RNA–Protein interactions for RNA: ENST00000511653.1

COPS4-209, Transcript of COP9 signalosome subunit 4, humanhuman

TSL 1 (best) BASIC

Gene COPS4, Length 1,695 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS4-209ENST00000511653 AGERQ15109 404 aa8.96□□□□□ -0.98
COPS4-209ENST00000511653 CC2D1BQ5T0F9 858 aaKnown RBP8.96□□□□□ -0.98
COPS4-209ENST00000511653 BICDL1Q6ZP65 573 aa8.96□□□□□ -0.98
COPS4-209ENST00000511653 C2CD5Q86YS7 1000 aa8.96□□□□□ -0.98
COPS4-209ENST00000511653 ZNF496Q96IT1 587 aaPredicted RBP8.96□□□□□ -0.98
COPS4-209ENST00000511653 C1QTNF2Q9BXJ5 285 aa8.96□□□□□ -0.98
COPS4-209ENST00000511653 DIAPH1O60610 1272 aaKnown RBP8.95□□□□□ -0.98
COPS4-209ENST00000511653 LMNB1P20700 586 aa8.95□□□□□ -0.98
COPS4-209ENST00000511653 TRIM32Q13049 653 aa8.95□□□□□ -0.98
COPS4-209ENST00000511653 NCOA4Q13772 614 aa8.95□□□□□ -0.98
COPS4-209ENST00000511653 TBC1D9BQ66K14 1250 aa8.95□□□□□ -0.98
COPS4-209ENST00000511653 TRAF7Q6Q0C0 670 aa8.95□□□□□ -0.98
COPS4-209ENST00000511653 DZIP3Q86Y13 1208 aaKnown RBP8.95□□□□□ -0.98
COPS4-209ENST00000511653 RNF135Q8IUD6 432 aa8.95□□□□□ -0.98
COPS4-209ENST00000511653 TTLL6Q8N841 843 aa8.95□□□□□ -0.98
COPS4-209ENST00000511653 JMYQ8N9B5 988 aa8.95□□□□□ -0.98
COPS4-209ENST00000511653 HEG1Q9ULI3 1381 aa8.95□□□□□ -0.98
COPS4-209ENST00000511653 CNGB1Q14028 1251 aaPredicted RBP8.94□□□□□ -0.98
COPS4-209ENST00000511653 SLFNL1Q499Z3 407 aa8.94□□□□□ -0.98
COPS4-209ENST00000511653 COL13A1Q5TAT6 717 aaPredicted RBP8.94□□□□□ -0.98
COPS4-209ENST00000511653 BPHLQ86WA6 291 aaPredicted RBP8.94□□□□□ -0.98
COPS4-209ENST00000511653 ANKLE1Q8NAG6 615 aa8.94□□□□□ -0.98
COPS4-209ENST00000511653 PLPP7Q8NBV4 271 aa8.94□□□□□ -0.98
COPS4-209ENST00000511653 IL17REQ8NFR9 667 aa8.94□□□□□ -0.98
COPS4-209ENST00000511653 CCER1Q8TC90 406 aaPredicted RBP8.94□□□□□ -0.98
COPS4-209ENST00000511653 ZMIZ1Q9ULJ6 1067 aa8.94□□□□□ -0.98
COPS4-209ENST00000511653 GLTPD2A6NH11 291 aa8.94□□□□□ -0.98
COPS4-209ENST00000511653 H0YIN7 160 aa8.94□□□□□ -0.98
COPS4-209ENST00000511653 MMRN1Q13201 1228 aa8.94□□□□□ -0.98
COPS4-209ENST00000511653 PRR5LQ6MZQ0 368 aa8.94□□□□□ -0.98
COPS4-209ENST00000511653 TTC5Q8N0Z6 440 aa8.94□□□□□ -0.98
COPS4-209ENST00000511653 SMC1BQ8NDV3 1235 aa8.94□□□□□ -0.98
COPS4-209ENST00000511653 TMEM88BA6NKF7 163 aa8.93□□□□□ -0.98
COPS4-209ENST00000511653 POTECB2RU33 542 aa8.93□□□□□ -0.98
COPS4-209ENST00000511653 U2SURPO15042 1029 aaKnown RBP8.93□□□□□ -0.98
COPS4-209ENST00000511653 KCNQ3O43525 872 aa8.93□□□□□ -0.98
COPS4-209ENST00000511653 ATG7O95352 703 aa8.93□□□□□ -0.98
COPS4-209ENST00000511653 STARD3NLO95772 234 aa8.93□□□□□ -0.98
COPS4-209ENST00000511653 CRTC2Q53ET0 693 aaPredicted RBP8.93□□□□□ -0.98
COPS4-209ENST00000511653 ZNF790Q6PG37 636 aa8.93□□□□□ -0.98
COPS4-209ENST00000511653 LIAT1Q6ZQX7 453 aa8.93□□□□□ -0.98
COPS4-209ENST00000511653 PLEKHM2Q8IWE5 1019 aa8.93□□□□□ -0.98
COPS4-209ENST00000511653 DLG5Q8TDM6 1919 aa8.93□□□□□ -0.98
COPS4-209ENST00000511653 VRTNQ9H8Y1 702 aa8.93□□□□□ -0.98
COPS4-209ENST00000511653 EIF4ENIF1Q9NRA8 985 aaKnown RBP8.93□□□□□ -0.98
COPS4-209ENST00000511653 LAMB4A4D0S4 1761 aa8.92□□□□□ -0.98
COPS4-209ENST00000511653 CEMIPQ8WUJ3 1361 aa8.92□□□□□ -0.98
COPS4-209ENST00000511653 GNAT3A8MTJ3 354 aa8.92□□□□□ -0.98
COPS4-209ENST00000511653 C21orf2O43822 256 aa8.92□□□□□ -0.98
COPS4-209ENST00000511653 A1BGP04217 495 aa8.92□□□□□ -0.98
COPS4-209ENST00000511653 PIP4K2AP48426 406 aaPredicted RBP8.92□□□□□ -0.98
COPS4-209ENST00000511653 TEFQ10587 303 aa8.92□□□□□ -0.98
COPS4-209ENST00000511653 STK32AQ8WU08 396 aa8.92□□□□□ -0.98
COPS4-209ENST00000511653 ZNF622Q969S3 477 aaKnown RBP eCLIP8.92□□□□□ -0.981e-7■■□□□ 12.1
COPS4-209ENST00000511653 PODXL2Q9NZ53 605 aa8.92□□□□□ -0.98
COPS4-209ENST00000511653 MKRN1Q9UHC7 482 aaKnown RBP8.92□□□□□ -0.98
COPS4-209ENST00000511653 NPC1L1Q9UHC9 1359 aa8.91□□□□□ -0.98
COPS4-209ENST00000511653 A0A087WZG4 1122 aa8.91□□□□□ -0.98
COPS4-209ENST00000511653 CAMTA2O94983 1202 aa8.91□□□□□ -0.98
COPS4-209ENST00000511653 VEGFAP15692 232 aaPredicted RBP8.91□□□□□ -0.98
COPS4-209ENST00000511653 PHACTR3Q96KR7 559 aa8.91□□□□□ -0.98
COPS4-209ENST00000511653 PCDH10Q9P2E7 1040 aa8.91□□□□□ -0.98
COPS4-209ENST00000511653 SCN4AP35499 1836 aa8.91□□□□□ -0.98
COPS4-209ENST00000511653 PRAMEF22A3QJZ6 481 aa8.91□□□□□ -0.98
COPS4-209ENST00000511653 IL6STP40189 918 aaPredicted RBP8.91□□□□□ -0.98
COPS4-209ENST00000511653 GAS2L2Q8NHY3 880 aa8.91□□□□□ -0.98
COPS4-209ENST00000511653 BRIP1Q9BX63 1249 aa8.91□□□□□ -0.98
COPS4-209ENST00000511653 NUP98P52948 1817 aa8.9□□□□□ -0.98
COPS4-209ENST00000511653 ZBTB24O43167 697 aaPredicted RBP8.9□□□□□ -0.98
COPS4-209ENST00000511653 CNBD1Q8NA66 436 aa8.9□□□□□ -0.98
COPS4-209ENST00000511653 FMNL2Q96PY5 1086 aa8.9□□□□□ -0.98
COPS4-209ENST00000511653 KDM3BQ7LBC6 1761 aa8.9□□□□□ -0.99
COPS4-209ENST00000511653 ESPNB1AK53 854 aa8.89□□□□□ -0.99
COPS4-209ENST00000511653 PRKAR2BP31323 418 aa8.89□□□□□ -0.99
COPS4-209ENST00000511653 PDE6BP35913 854 aa8.89□□□□□ -0.99
COPS4-209ENST00000511653 CLDN10P78369 228 aa8.89□□□□□ -0.99
COPS4-209ENST00000511653 TMEM164Q5U3C3 297 aa8.89□□□□□ -0.99
COPS4-209ENST00000511653 PRPF40BQ6NWY9 871 aaKnown RBP8.89□□□□□ -0.99
COPS4-209ENST00000511653 SLC10A4Q96EP9 437 aa8.89□□□□□ -0.99
COPS4-209ENST00000511653 KIAA1024Q9UPX6 916 aa8.89□□□□□ -0.99
COPS4-209ENST00000511653 ADAMTSL1Q8N6G6 1762 aa8.89□□□□□ -0.99
COPS4-209ENST00000511653 LTBP3Q9NS15 1303 aa8.88□□□□□ -0.99
COPS4-209ENST00000511653 HSPA1AP0DMV8 641 aaKnown RBP8.88□□□□□ -0.99
COPS4-209ENST00000511653 HSPA1BP0DMV9 641 aaKnown RBP8.88□□□□□ -0.99
COPS4-209ENST00000511653 SRGNP10124 158 aa8.88□□□□□ -0.99
COPS4-209ENST00000511653 RAB15P59190 212 aa8.88□□□□□ -0.99
COPS4-209ENST00000511653 MCCD1P59942 119 aaPredicted RBP8.88□□□□□ -0.99
COPS4-209ENST00000511653 TRMT44Q8IYL2 757 aaKnown RBP8.88□□□□□ -0.99
COPS4-209ENST00000511653 SETDB2Q96T68 719 aa8.88□□□□□ -0.99
COPS4-209ENST00000511653 TEX13AQ9BXU3 409 aaPredicted RBP8.88□□□□□ -0.99
COPS4-209ENST00000511653 TAOK3Q9H2K8 898 aa8.88□□□□□ -0.99
COPS4-209ENST00000511653 USP16Q9Y5T5 823 aa8.88□□□□□ -0.99
COPS4-209ENST00000511653 BTBD11A6QL63 1104 aa8.88□□□□□ -0.99
COPS4-209ENST00000511653 USP17L15C9J2P7 530 aa8.88□□□□□ -0.99
COPS4-209ENST00000511653 USP17L10C9JJH3 530 aa8.88□□□□□ -0.99
COPS4-209ENST00000511653 USP17L13C9JLJ4 530 aa8.88□□□□□ -0.99
COPS4-209ENST00000511653 USP17L12C9JPN9 530 aa8.88□□□□□ -0.99
COPS4-209ENST00000511653 USP17L11C9JVI0 530 aa8.88□□□□□ -0.99
COPS4-209ENST00000511653 USP17L21D6R901 530 aa8.88□□□□□ -0.99
COPS4-209ENST00000511653 USP17L18D6R9N7 530 aa8.88□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 47.3 ms