RNA–Protein interactions for RNA: ENST00000511816.1

CALCOCO2-220, Transcript of calcium binding and coiled-coil domain 2, humanhuman

TSL 2

Gene CALCOCO2, Length 562 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALCOCO2-220ENST00000511816 TMEM238LA0A1B0GVL6 79 aa6.38□□□□□ -1.39
CALCOCO2-220ENST00000511816 AFF1P51825 1210 aaKnown RBP6.38□□□□□ -1.39
CALCOCO2-220ENST00000511816 DDX54Q8TDD1 881 aaKnown RBP6.38□□□□□ -1.39
CALCOCO2-220ENST00000511816 NXPE3Q969Y0 559 aa6.38□□□□□ -1.39
CALCOCO2-220ENST00000511816 BHLHE41Q9C0J9 482 aaPredicted RBP6.38□□□□□ -1.39
CALCOCO2-220ENST00000511816 MUC3BQ9H195 1237 aa6.38□□□□□ -1.39
CALCOCO2-220ENST00000511816 RASSF4Q9H2L5 321 aa6.38□□□□□ -1.39
CALCOCO2-220ENST00000511816 LATS2Q9NRM7 1088 aa6.38□□□□□ -1.39
CALCOCO2-220ENST00000511816 A0A096LPE4 126 aa6.37□□□□□ -1.39
CALCOCO2-220ENST00000511816 A0A1W2PPZ6 126 aa6.37□□□□□ -1.39
CALCOCO2-220ENST00000511816 RECKO95980 971 aa6.37□□□□□ -1.39
CALCOCO2-220ENST00000511816 RLBP1P12271 317 aa6.37□□□□□ -1.39
CALCOCO2-220ENST00000511816 HOXB4P17483 251 aaPredicted RBP6.37□□□□□ -1.39
CALCOCO2-220ENST00000511816 ST13P50502 369 aaKnown RBP6.37□□□□□ -1.39
CALCOCO2-220ENST00000511816 MSL1Q68DK7 614 aa6.37□□□□□ -1.39
CALCOCO2-220ENST00000511816 GDF6Q6KF10 455 aaPredicted RBP6.37□□□□□ -1.39
CALCOCO2-220ENST00000511816 C8orf86Q6ZUL3 223 aa6.37□□□□□ -1.39
CALCOCO2-220ENST00000511816 BSNDQ8WZ55 320 aa6.37□□□□□ -1.39
CALCOCO2-220ENST00000511816 RNF34Q969K3 372 aa6.37□□□□□ -1.39
CALCOCO2-220ENST00000511816 TRIM11Q96F44 468 aa6.37□□□□□ -1.39
CALCOCO2-220ENST00000511816 DCAF5Q96JK2 942 aa6.37□□□□□ -1.39
CALCOCO2-220ENST00000511816 CEP44Q9C0F1 390 aa6.37□□□□□ -1.39
CALCOCO2-220ENST00000511816 TTF2Q9UNY4 1162 aaKnown RBP6.37□□□□□ -1.39
CALCOCO2-220ENST00000511816 AKAP2Q9Y2D5 859 aa6.37□□□□□ -1.39
CALCOCO2-220ENST00000511816 USP31Q70CQ4 1352 aa6.36□□□□□ -1.39
CALCOCO2-220ENST00000511816 NID1P14543 1247 aa6.36□□□□□ -1.39
CALCOCO2-220ENST00000511816 ZNF76P36508 570 aa6.36□□□□□ -1.39
CALCOCO2-220ENST00000511816 SUZ12Q15022 739 aaKnown RBP6.36□□□□□ -1.39
CALCOCO2-220ENST00000511816 RPS26P11Q5JNZ5 115 aaPredicted RBP6.36□□□□□ -1.39
CALCOCO2-220ENST00000511816 DIEXFQ68CQ4 756 aaKnown RBP6.36□□□□□ -1.39
CALCOCO2-220ENST00000511816 FAM117BQ6P1L5 589 aa6.36□□□□□ -1.39
CALCOCO2-220ENST00000511816 HS2ST1Q7LGA3 356 aa6.36□□□□□ -1.39
CALCOCO2-220ENST00000511816 DTWD1Q8N5C7 304 aa6.36□□□□□ -1.39
CALCOCO2-220ENST00000511816 TCF12Q99081 682 aa6.36□□□□□ -1.39
CALCOCO2-220ENST00000511816 SRA1Q9HD15 236 aaKnown RBP6.36□□□□□ -1.39
CALCOCO2-220ENST00000511816 RNF19AQ9NV58 838 aa6.36□□□□□ -1.39
CALCOCO2-220ENST00000511816 IGHA1P01876 353 aa6.35□□□□□ -1.39
CALCOCO2-220ENST00000511816 ITPKAP23677 461 aa6.35□□□□□ -1.39
CALCOCO2-220ENST00000511816 ARL4DP49703 201 aa6.35□□□□□ -1.39
CALCOCO2-220ENST00000511816 ATP11AP98196 1134 aa6.35□□□□□ -1.39
CALCOCO2-220ENST00000511816 PPP2R3AQ06190 1150 aa6.35□□□□□ -1.39
CALCOCO2-220ENST00000511816 PWP1Q13610 501 aa6.35□□□□□ -1.39
CALCOCO2-220ENST00000511816 MAP4K3Q8IVH8 894 aa6.35□□□□□ -1.39
CALCOCO2-220ENST00000511816 DMRTC2Q8IXT2 367 aaPredicted RBP6.35□□□□□ -1.39
CALCOCO2-220ENST00000511816 IL22RA1Q8N6P7 574 aa6.35□□□□□ -1.39
CALCOCO2-220ENST00000511816 ANKRD24Q8TF21 1146 aa6.35□□□□□ -1.39
CALCOCO2-220ENST00000511816 POP1Q99575 1024 aaKnown RBP6.35□□□□□ -1.39
CALCOCO2-220ENST00000511816 ABCB6Q9NP58 842 aa6.35□□□□□ -1.39
CALCOCO2-220ENST00000511816 SAMM50Q9Y512 469 aa6.35□□□□□ -1.39
CALCOCO2-220ENST00000511816 NFKBIEO00221 500 aa6.34□□□□□ -1.39
CALCOCO2-220ENST00000511816 ELNP15502 786 aa6.34□□□□□ -1.39
CALCOCO2-220ENST00000511816 CDC27P30260 824 aa6.34□□□□□ -1.39
CALCOCO2-220ENST00000511816 HNRNPUQ00839 825 aaKnown RBP eCLIP6.34□□□□□ -1.39
CALCOCO2-220ENST00000511816 SV2BQ7L1I2 683 aa6.34□□□□□ -1.39
CALCOCO2-220ENST00000511816 GLIS3Q8NEA6 775 aa6.34□□□□□ -1.39
CALCOCO2-220ENST00000511816 NOC4LQ9BVI4 516 aaKnown RBP6.34□□□□□ -1.39
CALCOCO2-220ENST00000511816 CLEC4MQ9H2X3 399 aaPredicted RBP6.34□□□□□ -1.39
CALCOCO2-220ENST00000511816 PPME1Q9Y570 386 aa6.34□□□□□ -1.39
CALCOCO2-220ENST00000511816 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP6.34□□□□□ -1.39
CALCOCO2-220ENST00000511816 A0A0A0MRY4 1105 aa6.33□□□□□ -1.4
CALCOCO2-220ENST00000511816 TRPA1O75762 1119 aa6.33□□□□□ -1.4
CALCOCO2-220ENST00000511816 CTSHP09668 335 aa6.33□□□□□ -1.4
CALCOCO2-220ENST00000511816 ACPPP15309 386 aa6.33□□□□□ -1.4
CALCOCO2-220ENST00000511816 COL8A1P27658 744 aa6.33□□□□□ -1.4
CALCOCO2-220ENST00000511816 GRIA4P48058 902 aa6.33□□□□□ -1.4
