□□□□□ -0.85
LINC01088-208ENST00000511895 ZNF157P51786 506 aaPredicted RBP9.77□□□□□ -0.85
LINC01088-208ENST00000511895 NRG1Q02297 640 aaPredicted RBP9.77□□□□□ -0.85
LINC01088-208ENST00000511895 DUOXA2Q1HG44 320 aa9.77□□□□□ -0.85
LINC01088-208ENST00000511895 PLA2G4EQ3MJ16 856 aa9.77□□□□□ -0.85
LINC01088-208ENST00000511895 LENG1Q96BZ8 264 aaPredicted RBP9.77□□□□□ -0.85
LINC01088-208ENST00000511895 FAM161BQ96MY7 647 aa9.77□□□□□ -0.85
LINC01088-208ENST00000511895 USP26Q9BXU7 913 aa9.77□□□□□ -0.85
LINC01088-208ENST00000511895 MRPL18Q9H0U6 180 aaKnown RBP9.77□□□□□ -0.85
LINC01088-208ENST00000511895 MRS2Q9HD23 443 aa9.77□□□□□ -0.85
LINC01088-208ENST00000511895 KCNK4Q9NYG8 393 aa9.77□□□□□ -0.85
LINC01088-208ENST00000511895 FAM8A1Q9UBU6 413 aa9.77□□□□□ -0.85
LINC01088-208ENST00000511895 GPN3Q9UHW5 284 aaPredicted RBP9.77□□□□□ -0.85
LINC01088-208ENST00000511895 RPS26P11Q5JNZ5 115 aaPredicted RBP9.76□□□□□ -0.85
LINC01088-208ENST00000511895 BCL11AQ9H165 835 aa9.76□□□□□ -0.85
LINC01088-208ENST00000511895 SOX17Q9H6I2 414 aaPredicted RBP9.76□□□□□ -0.85
LINC01088-208ENST00000511895 PODXL2Q9NZ53 605 aa9.76□□□□□ -0.85
LINC01088-208ENST00000511895 AK5Q9Y6K8 562 aa9.76□□□□□ -0.85
LINC01088-208ENST00000511895 B3GALT4O96024 378 aa9.75□□□□□ -0.85
LINC01088-208ENST00000511895 ACAD11Q709F0 780 aa9.75□□□□□ -0.85
LINC01088-208ENST00000511895 UBASH3BQ8TF42 649 aa9.75□□□□□ -0.85
LINC01088-208ENST00000511895 EIF4EBP3O60516 100 aaPredicted RBP9.74□□□□□ -0.85
LINC01088-208ENST00000511895 ADAM11O75078 769 aa9.74□□□□□ -0.85
LINC01088-208ENST00000511895 DAB2P98082 770 aa9.74□□□□□ -0.85
LINC01088-208ENST00000511895 FAAP100Q0VG06 881 aa9.74□□□□□ -0.85
LINC01088-208ENST00000511895 GPAT2Q6NUI2 795 aa9.74□□□□□ -0.85
LINC01088-208ENST00000511895 C3orf58Q8NDZ4 430 aa9.74□□□□□ -0.85
LINC01088-208ENST00000511895 FOXD4L4Q8WXT5 416 aaPredicted RBP9.74□□□□□ -0.85
LINC01088-208ENST00000511895 WISP1O95388 367 aa9.73□□□□□ -0.85
LINC01088-208ENST00000511895 PPP2R3AQ06190 1150 aa9.73□□□□□ -0.85
LINC01088-208ENST00000511895 MBTPS1Q14703 1052 aa9.73□□□□□ -0.85
LINC01088-208ENST00000511895 TPTE2Q6XPS3 522 aa9.73□□□□□ -0.85
LINC01088-208ENST00000511895 AKTIPQ9H8T0 292 aa9.73□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms