RNA–Protein interactions for RNA: ENST00000511263.1

HMGB3P13-201, Transcript of high mobility group box 3 pseudogene 13, humanhuman

BASIC

Gene HMGB3P13, Length 607 nt, Biotype processed pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P13-201ENST00000511263 CSRNP1Q96S65 589 aa7.24□□□□□ -1.25
HMGB3P13-201ENST00000511263 GPR182O15218 404 aa7.23□□□□□ -1.25
HMGB3P13-201ENST00000511263 ATP11AP98196 1134 aa7.23□□□□□ -1.25
HMGB3P13-201ENST00000511263 COL19A1Q14993 1142 aa7.23□□□□□ -1.25
HMGB3P13-201ENST00000511263 COL13A1Q5TAT6 717 aaPredicted RBP7.23□□□□□ -1.25
HMGB3P13-201ENST00000511263 MCTP1Q6DN14 999 aa7.23□□□□□ -1.25
HMGB3P13-201ENST00000511263 ALG1LQ6GMV1 187 aa7.23□□□□□ -1.25
HMGB3P13-201ENST00000511263 DZIP1LQ8IYY4 767 aaKnown RBP7.23□□□□□ -1.25
HMGB3P13-201ENST00000511263 DDX54Q8TDD1 881 aaKnown RBP7.23□□□□□ -1.25
HMGB3P13-201ENST00000511263 BSNDQ8WZ55 320 aa7.23□□□□□ -1.25
HMGB3P13-201ENST00000511263 WNT8BQ93098 351 aa7.23□□□□□ -1.25
HMGB3P13-201ENST00000511263 GZF1Q9H116 711 aaPredicted RBP7.23□□□□□ -1.25
HMGB3P13-201ENST00000511263 PCMTD2Q9NV79 361 aa7.23□□□□□ -1.25
HMGB3P13-201ENST00000511263 FSTP19883 344 aa7.22□□□□□ -1.25
HMGB3P13-201ENST00000511263 SSTR4P31391 388 aa7.22□□□□□ -1.25
HMGB3P13-201ENST00000511263 KLHL23Q8NBE8 558 aa7.22□□□□□ -1.25
HMGB3P13-201ENST00000511263 LACRTQ9GZZ8 138 aa7.22□□□□□ -1.25
HMGB3P13-201ENST00000511263 ADAM19Q9H013 955 aa7.22□□□□□ -1.25
HMGB3P13-201ENST00000511263 AKTIPQ9H8T0 292 aa7.22□□□□□ -1.25
HMGB3P13-201ENST00000511263 GOLGA2P5Q9HBQ8 144 aa7.22□□□□□ -1.25
HMGB3P13-201ENST00000511263 TRIM33Q9UPN9 1127 aa7.22□□□□□ -1.25
HMGB3P13-201ENST00000511263 GADD45BO75293 160 aaPredicted RBP7.21□□□□□ -1.26
HMGB3P13-201ENST00000511263 MAPK8P45983 427 aa7.21□□□□□ -1.26
HMGB3P13-201ENST00000511263 HNRNPUQ00839 825 aaKnown RBP eCLIP7.21□□□□□ -1.26
HMGB3P13-201ENST00000511263 ORC1Q13415 861 aa7.21□□□□□ -1.26
HMGB3P13-201ENST00000511263 KIAA0319Q5VV43 1072 aa7.21□□□□□ -1.26
HMGB3P13-201ENST00000511263 CCDC74AQ96AQ1 378 aa7.21□□□□□ -1.26
HMGB3P13-201ENST00000511263 ZKSCAN3Q9BRR0 538 aa7.21□□□□□ -1.26
HMGB3P13-201ENST00000511263 BHLHE41Q9C0J9 482 aaPredicted RBP7.21□□□□□ -1.26
HMGB3P13-201ENST00000511263 EHD4Q9H223 541 aa7.21□□□□□ -1.26
HMGB3P13-201ENST00000511263 F8W735 103 aaPredicted RBP7.2□□□□□ -1.26
HMGB3P13-201ENST00000511263 H3BRJ5 948 aa7.2□□□□□ -1.26
HMGB3P13-201ENST00000511263 GIPC1O14908 333 aa7.2□□□□□ -1.26
HMGB3P13-201ENST00000511263 PIP4K2BP78356 416 aa7.2□□□□□ -1.26
HMGB3P13-201ENST00000511263 AGGF1Q8N302 714 aaeCLIP7.2□□□□□ -1.26
HMGB3P13-201ENST00000511263 ASAP3Q8TDY4 903 aa7.2□□□□□ -1.26
HMGB3P13-201ENST00000511263 NXPE3Q969Y0 559 aa7.2□□□□□ -1.26
HMGB3P13-201ENST00000511263 FRMD6Q96NE9 622 aa7.2□□□□□ -1.26
HMGB3P13-201ENST00000511263 POP1Q99575 1024 aaKnown RBP7.2□□□□□ -1.26
HMGB3P13-201ENST00000511263 SRCIN1Q9C0H9 1055 aa7.2□□□□□ -1.26
HMGB3P13-201ENST00000511263 LIN7BQ9HAP6 207 aa7.2□□□□□ -1.26
HMGB3P13-201ENST00000511263 OSGEPQ9NPF4 335 aa7.2□□□□□ -1.26
HMGB3P13-201ENST00000511263 PNMA6FA0A0J9YX94 578 aa7.19□□□□□ -1.26
HMGB3P13-201ENST00000511263 MED26O95402 600 aa7.19□□□□□ -1.26
HMGB3P13-201ENST00000511263 XRCC5P13010 732 aaKnown RBP7.19□□□□□ -1.26
HMGB3P13-201ENST00000511263 DSC3Q14574 896 aa7.19□□□□□ -1.26
HMGB3P13-201ENST00000511263 ENOX2Q16206 610 aaKnown RBP7.19□□□□□ -1.26
HMGB3P13-201ENST00000511263 MRPL18Q9H0U6 180 aaKnown RBP7.19□□□□□ -1.26
HMGB3P13-201ENST00000511263 SPG7Q9UQ90 795 aa7.19□□□□□ -1.26
HMGB3P13-201ENST00000511263 A0A1W2PP55 124 aa7.18□□□□□ -1.26
HMGB3P13-201ENST00000511263 IGHA2P01877 340 aa7.18□□□□□ -1.26
HMGB3P13-201ENST00000511263 POLR3DP05423 398 aaPredicted RBP7.18□□□□□ -1.26
HMGB3P13-201ENST00000511263 CD97P48960 835 aa7.18□□□□□ -1.26
HMGB3P13-201ENST00000511263 PTPN12Q05209 780 aaKnown RBP7.18□□□□□ -1.26
HMGB3P13-201ENST00000511263 FMR1Q06787 632 aaKnown RBP eCLIP7.18□□□□□ -1.26
HMGB3P13-201ENST00000511263 IKBKEQ14164 716 aa7.18□□□□□ -1.26
HMGB3P13-201ENST00000511263 SETDB1Q15047 1291 aa7.18□□□□□ -1.26
HMGB3P13-201ENST00000511263 HP1BP3Q5SSJ5 553 aaPredicted RBP7.18□□□□□ -1.26
HMGB3P13-201ENST00000511263 TMCO4Q5TGY1 634 aa7.18□□□□□ -1.26
HMGB3P13-201ENST00000511263 CCNJLQ8IV13 435 aa7.18□□□□□ -1.26
HMGB3P13-201ENST00000511263 TMEM130Q8N3G9 435 aa7.18□□□□□ -1.26
HMGB3P13-201ENST00000511263 NPHS2Q9NP85 383 aa7.18□□□□□ -1.26
HMGB3P13-201ENST00000511263 SEC31BQ9NQW1 1179 aa7.18□□□□□ -1.26
HMGB3P13-201ENST00000511263 CCDC180Q9P1Z9 1646 aa7.17□□□□□ -1.26
HMGB3P13-201ENST00000511263 NFKBIEO00221 500 aa7.17□□□□□ -1.26
HMGB3P13-201ENST00000511263 EAPPQ56P03 285 aaPredicted RBP7.17□□□□□ -1.26
HMGB3P13-201ENST00000511263 PEAR1Q5VY43 1037 aaPredicted RBP7.17□□□□□ -1.26