CALCOCO2-220ENST00000511816 GPAT2Q6NUI2 795 aa6.33□□□□□ -1.4
CALCOCO2-220ENST00000511816 LACRTQ9GZZ8 138 aa6.33□□□□□ -1.4
CALCOCO2-220ENST00000511816 ADAM19Q9H013 955 aa6.33□□□□□ -1.4
CALCOCO2-220ENST00000511816 GPN3Q9UHW5 284 aaPredicted RBP6.33□□□□□ -1.4
CALCOCO2-220ENST00000511816 C9orf172C9J069 976 aa6.32□□□□□ -1.4
CALCOCO2-220ENST00000511816 LMNB1P20700 586 aa6.32□□□□□ -1.4
CALCOCO2-220ENST00000511816 ERCC5P28715 1186 aaPredicted RBP6.32□□□□□ -1.4
CALCOCO2-220ENST00000511816 NRG1Q02297 640 aaPredicted RBP6.32□□□□□ -1.4
CALCOCO2-220ENST00000511816 CCDC85BQ15834 202 aaPredicted RBP6.32□□□□□ -1.4
CALCOCO2-220ENST00000511816 RELL1Q8IUW5 271 aa6.32□□□□□ -1.4
CALCOCO2-220ENST00000511816 C3orf58Q8NDZ4 430 aa6.32□□□□□ -1.4
CALCOCO2-220ENST00000511816 ZNF576Q9H609 170 aa6.32□□□□□ -1.4
CALCOCO2-220ENST00000511816 USP21Q9UK80 565 aa6.32□□□□□ -1.4
CALCOCO2-220ENST00000511816 FAM229AH3BQW9 127 aa6.31□□□□□ -1.4
CALCOCO2-220ENST00000511816 MSTNO14793 375 aa6.31□□□□□ -1.4
CALCOCO2-220ENST00000511816 FANCCQ00597 558 aa6.31□□□□□ -1.4
CALCOCO2-220ENST00000511816 IKBKEQ14164 716 aa6.31□□□□□ -1.4
CALCOCO2-220ENST00000511816 SPRED3Q2MJR0 410 aa6.31□□□□□ -1.4
CALCOCO2-220ENST00000511816 PLA2G4EQ3MJ16 856 aa6.31□□□□□ -1.4
CALCOCO2-220ENST00000511816 MEI1Q5TIA1 1274 aa6.31□□□□□ -1.4
CALCOCO2-220ENST00000511816 FMR1NBQ8N0W7 255 aaPredicted RBP6.31□□□□□ -1.4
CALCOCO2-220ENST00000511816 WNT8BQ93098 351 aa6.31□□□□□ -1.4
CALCOCO2-220ENST00000511816 TMEM39AQ9NV64 488 aa6.31□□□□□ -1.4
CALCOCO2-220ENST00000511816 GGT7Q9UJ14 662 aa6.31□□□□□ -1.4
CALCOCO2-220ENST00000511816 TRIM33Q9UPN9 1127 aa6.31□□□□□ -1.4
CALCOCO2-220ENST00000511816 METTL12A8MUP2 240 aa6.3□□□□□ -1.4
CALCOCO2-220ENST00000511816 H3BRJ5 948 aa6.3□□□□□ -1.4
CALCOCO2-220ENST00000511816 PCDH1Q08174 1060 aa6.3□□□□□ -1.4
CALCOCO2-220ENST00000511816 COL9A3Q14050 684 aaPredicted RBP6.3□□□□□ -1.4
CALCOCO2-220ENST00000511816 GRIK5Q16478 980 aa6.3□□□□□ -1.4
CALCOCO2-220ENST00000511816 TPTE2Q6XPS3 522 aa6.3□□□□□ -1.4
CALCOCO2-220ENST00000511816 FBXO11Q86XK2 927 aa6.3□□□□□ -1.4
CALCOCO2-220ENST00000511816 HHIPQ96QV1 700 aa6.3□□□□□ -1.4
CALCOCO2-220ENST00000511816 RSRP1Q9BUV0 290 aa6.3□□□□□ -1.4
CALCOCO2-220ENST00000511816 EMILIN2Q9BXX0 1053 aa6.3□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 50.8 ms