RNA–Protein interactions for RNA: ENST00000511628.1

CHD1-207, Transcript of chromodomain helicase DNA binding protein 1, humanhuman

TSL 3

Gene CHD1, Length 599 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD1-207ENST00000511628 DMRTB1Q96MA1 342 aa5.78□□□□□ -1.48
CHD1-207ENST00000511628 RUSC1Q9BVN2 902 aa5.78□□□□□ -1.48
CHD1-207ENST00000511628 SOX13Q9UN79 622 aa5.78□□□□□ -1.48
CHD1-207ENST00000511628 A0A1W2PP55 124 aa5.77□□□□□ -1.49
CHD1-207ENST00000511628 WISP1O95388 367 aa5.77□□□□□ -1.49
CHD1-207ENST00000511628 GSTM4Q03013 218 aa5.77□□□□□ -1.49
CHD1-207ENST00000511628 ORC1Q13415 861 aa5.77□□□□□ -1.49
CHD1-207ENST00000511628 PRSS36Q5K4E3 855 aa5.77□□□□□ -1.49
CHD1-207ENST00000511628 ADAMTSL4Q6UY14 1074 aa5.77□□□□□ -1.49
CHD1-207ENST00000511628 ZC3HAV1Q7Z2W4 902 aaKnown RBP5.77□□□□□ -1.49
CHD1-207ENST00000511628 BHLHE41Q9C0J9 482 aaPredicted RBP5.77□□□□□ -1.49
CHD1-207ENST00000511628 PPP4R2Q9NY27 417 aa5.77□□□□□ -1.49
CHD1-207ENST00000511628 KCNK4Q9NYG8 393 aa5.77□□□□□ -1.49
CHD1-207ENST00000511628 GNEQ9Y223 722 aaKnown RBP5.77□□□□□ -1.49
CHD1-207ENST00000511628 METTL12A8MUP2 240 aa5.76□□□□□ -1.49
CHD1-207ENST00000511628 PATL2C9JE40 543 aaKnown RBP5.76□□□□□ -1.49
CHD1-207ENST00000511628 EIF1AYO14602 144 aaKnown RBP5.76□□□□□ -1.49
CHD1-207ENST00000511628 DHX15O43143 795 aaKnown RBP5.76□□□□□ -1.49
CHD1-207ENST00000511628 GAS2O43903 313 aaKnown RBP5.76□□□□□ -1.49
CHD1-207ENST00000511628 USPL1Q5W0Q7 1092 aa5.76□□□□□ -1.49
CHD1-207ENST00000511628 AEBP1Q8IUX7 1158 aa5.76□□□□□ -1.49
CHD1-207ENST00000511628 UTP4Q969X6 686 aaKnown RBP5.76□□□□□ -1.49
CHD1-207ENST00000511628 FAM129BQ96TA1 746 aa5.76□□□□□ -1.49
CHD1-207ENST00000511628 RNF208Q9H0X6 261 aa5.76□□□□□ -1.49
CHD1-207ENST00000511628 DNAJC25Q9H1X3 360 aa5.76□□□□□ -1.49
CHD1-207ENST00000511628 NPHS2Q9NP85 383 aa5.76□□□□□ -1.49
CHD1-207ENST00000511628 NLRP2Q9NX02 1062 aa5.76□□□□□ -1.49
CHD1-207ENST00000511628 DCTN4Q9UJW0 460 aa5.76□□□□□ -1.49
CHD1-207ENST00000511628 IVNS1ABPQ9Y6Y0 642 aa5.76□□□□□ -1.49
CHD1-207ENST00000511628 A0A096LPE4 126 aa5.75□□□□□ -1.49
CHD1-207ENST00000511628 A0A1W2PPZ6 126 aa5.75□□□□□ -1.49
CHD1-207ENST00000511628 SOX1O00570 391 aaPredicted RBP5.75□□□□□ -1.49
CHD1-207ENST00000511628 PCDH1Q08174 1060 aa5.75□□□□□ -1.49
CHD1-207ENST00000511628 KCNA1Q09470 495 aa5.75□□□□□ -1.49
CHD1-207ENST00000511628 ECM1Q16610 540 aa5.75□□□□□ -1.49
CHD1-207ENST00000511628 PEAR1Q5VY43 1037 aaPredicted RBP5.75□□□□□ -1.49
CHD1-207ENST00000511628 NUTM2GQ5VZR2 741 aa5.75□□□□□ -1.49
CHD1-207ENST00000511628 ANKRD34AQ69YU3 496 aa5.75□□□□□ -1.49
CHD1-207ENST00000511628 PRR23CQ6ZRP0 262 aa5.75□□□□□ -1.49
CHD1-207ENST00000511628 ZSCAN29Q8IWY8 852 aaPredicted RBP5.75□□□□□ -1.49
CHD1-207ENST00000511628 DZIP1LQ8IYY4 767 aaKnown RBP5.75□□□□□ -1.49
CHD1-207ENST00000511628 FOXD4L4Q8WXT5 416 aaPredicted RBP5.75□□□□□ -1.49
CHD1-207ENST00000511628 CCDC74AQ96AQ1 378 aa5.75□□□□□ -1.49
CHD1-207ENST00000511628 CSRNP1Q96S65 589 aa5.75□□□□□ -1.49
CHD1-207ENST00000511628 SSBP4Q9BWG4 385 aaPredicted RBP5.75□□□□□ -1.49
CHD1-207ENST00000511628 KCNF1Q9H3M0 494 aa5.75□□□□□ -1.49
CHD1-207ENST00000511628 STOML1Q9UBI4 398 aa5.75□□□□□ -1.49
CHD1-207ENST00000511628 GPR182O15218 404 aa5.74□□□□□ -1.49
CHD1-207ENST00000511628 ADAM11O75078 769 aa5.74□□□□□ -1.49
CHD1-207ENST00000511628 ESRRAP11474 423 aaPredicted RBP5.74□□□□□ -1.49
CHD1-207ENST00000511628 RXRBP28702 533 aa5.74□□□□□ -1.49
CHD1-207ENST00000511628 PLCB3Q01970 1234 aa5.74□□□□□ -1.49
CHD1-207ENST00000511628 SPRED3Q2MJR0 410 aa5.74□□□□□ -1.49
CHD1-207ENST00000511628 KIAA1211Q6ZU35 1233 aa5.74□□□□□ -1.49
CHD1-207ENST00000511628 VN1R5Q7Z5H4 357 aa5.74□□□□□ -1.49
CHD1-207ENST00000511628 CCNJLQ8IV13 435 aa5.74□□□□□ -1.49
CHD1-207ENST00000511628 C12orf50Q8NA57 414 aaPredicted RBP5.74□□□□□ -1.49
CHD1-207ENST00000511628 RBCK1Q9BYM8 510 aa5.74□□□□□ -1.49
CHD1-207ENST00000511628 CLEC4MQ9H2X3 399 aaPredicted RBP5.74□□□□□ -1.49
CHD1-207ENST00000511628 ZFYVE1Q9HBF4 777 aa5.74□□□□□ -1.49
CHD1-207ENST00000511628 TRAK1Q9UPV9 953 aa5.74□□□□□ -1.49
CHD1-207ENST00000511628 RAXQ9Y2V3 346 aa5.74□□□□□ -1.49
CHD1-207ENST00000511628 UVSSAQ2YD98 709 aa5.73□□□□□ -1.49
CHD1-207ENST00000511628 HP1BP3Q5SSJ5 553 aaPredicted RBP5.73□□□□□ -1.49
CHD1-207ENST00000511628 HGSNATQ68CP4 663 aa5.73□□□□□ -1.49
CHD1-207ENST00000511628 SOX17Q9H6I2 414 aaPredicted RBP5.73□□□□□ -1.49
CHD1-207ENST00000511628 CYP4F12Q9HCS2 524 aa5.73□□□□□ -1.49
CHD1-207ENST00000511628 GSC2O15499 205 aa5.72□□□□□ -1.49
CHD1-207ENST00000511628 CYP11A1P05108 521 aa5.72□□□□□ -1.49
CHD1-207ENST00000511628 FSTP19883 344 aa5.72□□□□□ -1.49
CHD1-207ENST00000511628 GRIA4P48058 902 aa5.72□□□□□ -1.49
CHD1-207ENST00000511628 USP11P51784 963 aa5.72□□□□□ -1.49
CHD1-207ENST00000511628 KIAA0319Q5VV43 1072 aa5.72□□□□□ -1.49
CHD1-207ENST00000511628 DTHD1Q6ZMT9 781 aa5.72□□□□□ -1.49
CHD1-207ENST00000511628 TMC7Q7Z402 723 aa5.72□□□□□ -1.49
CHD1-207ENST00000511628 UBL7Q96S82 380 aaPredicted RBP5.72□□□□□ -1.49
CHD1-207ENST00000511628 CORO1BQ9BR76 489 aa5.72□□□□□ -1.49
CHD1-207ENST00000511628 RAD18Q9NS91 495 aa5.72□□□□□ -1.49
CHD1-207ENST00000511628 PNMA6FA0A0J9YX94 578 aa5.71□□□□□ -1.5
CHD1-207ENST00000511628 ZBTB7CA1YPR0 619 aa5.71□□□□□ -1.5
CHD1-207ENST00000511628 BMP3P12645 472 aa5.71□□□□□ -1.5
CHD1-207ENST00000511628 MAPK8P45983 427 aa5.71□□□□□ -1.5
CHD1-207ENST00000511628 HNRNPUQ00839 825 aaKnown RBP eCLIP5.71□□□□□ -1.5
CHD1-207ENST00000511628 ATP2B2Q01814 1243 aa5.71□□□□□ -1.5
CHD1-207ENST00000511628 POU4F3Q15319 338 aa5.71□□□□□ -1.5
CHD1-207ENST00000511628 Q6ZS46 218 aa5.71□□□□□ -1.5
CHD1-207ENST00000511628 EPS8L3Q8TE67 593 aaKnown RBP5.71□□□□□ -1.5
CHD1-207ENST00000511628 ALKBH8Q96BT7 664 aaKnown RBP5.71□□□□□ -1.5
CHD1-207ENST00000511628 TCF12Q99081 682 aa5.71□□□□□ -1.5
CHD1-207ENST00000511628 LOC100289279A0A1B0GTE1 492 aa5.7□□□□□ -1.5
CHD1-207ENST00000511628 PREPP48147 710 aa5.7□□□□□ -1.5
CHD1-207ENST00000511628 FCGRTP55899 365 aa5.7□□□□□ -1.5
CHD1-207ENST00000511628 PDE3AQ14432 1141 aa5.7□□□□□ -1.5
CHD1-207ENST00000511628 EXOSC6Q5RKV6 272 aaKnown RBP5.7□□□□□ -1.5
CHD1-207ENST00000511628 NBPF11Q86T75 865 aa5.7□□□□□ -1.5
CHD1-207ENST00000511628 MYRFLQ96LU7 910 aa5.7□□□□□ -1.5
CHD1-207ENST00000511628 TMEM238LA0A1B0GVL6 79 aa5.69□□□□□ -1.5
CHD1-207ENST00000511628 MEGF11A6BM72 1044 aa5.69□□□□□ -1.5
CHD1-207ENST00000511628 MAOBP27338 520 aa5.69□□□□□ -1.5
CHD1-207ENST00000511628 PPP2R3AQ06190 1150 aa5.69□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 16.2 ms