HMGB3P13-201ENST00000511263 Q6ZS46 218 aa7.17□□□□□ -1.26
HMGB3P13-201ENST00000511263 A0A096LPE4 126 aa7.16□□□□□ -1.26
HMGB3P13-201ENST00000511263 A0A1W2PPZ6 126 aa7.16□□□□□ -1.26
HMGB3P13-201ENST00000511263 ANKRD33BA6NCL7 494 aa7.16□□□□□ -1.26
HMGB3P13-201ENST00000511263 BTBD11A6QL63 1104 aa7.16□□□□□ -1.26
HMGB3P13-201ENST00000511263 LINC01387J3KSC0 135 aa7.16□□□□□ -1.26
HMGB3P13-201ENST00000511263 FSCN2O14926 492 aa7.16□□□□□ -1.26
HMGB3P13-201ENST00000511263 UBL7Q96S82 380 aaPredicted RBP7.16□□□□□ -1.26
HMGB3P13-201ENST00000511263 CLEC4MQ9H2X3 399 aaPredicted RBP7.16□□□□□ -1.26
HMGB3P13-201ENST00000511263 SOX17Q9H6I2 414 aaPredicted RBP7.16□□□□□ -1.26
HMGB3P13-201ENST00000511263 SOX13Q9UN79 622 aa7.16□□□□□ -1.26
HMGB3P13-201ENST00000511263 COL17A1Q9UMD9 1497 aaPredicted RBP7.16□□□□□ -1.26
HMGB3P13-201ENST00000511263 KRTAP4-8A0A0G2JLE6 195 aa7.15□□□□□ -1.26
HMGB3P13-201ENST00000511263 GLB1P16278 677 aa7.15□□□□□ -1.26
HMGB3P13-201ENST00000511263 CD68P34810 354 aaPredicted RBP7.15□□□□□ -1.26
HMGB3P13-201ENST00000511263 C19orf57Q0VDD7 668 aa7.15□□□□□ -1.26
HMGB3P13-201ENST00000511263 RPS26P11Q5JNZ5 115 aaPredicted RBP7.15□□□□□ -1.26
HMGB3P13-201ENST00000511263 USPL1Q5W0Q7 1092 aa7.15□□□□□ -1.26
HMGB3P13-201ENST00000511263 PRPF40BQ6NWY9 871 aaKnown RBP7.15□□□□□ -1.26
HMGB3P13-201ENST00000511263 GALNT11Q8NCW6 608 aa7.15□□□□□ -1.26
HMGB3P13-201ENST00000511263 SH2B1Q9NRF2 756 aaPredicted RBP7.15□□□□□ -1.26
HMGB3P13-201ENST00000511263 WISP1O95388 367 aa7.14□□□□□ -1.27
HMGB3P13-201ENST00000511263 TGFB1P01137 390 aa7.14□□□□□ -1.27
HMGB3P13-201ENST00000511263 LDHBP07195 334 aaKnown RBP7.14□□□□□ -1.27
HMGB3P13-201ENST00000511263 EPHA1P21709 976 aa7.14□□□□□ -1.27
HMGB3P13-201ENST00000511263 DTHD1Q6ZMT9 781 aa7.14□□□□□ -1.27
HMGB3P13-201ENST00000511263 LATS2Q9NRM7 1088 aa7.14□□□□□ -1.27
HMGB3P13-201ENST00000511263 PRPF40AO75400 957 aaKnown RBP7.13□□□□□ -1.27
HMGB3P13-201ENST00000511263 ACPPP15309 386 aa7.13□□□□□ -1.27
HMGB3P13-201ENST00000511263 CDC25BP30305 580 aa7.13□□□□□ -1.27
HMGB3P13-201ENST00000511263 TRIM26Q12899 539 aaPredicted RBP7.13□□□□□ -1.27
HMGB3P13-201ENST00000511263 LARP7Q4G0J3 582 aaKnown RBP eCLIP7.13□□□□□ -1.27
HMGB3P13-201ENST00000511263 TXNDC11Q6PKC3 985 aa7.13□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 41.6 ms