RNA–Protein interactions for RNA: ENST00000511633.5

NEK1-207, Transcript of NIMA related kinase 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene NEK1, Length 5,536 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK1-207ENST00000511633 CCDC174Q6PII3 467 aa10.34□□□□□ -0.75
NEK1-207ENST00000511633 SNX21Q969T3 373 aa10.34□□□□□ -0.75
NEK1-207ENST00000511633 HELLSQ9NRZ9 838 aa10.34□□□□□ -0.75
NEK1-207ENST00000511633 BABAM1Q9NWV8 329 aa10.34□□□□□ -0.75
NEK1-207ENST00000511633 CCDC66A2RUB6 948 aa10.34□□□□□ -0.75
NEK1-207ENST00000511633 SPDYE3A6NKU9 549 aa10.34□□□□□ -0.75
NEK1-207ENST00000511633 HIBADHP31937 336 aaKnown RBP10.34□□□□□ -0.75
NEK1-207ENST00000511633 LRSAM1Q6UWE0 723 aa10.34□□□□□ -0.75
NEK1-207ENST00000511633 PDCL2Q8N4E4 241 aa10.34□□□□□ -0.75
NEK1-207ENST00000511633 ALS2CR12Q96Q35 445 aa10.34□□□□□ -0.75
NEK1-207ENST00000511633 RAD50Q92878 1312 aa10.33□□□□□ -0.76
NEK1-207ENST00000511633 SPTLC2O15270 562 aa10.33□□□□□ -0.76
NEK1-207ENST00000511633 NEMFO60524 1076 aa10.33□□□□□ -0.76
NEK1-207ENST00000511633 PAFAH1B1P43034 410 aa10.33□□□□□ -0.76
NEK1-207ENST00000511633 TEX11Q8IYF3 940 aa10.33□□□□□ -0.76
NEK1-207ENST00000511633 ARHGEF10O15013 1369 aa10.33□□□□□ -0.76
NEK1-207ENST00000511633 SEC24BO95487 1268 aa10.33□□□□□ -0.76
NEK1-207ENST00000511633 UBASH3AP57075 661 aa10.33□□□□□ -0.76
NEK1-207ENST00000511633 PRPF4BQ13523 1007 aaKnown RBP10.33□□□□□ -0.76
NEK1-207ENST00000511633 USP26Q9BXU7 913 aa10.33□□□□□ -0.76
NEK1-207ENST00000511633 GJA3Q9Y6H8 435 aa10.33□□□□□ -0.76
NEK1-207ENST00000511633 RTL1A6NKG5 1358 aa10.33□□□□□ -0.76
NEK1-207ENST00000511633 SAMD9Q5K651 1589 aa10.33□□□□□ -0.76
NEK1-207ENST00000511633 GSTTP1A0A1W2PQM5 241 aa10.33□□□□□ -0.76
NEK1-207ENST00000511633 HOXB7P09629 217 aa10.33□□□□□ -0.76
NEK1-207ENST00000511633 ZNF496Q96IT1 587 aaPredicted RBP10.33□□□□□ -0.76
NEK1-207ENST00000511633 STK32BQ9NY57 414 aa10.33□□□□□ -0.76
NEK1-207ENST00000511633 NDUFB9Q9Y6M9 179 aa10.33□□□□□ -0.76
NEK1-207ENST00000511633 B4E1Z4 1266 aa10.32□□□□□ -0.76
NEK1-207ENST00000511633 CTNNA2P26232 953 aa10.32□□□□□ -0.76
NEK1-207ENST00000511633 CALML3P27482 149 aa10.32□□□□□ -0.76
NEK1-207ENST00000511633 GBP3Q9H0R5 595 aa10.32□□□□□ -0.76
NEK1-207ENST00000511633 DNAJC25Q9H1X3 360 aa10.32□□□□□ -0.76
NEK1-207ENST00000511633 PTPRTO14522 1441 aa10.32□□□□□ -0.76
NEK1-207ENST00000511633 NF2P35240 595 aa10.32□□□□□ -0.76
NEK1-207ENST00000511633 RAB3GAP1Q15042 981 aa10.32□□□□□ -0.76
NEK1-207ENST00000511633 AOPEPQ8N6M6 819 aa10.32□□□□□ -0.76
NEK1-207ENST00000511633 NPC1L1Q9UHC9 1359 aa10.32□□□□□ -0.76
NEK1-207ENST00000511633 PNMA6EA0A0J9YXQ4 647 aa10.32□□□□□ -0.76
NEK1-207ENST00000511633 DHX37Q8IY37 1157 aaKnown RBP10.32□□□□□ -0.76
NEK1-207ENST00000511633 TMEM87AQ8NBN3 555 aa10.32□□□□□ -0.76
NEK1-207ENST00000511633 USP21Q9UK80 565 aa10.32□□□□□ -0.76
NEK1-207ENST00000511633 YEATS2Q9ULM3 1422 aa10.32□□□□□ -0.76
NEK1-207ENST00000511633 PLIN2Q99541 437 aa10.32□□□□□ -0.76
NEK1-207ENST00000511633 GGA1Q9UJY5 639 aa10.32□□□□□ -0.76
NEK1-207ENST00000511633 ZBTB21Q9ULJ3 1066 aa10.32□□□□□ -0.76
NEK1-207ENST00000511633 ZMYM4Q5VZL5 1548 aa10.32□□□□□ -0.76
NEK1-207ENST00000511633 CAVIN2O95810 425 aa10.32□□□□□ -0.76
NEK1-207ENST00000511633 EIF6P56537 245 aaKnown RBP10.32□□□□□ -0.76
NEK1-207ENST00000511633 UVSSAQ2YD98 709 aa10.32□□□□□ -0.76
NEK1-207ENST00000511633 PARP1P09874 1014 aaKnown RBP10.31□□□□□ -0.76
NEK1-207ENST00000511633 SNW1Q13573 536 aaKnown RBP10.31□□□□□ -0.76
NEK1-207ENST00000511633 GCKRQ14397 625 aa10.31□□□□□ -0.76
NEK1-207ENST00000511633 TTC6Q86TZ1 520 aa10.31□□□□□ -0.76
NEK1-207ENST00000511633 NEO1Q92859 1461 aa10.31□□□□□ -0.76
NEK1-207ENST00000511633 SPDYE4A6NLX3 237 aa10.31□□□□□ -0.76
NEK1-207ENST00000511633 EIF4A1P60842 406 aaKnown RBP10.31□□□□□ -0.76
NEK1-207ENST00000511633 FAM227BQ96M60 508 aa10.31□□□□□ -0.76
NEK1-207ENST00000511633 MAGI3Q5TCQ9 1506 aa10.31□□□□□ -0.76
NEK1-207ENST00000511633 KRT79Q5XKE5 535 aa10.31□□□□□ -0.76
NEK1-207ENST00000511633 VTI1AQ96AJ9 217 aa10.31□□□□□ -0.76
NEK1-207ENST00000511633 ZNF830Q96NB3 372 aaPredicted RBP10.31□□□□□ -0.76
NEK1-207ENST00000511633 GPCPD1Q9NPB8 672 aa10.31□□□□□ -0.76
NEK1-207ENST00000511633 JADE2Q9NQC1 790 aa10.31□□□□□ -0.76
NEK1-207ENST00000511633 PLEKHG3A1L390 1219 aa10.31□□□□□ -0.76
NEK1-207ENST00000511633 IFFO1Q0D2I5 559 aa10.31□□□□□ -0.76
NEK1-207ENST00000511633 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP10.3□□□□□ -0.76
NEK1-207ENST00000511633 ADGBQ8N7X0 1667 aa10.3□□□□□ -0.76
NEK1-207ENST00000511633 AKR1B10O60218 316 aa10.3□□□□□ -0.76
NEK1-207ENST00000511633 MAP9Q49MG5 647 aa10.3□□□□□ -0.76
NEK1-207ENST00000511633 SPAG5Q96R06 1193 aa10.3□□□□□ -0.76
NEK1-207ENST00000511633 PSMA7O14818 248 aa10.3□□□□□ -0.76
NEK1-207ENST00000511633 SLC27A2O14975 620 aa10.3□□□□□ -0.76
NEK1-207ENST00000511633 SP4Q02446 784 aa10.3□□□□□ -0.76
NEK1-207ENST00000511633 DYDC1Q8WWB3 177 aa10.3□□□□□ -0.76
NEK1-207ENST00000511633 KCNQ3O43525 872 aa10.3□□□□□ -0.76
NEK1-207ENST00000511633 PRDM1O75626 825 aa10.3□□□□□ -0.76
NEK1-207ENST00000511633 KRT13P13646 458 aa10.3□□□□□ -0.76
NEK1-207ENST00000511633 RPS6KB1P23443 525 aa10.3□□□□□ -0.76
NEK1-207ENST00000511633 GNA11P29992 359 aa10.3□□□□□ -0.76
NEK1-207ENST00000511633 RBM28Q9NW13 759 aaKnown RBP10.3□□□□□ -0.76
NEK1-207ENST00000511633 AATFQ9NY61 560 aaKnown RBP eCLIP10.3□□□□□ -0.76
NEK1-207ENST00000511633 PLXNC1O60486 1568 aa10.3□□□□□ -0.76
NEK1-207ENST00000511633 PHACTR2O75167 634 aa10.3□□□□□ -0.76
NEK1-207ENST00000511633 CTAGE1Q96RT6 745 aa10.3□□□□□ -0.76
NEK1-207ENST00000511633 EZRP15311 586 aaKnown RBP10.29□□□□□ -0.76
NEK1-207ENST00000511633 LMOD1P29536 600 aaPredicted RBP10.29□□□□□ -0.76
NEK1-207ENST00000511633 GNG11P61952 73 aa10.29□□□□□ -0.76
NEK1-207ENST00000511633 TBC1D5Q92609 795 aa10.29□□□□□ -0.76
NEK1-207ENST00000511633 ZSWIM4Q9H7M6 989 aa10.29□□□□□ -0.76
NEK1-207ENST00000511633 BCCIPQ9P287 314 aaKnown RBP eCLIP10.29□□□□□ -0.76
NEK1-207ENST00000511633 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP10.29□□□□□ -0.762e-6■■□□□ 11.7
NEK1-207ENST00000511633 ERICH4A6NGS2 130 aa10.29□□□□□ -0.76
NEK1-207ENST00000511633 GPAA1O43292 621 aa10.29□□□□□ -0.76
NEK1-207ENST00000511633 HLTFQ14527 1009 aaKnown RBP eCLIP10.29□□□□□ -0.76
NEK1-207ENST00000511633 FAM200AQ8TCP9 573 aa10.29□□□□□ -0.76
NEK1-207ENST00000511633 DRC1Q96MC2 740 aa10.29□□□□□ -0.76
NEK1-207ENST00000511633 PKD2L1Q9P0L9 805 aa10.29□□□□□ -0.76
NEK1-207ENST00000511633 STX17P56962 302 aa10.29□□□□□ -0.76
NEK1-207ENST00000511633 DPP8Q6V1X1 898 aaPredicted RBP10.29□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms