RNA–Protein interactions for RNA: ENST00000511281.1

HMGB1P47-201, Transcript of high mobility group box 1 pseudogene 47, humanhuman

BASIC

Gene HMGB1P47, Length 589 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P47-201ENST00000511281 TNFRSF25Q93038 417 aa8.2□□□□□ -1.1
HMGB1P47-201ENST00000511281 GTPBP3Q969Y2 492 aaKnown RBP8.2□□□□□ -1.1
HMGB1P47-201ENST00000511281 GINM1Q9NU53 330 aa8.2□□□□□ -1.1
HMGB1P47-201ENST00000511281 DACH1Q9UI36 760 aa8.2□□□□□ -1.1
HMGB1P47-201ENST00000511281 TLR6Q9Y2C9 796 aa8.2□□□□□ -1.1
HMGB1P47-201ENST00000511281 TBX22Q9Y458 520 aa8.2□□□□□ -1.1
HMGB1P47-201ENST00000511281 SCARA3Q6AZY7 606 aa8.19□□□□□ -1.1
HMGB1P47-201ENST00000511281 ZNF746Q6NUN9 644 aaPredicted RBP8.19□□□□□ -1.1
HMGB1P47-201ENST00000511281 RAB44Q7Z6P3 723 aaPredicted RBP8.19□□□□□ -1.1
HMGB1P47-201ENST00000511281 PMFBP1Q8TBY8 1022 aa8.19□□□□□ -1.1
HMGB1P47-201ENST00000511281 NANOS1Q8WY41 292 aaKnown RBP8.19□□□□□ -1.1
HMGB1P47-201ENST00000511281 MDFIQ99750 246 aa8.19□□□□□ -1.1
HMGB1P47-201ENST00000511281 RASSF4Q9H2L5 321 aa8.19□□□□□ -1.1
HMGB1P47-201ENST00000511281 PIF1Q9H611 641 aa8.19□□□□□ -1.1
HMGB1P47-201ENST00000511281 ZNF408Q9H9D4 720 aa8.19□□□□□ -1.1
HMGB1P47-201ENST00000511281 TMEM39AQ9NV64 488 aa8.19□□□□□ -1.1
HMGB1P47-201ENST00000511281 EFR3BQ9Y2G0 817 aa8.19□□□□□ -1.1
HMGB1P47-201ENST00000511281 SSBP05455 408 aaKnown RBP eCLIP8.18□□□□□ -1.1
HMGB1P47-201ENST00000511281 CTBSQ01459 385 aa8.18□□□□□ -1.1
HMGB1P47-201ENST00000511281 MAP3K11Q16584 847 aa8.18□□□□□ -1.1
HMGB1P47-201ENST00000511281 PCNX4Q63HM2 1172 aa8.18□□□□□ -1.1
HMGB1P47-201ENST00000511281 BSNDQ8WZ55 320 aa8.18□□□□□ -1.1
HMGB1P47-201ENST00000511281 POP1Q99575 1024 aaKnown RBP8.18□□□□□ -1.1
HMGB1P47-201ENST00000511281 CLEC4MQ9H2X3 399 aaPredicted RBP8.18□□□□□ -1.1
HMGB1P47-201ENST00000511281 ZSWIM4Q9H7M6 989 aa8.18□□□□□ -1.1
HMGB1P47-201ENST00000511281 DNAJB12Q9NXW2 375 aaKnown RBP8.18□□□□□ -1.1
HMGB1P47-201ENST00000511281 F6X3S4 739 aa8.17□□□□□ -1.1
HMGB1P47-201ENST00000511281 PAGE1O75459 146 aa8.17□□□□□ -1.1
HMGB1P47-201ENST00000511281 B3GALT4O96024 378 aa8.17□□□□□ -1.1
HMGB1P47-201ENST00000511281 ATP11AP98196 1134 aa8.17□□□□□ -1.1
HMGB1P47-201ENST00000511281 NFE2L2Q16236 605 aa8.17□□□□□ -1.1
HMGB1P47-201ENST00000511281 GOLM1Q8NBJ4 401 aa8.17□□□□□ -1.1
HMGB1P47-201ENST00000511281 TRERF1Q96PN7 1200 aa8.17□□□□□ -1.1
HMGB1P47-201ENST00000511281 ADAM19Q9H013 955 aa8.17□□□□□ -1.1
HMGB1P47-201ENST00000511281 MUC3BQ9H195 1237 aa8.17□□□□□ -1.1
HMGB1P47-201ENST00000511281 RBSNQ9H1K0 784 aa8.17□□□□□ -1.1
HMGB1P47-201ENST00000511281 UBP1Q9NZI7 540 aa8.17□□□□□ -1.1
HMGB1P47-201ENST00000511281 SOX13Q9UN79 622 aa8.17□□□□□ -1.1
HMGB1P47-201ENST00000511281 FAM221AA4D161 298 aa8.16□□□□□ -1.1
HMGB1P47-201ENST00000511281 ADARB2-AS1A8MUL3 147 aa8.16□□□□□ -1.1
HMGB1P47-201ENST00000511281 J3QW42 95 aa8.16□□□□□ -1.1
HMGB1P47-201ENST00000511281 KLF4O43474 513 aa8.16□□□□□ -1.1
HMGB1P47-201ENST00000511281 SMNDC1O75940 238 aaKnown RBP eCLIP8.16□□□□□ -1.1
HMGB1P47-201ENST00000511281 GHRHP01286 108 aa8.16□□□□□ -1.1
HMGB1P47-201ENST00000511281 BMP6P22004 513 aa8.16□□□□□ -1.1
HMGB1P47-201ENST00000511281 CRKP46108 304 aa8.16□□□□□ -1.1
HMGB1P47-201ENST00000511281 FAM160A1Q05DH4 1040 aa8.16□□□□□ -1.1
HMGB1P47-201ENST00000511281 PPP2R3AQ06190 1150 aa8.16□□□□□ -1.1
HMGB1P47-201ENST00000511281 SNAP47Q5SQN1 464 aa8.16□□□□□ -1.1
HMGB1P47-201ENST00000511281 FOXR1Q6PIV2 292 aa8.16□□□□□ -1.1
HMGB1P47-201ENST00000511281 SYT9Q86SS6 491 aa8.16□□□□□ -1.1
HMGB1P47-201ENST00000511281 FRRS1LQ9P0K9 344 aa8.16□□□□□ -1.1
HMGB1P47-201ENST00000511281 CYP8B1Q9UNU6 501 aa8.16□□□□□ -1.1
HMGB1P47-201ENST00000511281 SAMM50Q9Y512 469 aa8.16□□□□□ -1.1
HMGB1P47-201ENST00000511281 NME2P22392 152 aa8.15□□□□□ -1.1
HMGB1P47-201ENST00000511281 APOBRQ0VD83 1088 aa8.15□□□□□ -1.1
HMGB1P47-201ENST00000511281 VN1R5Q7Z5H4 357 aa8.15□□□□□ -1.1
HMGB1P47-201ENST00000511281 ASAP3Q8TDY4 903 aa8.15□□□□□ -1.1
HMGB1P47-201ENST00000511281 GATAD2BQ8WXI9 593 aa8.15□□□□□ -1.1
HMGB1P47-201ENST00000511281 TTC9Q92623 222 aa8.15□□□□□ -1.1
HMGB1P47-201ENST00000511281 SIRPGQ9P1W8 387 aa8.15□□□□□ -1.1
HMGB1P47-201ENST00000511281 GPN3Q9UHW5 284 aaPredicted RBP8.15□□□□□ -1.1
HMGB1P47-201ENST00000511281 PRR12Q9ULL5 1215 aa8.15□□□□□ -1.1
HMGB1P47-201ENST00000511281 C2CD2LO14523 706 aa8.14□□□□□ -1.11
HMGB1P47-201ENST00000511281 ETFBP38117 255 aa8.14□□□□□ -1.11
HMGB1P47-201ENST00000511281 MLLT1Q03111 559 aaPredicted RBP8.14□□□□□ -1.11
HMGB1P47-201ENST00000511281 PCDH1Q08174 1060 aa8.14□□□□□ -1.11
HMGB1P47-201ENST00000511281 MPP2Q14168 576 aa8.14□□□□□ -1.11
HMGB1P47-201ENST00000511281 LRP10Q7Z4F1 713 aa8.14□□□□□ -1.11
HMGB1P47-201ENST00000511281 CACTIN-AS1Q8N1I8 211 aa8.14□□□□□ -1.11
HMGB1P47-201ENST00000511281 NKD1Q969G9 470 aa8.14□□□□□ -1.11
HMGB1P47-201ENST00000511281 SHDQ96IW2 340 aa8.14□□□□□ -1.11
HMGB1P47-201ENST00000511281 UBE2OQ9C0C9 1292 aaKnown RBP8.14□□□□□ -1.11
HMGB1P47-201ENST00000511281 PRKAG3Q9UGI9 489 aa8.14□□□□□ -1.11
HMGB1P47-201ENST00000511281 SLC6A14Q9UN76 642 aa8.14□□□□□ -1.11
HMGB1P47-201ENST00000511281 CDK11AQ9UQ88 783 aaPredicted RBP8.14□□□□□ -1.11
HMGB1P47-201ENST00000511281 PPFIA3O75145 1194 aa8.13□□□□□ -1.11
HMGB1P47-201ENST00000511281 CILPO75339 1184 aa8.13□□□□□ -1.11
HMGB1P47-201ENST00000511281 F13A1P00488 732 aa8.13□□□□□ -1.11
HMGB1P47-201ENST00000511281 ARAFP10398 606 aa8.13□□□□□ -1.11
HMGB1P47-201ENST00000511281 PTPRAP18433 802 aa8.13□□□□□ -1.11
HMGB1P47-201ENST00000511281 NCLP19338 710 aaKnown RBP8.13□□□□□ -1.11
HMGB1P47-201ENST00000511281 EIF2AK2P19525 551 aaKnown RBP8.13□□□□□ -1.11
HMGB1P47-201ENST00000511281 RAB33AQ14088 237 aa8.13□□□□□ -1.11
HMGB1P47-201ENST00000511281 LRRC14Q15048 493 aa8.13□□□□□ -1.11
HMGB1P47-201ENST00000511281 ZNF423Q2M1K9 1284 aa8.13□□□□□ -1.11
HMGB1P47-201ENST00000511281 SDE2Q6IQ49 451 aa8.13□□□□□ -1.11
HMGB1P47-201ENST00000511281 REXO1Q8N1G1 1221 aaKnown RBP8.13□□□□□ -1.11
HMGB1P47-201ENST00000511281 PLD4Q96BZ4 506 aa8.13□□□□□ -1.11
HMGB1P47-201ENST00000511281 SRRTQ9BXP5 876 aaKnown RBP8.13□□□□□ -1.11
HMGB1P47-201ENST00000511281 MIR1-1HGQ9H1L0 117 aa8.13□□□□□ -1.11
HMGB1P47-201ENST00000511281 K7ELQ4 463 aaPredicted RBP8.12□□□□□ -1.11
HMGB1P47-201ENST00000511281 TNNI3KQ59H18 835 aa8.12□□□□□ -1.11
HMGB1P47-201ENST00000511281 RASIP1Q5U651 963 aa8.12□□□□□ -1.11
HMGB1P47-201ENST00000511281 CEP135Q66GS9 1140 aa8.12□□□□□ -1.11
HMGB1P47-201ENST00000511281 BNC2Q6ZN30 1099 aaPredicted RBP8.12□□□□□ -1.11
HMGB1P47-201ENST00000511281 HFE2Q6ZVN8 426 aa8.12□□□□□ -1.11
HMGB1P47-201ENST00000511281 ANKS3Q6ZW76 656 aa8.12□□□□□ -1.11
HMGB1P47-201ENST00000511281 NLGN1Q8N2Q7 840 aa8.12□□□□□ -1.11
HMGB1P47-201ENST00000511281 CACNA2D2Q9NY47 1150 aa8.12□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms